RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 IBA57-AS1B1ANH7 110 aa17.56■□□□□ 0.4
CPNE1-216ENST00000437340 H7C2G1 150 aa17.56■□□□□ 0.4
CPNE1-216ENST00000437340 SOSTDC1Q6X4U4 206 aa17.56■□□□□ 0.4
CPNE1-216ENST00000437340 K7ERU9 68 aa17.56■□□□□ 0.4
CPNE1-216ENST00000437340 TCL1BO95988 128 aa17.56■□□□□ 0.4
CPNE1-216ENST00000437340 C6orf226Q5I0X4 101 aa17.56■□□□□ 0.4
CPNE1-216ENST00000437340 COX7A2LO14548 114 aa17.55■□□□□ 0.4
CPNE1-216ENST00000437340 DEFB121Q5J5C9 76 aa17.53■□□□□ 0.4
CPNE1-216ENST00000437340 PRR34Q9NV39 138 aa17.53■□□□□ 0.4
CPNE1-216ENST00000437340 WFDC2Q14508 124 aa17.53■□□□□ 0.4
CPNE1-216ENST00000437340 C11orf45Q8TAV5 145 aa17.53■□□□□ 0.4
CPNE1-216ENST00000437340 RPL13AP40429 203 aaKnown RBP17.51■□□□□ 0.39
CPNE1-216ENST00000437340 MIR7-3HGQ8N6C7 128 aa17.51■□□□□ 0.39
CPNE1-216ENST00000437340 SPATA25Q9BR10 227 aa17.51■□□□□ 0.39
CPNE1-216ENST00000437340 TRIAP1O43715 76 aa17.5■□□□□ 0.39
CPNE1-216ENST00000437340 LINC00158P58513 81 aa17.5■□□□□ 0.39
CPNE1-216ENST00000437340 IGLV10-54A0A075B6I4 117 aa17.48■□□□□ 0.39
CPNE1-216ENST00000437340 CXCL5P42830 114 aa17.48■□□□□ 0.39
CPNE1-216ENST00000437340 NANOS2P60321 138 aaKnown RBP17.48■□□□□ 0.39
CPNE1-216ENST00000437340 FOXI1Q12951 378 aa17.48■□□□□ 0.39
CPNE1-216ENST00000437340 MRAPQ8TCY5 172 aa17.48■□□□□ 0.39
CPNE1-216ENST00000437340 TENM3Q9P273 2699 aa17.48■□□□□ 0.39
CPNE1-216ENST00000437340 COX6CP09669 75 aa17.48■□□□□ 0.39
CPNE1-216ENST00000437340 MALP21145 153 aa17.47■□□□□ 0.39
CPNE1-216ENST00000437340 KLK12Q9UKR0 248 aa17.47■□□□□ 0.39
CPNE1-216ENST00000437340 DEFB131BA0A096LNP1 70 aa17.46■□□□□ 0.39
CPNE1-216ENST00000437340 KIAA0087Q14695 138 aa17.46■□□□□ 0.39
CPNE1-216ENST00000437340 TM2D3Q9BRN9 247 aa17.46■□□□□ 0.39
CPNE1-216ENST00000437340 CKS1BP61024 79 aa17.45■□□□□ 0.38
CPNE1-216ENST00000437340 ATXN8Q156A1 80 aa17.45■□□□□ 0.38
CPNE1-216ENST00000437340 MTURNQ8N3F0 131 aa17.45■□□□□ 0.38
CPNE1-216ENST00000437340 CFAP161Q6P656 301 aa17.44■□□□□ 0.38
CPNE1-216ENST00000437340 ENHOQ6UWT2 76 aa17.43■□□□□ 0.38
CPNE1-216ENST00000437340 TRAV8-4A0A0B4J246 113 aa17.43■□□□□ 0.38
CPNE1-216ENST00000437340 SMCPP49901 116 aaPredicted RBP17.43■□□□□ 0.38
CPNE1-216ENST00000437340 KLK5Q9Y337 293 aaPredicted RBP17.43■□□□□ 0.38
CPNE1-216ENST00000437340 GAGE12HA6NDE8 117 aa17.42■□□□□ 0.38
CPNE1-216ENST00000437340 PFN2P35080 140 aa17.42■□□□□ 0.38
CPNE1-216ENST00000437340 HUWE1Q7Z6Z7 4374 aaKnown RBP17.42■□□□□ 0.38
CPNE1-216ENST00000437340 CRPP02741 224 aa17.41■□□□□ 0.38
CPNE1-216ENST00000437340 ETDBQ3ZM63 59 aa17.41■□□□□ 0.38
CPNE1-216ENST00000437340 WFDC10BQ8IUB3 73 aa17.41■□□□□ 0.38
CPNE1-216ENST00000437340 SND1-IT1Q9HBX3 110 aa17.41■□□□□ 0.38
CPNE1-216ENST00000437340 TRAV13-2A0A0B4J235 113 aa17.4■□□□□ 0.38
CPNE1-216ENST00000437340 C2orf82Q6UX34 121 aa17.4■□□□□ 0.38
CPNE1-216ENST00000437340 CCL18P55774 89 aa17.4■□□□□ 0.38
CPNE1-216ENST00000437340 M0QXV9 152 aa17.39■□□□□ 0.37
CPNE1-216ENST00000437340 COX17Q14061 63 aa17.39■□□□□ 0.37
CPNE1-216ENST00000437340 ESRGQ1W209 222 aa17.39■□□□□ 0.37
CPNE1-216ENST00000437340 TRAV10A0A0B4J240 114 aa17.37■□□□□ 0.37
CPNE1-216ENST00000437340 UBE2WQ96B02 151 aa17.37■□□□□ 0.37
CPNE1-216ENST00000437340 RNF151Q2KHN1 245 aa17.36■□□□□ 0.37
CPNE1-216ENST00000437340 LINC01620Q4KN68 170 aa17.35■□□□□ 0.37
CPNE1-216ENST00000437340 DNAH9Q9NYC9 4486 aa17.35■□□□□ 0.37
CPNE1-216ENST00000437340 C9JAW5 83 aa17.34■□□□□ 0.37
CPNE1-216ENST00000437340 J3QR89 54 aa17.34■□□□□ 0.37
CPNE1-216ENST00000437340 SLC25A20O43772 301 aa17.34■□□□□ 0.37
CPNE1-216ENST00000437340 IGKV2-28A0A075B6P5 120 aa17.33■□□□□ 0.37
CPNE1-216ENST00000437340 IGKV2D-28P01615 120 aa17.33■□□□□ 0.37
CPNE1-216ENST00000437340 SPAG11BQ08648 103 aa17.33■□□□□ 0.37
CPNE1-216ENST00000437340 LST1O00453 97 aa17.33■□□□□ 0.36
CPNE1-216ENST00000437340 C15orf53Q8NAA6 179 aa17.33■□□□□ 0.36
CPNE1-216ENST00000437340 LINC01600Q96MT4 127 aa17.33■□□□□ 0.36
CPNE1-216ENST00000437340 LINC01556Q5JQF7 62 aa17.32■□□□□ 0.36
CPNE1-216ENST00000437340 TEN1Q86WV5 123 aa17.31■□□□□ 0.36
CPNE1-216ENST00000437340 LINC00337Q8N6G1 96 aa17.31■□□□□ 0.36
CPNE1-216ENST00000437340 MUC7Q8TAX7 377 aa17.3■□□□□ 0.36
CPNE1-216ENST00000437340 B9D2Q9BPU9 175 aa17.3■□□□□ 0.36
CPNE1-216ENST00000437340 VPS25Q9BRG1 176 aa17.3■□□□□ 0.36
CPNE1-216ENST00000437340 CBY1Q9Y3M2 126 aa17.3■□□□□ 0.36
CPNE1-216ENST00000437340 TRBV10-2A0A0K0K1G8 114 aa17.29■□□□□ 0.36
CPNE1-216ENST00000437340 CLEC2BQ92478 149 aa17.29■□□□□ 0.36
CPNE1-216ENST00000437340 RPL28P46779 137 aaKnown RBP17.28■□□□□ 0.36
CPNE1-216ENST00000437340 ANKRD29Q8N6D5 301 aa17.27■□□□□ 0.35
CPNE1-216ENST00000437340 KRTAP26-1Q6PEX3 210 aa17.26■□□□□ 0.35
CPNE1-216ENST00000437340 COL7A1Q02388 2944 aa17.25■□□□□ 0.35
CPNE1-216ENST00000437340 PRKDCP78527 4128 aaKnown RBP17.24■□□□□ 0.35
CPNE1-216ENST00000437340 GVQW2A0A096LPI5 108 aaPredicted RBP17.24■□□□□ 0.35
CPNE1-216ENST00000437340 NDUFC2O95298 119 aa17.24■□□□□ 0.35
CPNE1-216ENST00000437340 PPDPFLQ8WWR9 84 aa17.24■□□□□ 0.35
CPNE1-216ENST00000437340 DNAH10OSP0CZ25 163 aa17.23■□□□□ 0.35
CPNE1-216ENST00000437340 UNQ6190/PRO20217Q6UXQ8 127 aa17.23■□□□□ 0.35
CPNE1-216ENST00000437340 C6orf223Q8N319 242 aa17.23■□□□□ 0.35
CPNE1-216ENST00000437340 MEGF8Q7Z7M0 2845 aa17.23■□□□□ 0.35
CPNE1-216ENST00000437340 H3BT86 120 aa17.23■□□□□ 0.35
CPNE1-216ENST00000437340 NTN5Q8WTR8 489 aaPredicted RBP17.22■□□□□ 0.35
CPNE1-216ENST00000437340 C9orf116Q5BN46 136 aaPredicted RBP17.21■□□□□ 0.35
CPNE1-216ENST00000437340 C10orf25Q5T742 122 aa17.21■□□□□ 0.35
CPNE1-216ENST00000437340 C1orf43Q9BWL3 253 aa17.19■□□□□ 0.34
CPNE1-216ENST00000437340 SMIM11BQ8TCY0 68 aa17.18■□□□□ 0.34
CPNE1-216ENST00000437340 TRACP01848 142 aa17.17■□□□□ 0.34
CPNE1-216ENST00000437340 CARD19Q96LW7 228 aa17.17■□□□□ 0.34
CPNE1-216ENST00000437340 LINC00526Q96FQ7 95 aa17.17■□□□□ 0.34
CPNE1-216ENST00000437340 ZNF561-AS1K7EIQ3 104 aa17.15■□□□□ 0.34
CPNE1-216ENST00000437340 OR13C6PQ8NH95 151 aa17.15■□□□□ 0.34
CPNE1-216ENST00000437340 LINC00588Q9Y4M8 146 aa17.15■□□□□ 0.34
CPNE1-216ENST00000437340 H0YGX0 51 aa17.14■□□□□ 0.33
CPNE1-216ENST00000437340 C2orf48Q96LS8 159 aa17.12■□□□□ 0.33
CPNE1-216ENST00000437340 C6orf48Q9UBA6 75 aa17.12■□□□□ 0.33
CPNE1-216ENST00000437340 C15orf56Q8N910 161 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms