RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 FAM19A1Q7Z5A9 133 aa7.07□□□□□ -1.28
CDC42SE1-202ENST00000439374 SPANXA1Q9NS26 97 aa7.07□□□□□ -1.28
CDC42SE1-202ENST00000439374 J3KT08 172 aa7.07□□□□□ -1.28
CDC42SE1-202ENST00000439374 SNURFQ9Y675 71 aa7.07□□□□□ -1.28
CDC42SE1-202ENST00000439374 NOTCH1P46531 2555 aa7.06□□□□□ -1.28
CDC42SE1-202ENST00000439374 NDUFA1O15239 70 aa7.06□□□□□ -1.28
CDC42SE1-202ENST00000439374 Q6Q795 121 aa7.06□□□□□ -1.28
CDC42SE1-202ENST00000439374 MAST4O15021 2626 aa7.06□□□□□ -1.28
CDC42SE1-202ENST00000439374 K7EQD1 137 aa7.06□□□□□ -1.28
CDC42SE1-202ENST00000439374 C9orf116Q5BN46 136 aaPredicted RBP7.06□□□□□ -1.28
CDC42SE1-202ENST00000439374 INAFM2P0DMQ5 153 aa7.05□□□□□ -1.28
CDC42SE1-202ENST00000439374 TMEM243Q9BU79 118 aa7.05□□□□□ -1.28
CDC42SE1-202ENST00000439374 SMIM9A6NGZ8 99 aa7.05□□□□□ -1.28
CDC42SE1-202ENST00000439374 USP17L23D6RBM5 183 aa7.05□□□□□ -1.28
CDC42SE1-202ENST00000439374 COX7CP15954 63 aa7.05□□□□□ -1.28
CDC42SE1-202ENST00000439374 CR1P17927 2039 aa7.05□□□□□ -1.28
CDC42SE1-202ENST00000439374 LAMTOR3Q9UHA4 124 aa7.05□□□□□ -1.28
CDC42SE1-202ENST00000439374 BAHCC1Q9P281 2608 aa7.04□□□□□ -1.28
CDC42SE1-202ENST00000439374 GHRHP01286 108 aa7.04□□□□□ -1.28
CDC42SE1-202ENST00000439374 C11orf72Q8NBR9 251 aa7.04□□□□□ -1.28
CDC42SE1-202ENST00000439374 IGLV4-60A0A075B6I1 120 aa7.04□□□□□ -1.28
CDC42SE1-202ENST00000439374 HIVEP1P15822 2718 aa7.04□□□□□ -1.28
CDC42SE1-202ENST00000439374 NTM-AS1Q6ZSK4 140 aa7.04□□□□□ -1.28
CDC42SE1-202ENST00000439374 PDZD2O15018 2839 aa7.04□□□□□ -1.28
CDC42SE1-202ENST00000439374 VWFP04275 2813 aa7.04□□□□□ -1.28
CDC42SE1-202ENST00000439374 NBEAL1Q6ZS30 2694 aa7.03□□□□□ -1.28
CDC42SE1-202ENST00000439374 TRBV7-7A0A0K0K1E9 115 aa7.03□□□□□ -1.28
CDC42SE1-202ENST00000439374 CCL18P55774 89 aa7.03□□□□□ -1.28
CDC42SE1-202ENST00000439374 COX7B2Q8TF08 81 aa7.03□□□□□ -1.28
CDC42SE1-202ENST00000439374 DAD1P61803 113 aa7.02□□□□□ -1.29
CDC42SE1-202ENST00000439374 DEFB135Q30KP9 77 aa7.02□□□□□ -1.29
CDC42SE1-202ENST00000439374 DNAJC30Q96LL9 226 aa7.02□□□□□ -1.29
CDC42SE1-202ENST00000439374 PKIGQ9Y2B9 76 aa7.02□□□□□ -1.29
CDC42SE1-202ENST00000439374 PYGO1Q9Y3Y4 419 aa7.02□□□□□ -1.29
CDC42SE1-202ENST00000439374 GYPEP15421 78 aa7.02□□□□□ -1.29
CDC42SE1-202ENST00000439374 A0A0U1RQV1 116 aa7.01□□□□□ -1.29
CDC42SE1-202ENST00000439374 ATOX1O00244 68 aa7.01□□□□□ -1.29
CDC42SE1-202ENST00000439374 FSHBP01225 129 aa7.01□□□□□ -1.29
CDC42SE1-202ENST00000439374 STAB1Q9NY15 2570 aa7.01□□□□□ -1.29
CDC42SE1-202ENST00000439374 J3QKU1 62 aa7.01□□□□□ -1.29
CDC42SE1-202ENST00000439374 Q8N3U1 123 aa7.01□□□□□ -1.29
CDC42SE1-202ENST00000439374 TRAV13-2A0A0B4J235 113 aa7□□□□□ -1.29
CDC42SE1-202ENST00000439374 ACYP1P07311 99 aa7□□□□□ -1.29
CDC42SE1-202ENST00000439374 RPL18AQ02543 176 aaKnown RBP7□□□□□ -1.29
CDC42SE1-202ENST00000439374 IGKV2-28A0A075B6P5 120 aa7□□□□□ -1.29
CDC42SE1-202ENST00000439374 FAM240AA0A1B0GVK7 77 aa7□□□□□ -1.29
CDC42SE1-202ENST00000439374 IGKV2D-28P01615 120 aa7□□□□□ -1.29
CDC42SE1-202ENST00000439374 S100A7L2Q5SY68 101 aa7□□□□□ -1.29
CDC42SE1-202ENST00000439374 C1orf43Q9BWL3 253 aa7□□□□□ -1.29
CDC42SE1-202ENST00000439374 MGAM2Q2M2H8 2515 aa6.99□□□□□ -1.29
CDC42SE1-202ENST00000439374 INAFM1C9JVW0 142 aa6.99□□□□□ -1.29
CDC42SE1-202ENST00000439374 LRRC75A-AS1Q8N1F1 130 aa6.99□□□□□ -1.29
CDC42SE1-202ENST00000439374 KRTAP1-3Q8IUG1 177 aa6.99□□□□□ -1.29
CDC42SE1-202ENST00000439374 LINC00269Q8N2A0 174 aa6.99□□□□□ -1.29
CDC42SE1-202ENST00000439374 F5H768 121 aa6.98□□□□□ -1.29
CDC42SE1-202ENST00000439374 RPL28P46779 137 aaKnown RBP6.98□□□□□ -1.29
CDC42SE1-202ENST00000439374 CDC42SE2Q9NRR3 84 aa6.98□□□□□ -1.29
CDC42SE1-202ENST00000439374 ORMDL1Q9P0S3 153 aa6.98□□□□□ -1.29
CDC42SE1-202ENST00000439374 LINC01561Q8N1V8 128 aa6.97□□□□□ -1.29
CDC42SE1-202ENST00000439374 OTOGQ6ZRI0 2925 aa6.97□□□□□ -1.29
CDC42SE1-202ENST00000439374 TENM1Q9UKZ4 2725 aa6.97□□□□□ -1.29
CDC42SE1-202ENST00000439374 FHL2Q14192 279 aa6.97□□□□□ -1.29
CDC42SE1-202ENST00000439374 C5orf47Q569G3 176 aa6.97□□□□□ -1.29
CDC42SE1-202ENST00000439374 COPS9Q8WXC6 57 aa6.97□□□□□ -1.29
CDC42SE1-202ENST00000439374 MPLKIPQ8TAP9 179 aa6.97□□□□□ -1.29
CDC42SE1-202ENST00000439374 C16orf74Q96GX8 76 aa6.97□□□□□ -1.29
CDC42SE1-202ENST00000439374 LRCOL1A6NCL2 159 aa6.96□□□□□ -1.29
CDC42SE1-202ENST00000439374 OXTP01178 125 aa6.96□□□□□ -1.29
CDC42SE1-202ENST00000439374 ANGP03950 147 aaKnown RBP6.96□□□□□ -1.29
CDC42SE1-202ENST00000439374 C6orf99Q4VX62 202 aa6.96□□□□□ -1.29
CDC42SE1-202ENST00000439374 SPATA3Q8NHX4 192 aa6.96□□□□□ -1.29
CDC42SE1-202ENST00000439374 C22orf24Q9Y442 160 aa6.96□□□□□ -1.29
CDC42SE1-202ENST00000439374 TMEM86BQ8N661 226 aa6.96□□□□□ -1.3
CDC42SE1-202ENST00000439374 SERP2Q8N6R1 65 aa6.96□□□□□ -1.3
CDC42SE1-202ENST00000439374 BEAN1Q3B7T3 259 aa6.96□□□□□ -1.3
CDC42SE1-202ENST00000439374 FAM222AQ5U5X8 452 aa6.96□□□□□ -1.3
CDC42SE1-202ENST00000439374 Q8N9L7 120 aa6.96□□□□□ -1.3
CDC42SE1-202ENST00000439374 UPK3BQ9BT76 320 aa6.96□□□□□ -1.3
CDC42SE1-202ENST00000439374 XAGE1AQ9HD64 81 aa6.96□□□□□ -1.3
CDC42SE1-202ENST00000439374 TRAV25A0A0B4J276 109 aa6.95□□□□□ -1.3
CDC42SE1-202ENST00000439374 IGHV4-28A0A0C4DH34 117 aa6.95□□□□□ -1.3
CDC42SE1-202ENST00000439374 RBM3P98179 157 aaKnown RBP6.95□□□□□ -1.3
CDC42SE1-202ENST00000439374 MRAPQ8TCY5 172 aa6.95□□□□□ -1.3
CDC42SE1-202ENST00000439374 DPH3Q96FX2 82 aa6.95□□□□□ -1.3
CDC42SE1-202ENST00000439374 M0R2N4 97 aa6.94□□□□□ -1.3
CDC42SE1-202ENST00000439374 LY6G6DO95868 133 aa6.94□□□□□ -1.3
CDC42SE1-202ENST00000439374 GIG44P09565 113 aaPredicted RBP6.94□□□□□ -1.3
CDC42SE1-202ENST00000439374 RMI2Q96E14 147 aa6.94□□□□□ -1.3
CDC42SE1-202ENST00000439374 UBL5Q9BZL1 73 aa6.94□□□□□ -1.3
CDC42SE1-202ENST00000439374 COL6A5A8TX70 2615 aa6.94□□□□□ -1.3
CDC42SE1-202ENST00000439374 IGLV5-39A0A0G2JS06 123 aa6.93□□□□□ -1.3
CDC42SE1-202ENST00000439374 TRBV10-1A0A0K0K1A3 114 aa6.93□□□□□ -1.3
CDC42SE1-202ENST00000439374 C2orf48Q96LS8 159 aa6.93□□□□□ -1.3
CDC42SE1-202ENST00000439374 TRBV6-8A0A0A6YYG3 113 aa6.93□□□□□ -1.3
CDC42SE1-202ENST00000439374 IGLV1-51P01701 117 aa6.93□□□□□ -1.3
CDC42SE1-202ENST00000439374 IMUPQ9GZP8 106 aa6.93□□□□□ -1.3
CDC42SE1-202ENST00000439374 TIMM17BO60830 172 aa6.93□□□□□ -1.3
CDC42SE1-202ENST00000439374 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.92□□□□□ -1.3
CDC42SE1-202ENST00000439374 C6orf223Q8N319 242 aa6.92□□□□□ -1.3
CDC42SE1-202ENST00000439374 DEFB105AQ8NG35 78 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms