RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 DNAL4O96015 105 aa11.51□□□□□ -0.57
SEMA3B-207ENST00000441915 ATP5G1P05496 136 aa11.51□□□□□ -0.57
SEMA3B-207ENST00000441915 INAFM2P0DMQ5 153 aa11.51□□□□□ -0.57
SEMA3B-207ENST00000441915 SMIM11BQ8TCY0 68 aa11.51□□□□□ -0.57
SEMA3B-207ENST00000441915 KLK5Q9Y337 293 aaPredicted RBP11.51□□□□□ -0.57
SEMA3B-207ENST00000441915 C22orf24Q9Y442 160 aa11.51□□□□□ -0.57
SEMA3B-207ENST00000441915 ANK3Q12955 4377 aaKnown RBP11.51□□□□□ -0.57
SEMA3B-207ENST00000441915 MALP21145 153 aa11.51□□□□□ -0.57
SEMA3B-207ENST00000441915 C6orf226Q5I0X4 101 aa11.51□□□□□ -0.57
SEMA3B-207ENST00000441915 LINC00643Q86TS7 51 aa11.5□□□□□ -0.57
SEMA3B-207ENST00000441915 GYPEP15421 78 aa11.5□□□□□ -0.57
SEMA3B-207ENST00000441915 H0YGX0 51 aa11.49□□□□□ -0.57
SEMA3B-207ENST00000441915 PAX4O43316 350 aa11.49□□□□□ -0.57
SEMA3B-207ENST00000441915 HILS1P60008 231 aa11.49□□□□□ -0.57
SEMA3B-207ENST00000441915 SMCR5Q8TEV8 140 aa11.49□□□□□ -0.57
SEMA3B-207ENST00000441915 FN1P02751 2386 aaKnown RBP11.48□□□□□ -0.57
SEMA3B-207ENST00000441915 WIPF1O43516 503 aa11.48□□□□□ -0.57
SEMA3B-207ENST00000441915 XCL1P47992 114 aa11.48□□□□□ -0.57
SEMA3B-207ENST00000441915 RPS28P62857 69 aaKnown RBP11.48□□□□□ -0.57
SEMA3B-207ENST00000441915 SS18Q15532 418 aa11.48□□□□□ -0.57
SEMA3B-207ENST00000441915 LINC00612Q8N6U2 182 aa11.48□□□□□ -0.57
SEMA3B-207ENST00000441915 COX7CP15954 63 aa11.47□□□□□ -0.57
SEMA3B-207ENST00000441915 A0A087WYN8 130 aa11.47□□□□□ -0.57
SEMA3B-207ENST00000441915 A0A1B0GUV1 79 aa11.47□□□□□ -0.57
SEMA3B-207ENST00000441915 C11orf68Q9H3H3 251 aaKnown RBP11.47□□□□□ -0.57
SEMA3B-207ENST00000441915 GAGE2AQ6NT46 116 aa11.46□□□□□ -0.57
SEMA3B-207ENST00000441915 OR13C6PQ8NH95 151 aa11.46□□□□□ -0.57
SEMA3B-207ENST00000441915 PDZD2O15018 2839 aa11.45□□□□□ -0.58
SEMA3B-207ENST00000441915 PRO0255Q9UI72 69 aa11.45□□□□□ -0.58
SEMA3B-207ENST00000441915 CRYGAP11844 174 aa11.44□□□□□ -0.58
SEMA3B-207ENST00000441915 SDIM1Q6ZPB5 146 aa11.44□□□□□ -0.58
SEMA3B-207ENST00000441915 CXCL5P42830 114 aa11.44□□□□□ -0.58
SEMA3B-207ENST00000441915 Q8IZM0 81 aa11.44□□□□□ -0.58
SEMA3B-207ENST00000441915 C2orf48Q96LS8 159 aa11.44□□□□□ -0.58
SEMA3B-207ENST00000441915 TENM4Q6N022 2769 aa11.43□□□□□ -0.58
SEMA3B-207ENST00000441915 CLPSL2Q6UWE3 100 aa11.43□□□□□ -0.58
SEMA3B-207ENST00000441915 X6R8D5 127 aa11.43□□□□□ -0.58
SEMA3B-207ENST00000441915 A0A096LPF7 62 aa11.43□□□□□ -0.58
SEMA3B-207ENST00000441915 LECT2O14960 151 aa11.42□□□□□ -0.58
SEMA3B-207ENST00000441915 LINC00482Q8N8I6 264 aa11.41□□□□□ -0.58
SEMA3B-207ENST00000441915 GCN1Q92616 2671 aaKnown RBP11.41□□□□□ -0.58
SEMA3B-207ENST00000441915 ITPR2Q14571 2701 aa11.41□□□□□ -0.58
SEMA3B-207ENST00000441915 LINC01561Q8N1V8 128 aa11.4□□□□□ -0.58
SEMA3B-207ENST00000441915 LY6G6DO95868 133 aa11.4□□□□□ -0.58
SEMA3B-207ENST00000441915 KRTAP10-3P60369 221 aa11.39□□□□□ -0.59
SEMA3B-207ENST00000441915 hADV29S1A0JD25 119 aa11.39□□□□□ -0.59
SEMA3B-207ENST00000441915 ATOX1O00244 68 aa11.39□□□□□ -0.59
SEMA3B-207ENST00000441915 C14orf132Q9NPU4 83 aa11.38□□□□□ -0.59
SEMA3B-207ENST00000441915 NBEAL2Q6ZNJ1 2754 aa11.38□□□□□ -0.59
SEMA3B-207ENST00000441915 C9orf129Q5T035 196 aaKnown RBP11.38□□□□□ -0.59
SEMA3B-207ENST00000441915 HIVEP2P31629 2446 aa11.38□□□□□ -0.59
SEMA3B-207ENST00000441915 LYRM9A8MSI8 78 aa11.37□□□□□ -0.59
SEMA3B-207ENST00000441915 HIST1H4AP62805 103 aaKnown RBP11.37□□□□□ -0.59
SEMA3B-207ENST00000441915 LINC00269Q8N2A0 174 aa11.37□□□□□ -0.59
SEMA3B-207ENST00000441915 CD164L2Q6UWJ8 174 aa11.37□□□□□ -0.59
SEMA3B-207ENST00000441915 OBSCN-AS1Q96MR7 158 aa11.36□□□□□ -0.59
SEMA3B-207ENST00000441915 ORMDL1Q9P0S3 153 aa11.36□□□□□ -0.59
SEMA3B-207ENST00000441915 SLPIP03973 132 aa11.35□□□□□ -0.59
SEMA3B-207ENST00000441915 COX17Q14061 63 aa11.35□□□□□ -0.59
SEMA3B-207ENST00000441915 DPH3Q96FX2 82 aa11.35□□□□□ -0.59
SEMA3B-207ENST00000441915 CHCHD10Q8WYQ3 142 aaPredicted RBP11.34□□□□□ -0.59
SEMA3B-207ENST00000441915 CYSTM1Q9H1C7 97 aa11.34□□□□□ -0.59
SEMA3B-207ENST00000441915 ANGP03950 147 aaKnown RBP11.34□□□□□ -0.59
SEMA3B-207ENST00000441915 TMEM258P61165 79 aa11.34□□□□□ -0.59
SEMA3B-207ENST00000441915 KIAA0087Q14695 138 aa11.34□□□□□ -0.59
SEMA3B-207ENST00000441915 SMR3AQ99954 134 aa11.33□□□□□ -0.6
SEMA3B-207ENST00000441915 IGLV10-54A0A075B6I4 117 aa11.33□□□□□ -0.6
SEMA3B-207ENST00000441915 NCR3O14931 201 aa11.33□□□□□ -0.6
SEMA3B-207ENST00000441915 NDUFC2O95298 119 aa11.33□□□□□ -0.6
SEMA3B-207ENST00000441915 REG3AQ06141 175 aa11.33□□□□□ -0.6
SEMA3B-207ENST00000441915 DEFB135Q30KP9 77 aa11.33□□□□□ -0.6
SEMA3B-207ENST00000441915 DEFB4AO15263 64 aa11.32□□□□□ -0.6
SEMA3B-207ENST00000441915 PRR3P79522 188 aaKnown RBP11.32□□□□□ -0.6
SEMA3B-207ENST00000441915 C9orf66Q5T8R8 295 aa11.32□□□□□ -0.6
SEMA3B-207ENST00000441915 RPL18AQ02543 176 aaKnown RBP11.31□□□□□ -0.6
SEMA3B-207ENST00000441915 IGHV4-28A0A0C4DH34 117 aa11.3□□□□□ -0.6
SEMA3B-207ENST00000441915 NANOS2P60321 138 aaKnown RBP11.3□□□□□ -0.6
SEMA3B-207ENST00000441915 DAD1P61803 113 aa11.3□□□□□ -0.6
SEMA3B-207ENST00000441915 Q8N3U1 123 aa11.29□□□□□ -0.6
SEMA3B-207ENST00000441915 UNC79Q9P2D8 2635 aa11.29□□□□□ -0.6
SEMA3B-207ENST00000441915 LINC00846Q9NV44 126 aa11.29□□□□□ -0.6
SEMA3B-207ENST00000441915 APOC4P55056 127 aa11.29□□□□□ -0.6
SEMA3B-207ENST00000441915 Q8N814 137 aa11.29□□□□□ -0.6
SEMA3B-207ENST00000441915 C9orf116Q5BN46 136 aaPredicted RBP11.28□□□□□ -0.6
SEMA3B-207ENST00000441915 LINC00167Q96N53 147 aa11.28□□□□□ -0.6
SEMA3B-207ENST00000441915 VWFP04275 2813 aa11.28□□□□□ -0.6
SEMA3B-207ENST00000441915 OXTP01178 125 aa11.28□□□□□ -0.6
SEMA3B-207ENST00000441915 SPATA3Q8NHX4 192 aa11.28□□□□□ -0.6
SEMA3B-207ENST00000441915 C4orf26Q17RF5 130 aa11.27□□□□□ -0.61
SEMA3B-207ENST00000441915 SERP2Q8N6R1 65 aa11.27□□□□□ -0.61
SEMA3B-207ENST00000441915 DSCR8Q96T75 97 aa11.27□□□□□ -0.61
SEMA3B-207ENST00000441915 UPK3BQ9BT76 320 aa11.27□□□□□ -0.61
SEMA3B-207ENST00000441915 JMJD7-PLA2G4BH0Y9G9 81 aa11.26□□□□□ -0.61
SEMA3B-207ENST00000441915 TMEM256-PLSCR3K7ERE1 68 aa11.26□□□□□ -0.61
SEMA3B-207ENST00000441915 J3QKU1 62 aa11.26□□□□□ -0.61
SEMA3B-207ENST00000441915 Q6JHZ5 121 aa11.25□□□□□ -0.61
SEMA3B-207ENST00000441915 HELZ2Q9BYK8 2649 aaKnown RBP11.25□□□□□ -0.61
SEMA3B-207ENST00000441915 FASNP49327 2511 aaKnown RBP11.25□□□□□ -0.61
SEMA3B-207ENST00000441915 IGKV3D-7A0A0C4DH55 119 aa11.24□□□□□ -0.61
SEMA3B-207ENST00000441915 CCKP06307 115 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms