RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 LELP1Q5T871 98 aa8.85□□□□□ -0.99
DDX56-204ENST00000431640 RETNQ9HD89 108 aa8.85□□□□□ -0.99
DDX56-204ENST00000431640 TENM3Q9P273 2699 aa8.84□□□□□ -0.99
DDX56-204ENST00000431640 PRKDCP78527 4128 aaKnown RBP8.84□□□□□ -0.99
DDX56-204ENST00000431640 MTURNQ8N3F0 131 aa8.84□□□□□ -0.99
DDX56-204ENST00000431640 XCL1P47992 114 aa8.83□□□□□ -1
DDX56-204ENST00000431640 CD164L2Q6UWJ8 174 aa8.83□□□□□ -1
DDX56-204ENST00000431640 TEN1Q86WV5 123 aa8.83□□□□□ -1
DDX56-204ENST00000431640 Q8IZM0 81 aa8.83□□□□□ -1
DDX56-204ENST00000431640 LINC01600Q96MT4 127 aa8.83□□□□□ -1
DDX56-204ENST00000431640 H3BNG1 76 aa8.82□□□□□ -1
DDX56-204ENST00000431640 SLC25A20O43772 301 aa8.82□□□□□ -1
DDX56-204ENST00000431640 HTN3P15516 51 aa8.82□□□□□ -1
DDX56-204ENST00000431640 LINC00158P58513 81 aa8.82□□□□□ -1
DDX56-204ENST00000431640 FOXI1Q12951 378 aa8.82□□□□□ -1
DDX56-204ENST00000431640 LINC01620Q4KN68 170 aa8.82□□□□□ -1
DDX56-204ENST00000431640 SOSTDC1Q6X4U4 206 aa8.82□□□□□ -1
DDX56-204ENST00000431640 LINC00269Q8N2A0 174 aa8.82□□□□□ -1
DDX56-204ENST00000431640 TRAV13-2A0A0B4J235 113 aa8.82□□□□□ -1
DDX56-204ENST00000431640 C9JAW5 83 aa8.82□□□□□ -1
DDX56-204ENST00000431640 ANGP03950 147 aaKnown RBP8.82□□□□□ -1
DDX56-204ENST00000431640 REG3AQ06141 175 aa8.82□□□□□ -1
DDX56-204ENST00000431640 MIR7-3HGQ8N6C7 128 aa8.82□□□□□ -1
DDX56-204ENST00000431640 PPDPFLQ8WWR9 84 aa8.82□□□□□ -1
DDX56-204ENST00000431640 COL7A1Q02388 2944 aa8.81□□□□□ -1
DDX56-204ENST00000431640 COX7A2LO14548 114 aa8.81□□□□□ -1
DDX56-204ENST00000431640 TRBV10-2A0A0K0K1G8 114 aa8.8□□□□□ -1
DDX56-204ENST00000431640 CXCL5P42830 114 aa8.8□□□□□ -1
DDX56-204ENST00000431640 ANKRD29Q8N6D5 301 aa8.8□□□□□ -1
DDX56-204ENST00000431640 CHCHD10Q8WYQ3 142 aaPredicted RBP8.79□□□□□ -1
DDX56-204ENST00000431640 C11orf68Q9H3H3 251 aaKnown RBP8.79□□□□□ -1
DDX56-204ENST00000431640 HUWE1Q7Z6Z7 4374 aaKnown RBP8.79□□□□□ -1
DDX56-204ENST00000431640 LST1O00453 97 aa8.78□□□□□ -1
DDX56-204ENST00000431640 MALP21145 153 aa8.78□□□□□ -1
DDX56-204ENST00000431640 CKS1BP61024 79 aa8.78□□□□□ -1
DDX56-204ENST00000431640 DEFB121Q5J5C9 76 aa8.78□□□□□ -1
DDX56-204ENST00000431640 MRAPQ8TCY5 172 aa8.78□□□□□ -1
DDX56-204ENST00000431640 SND1-IT1Q9HBX3 110 aa8.78□□□□□ -1
DDX56-204ENST00000431640 CFAP161Q6P656 301 aa8.78□□□□□ -1
DDX56-204ENST00000431640 CLPSL2Q6UWE3 100 aa8.78□□□□□ -1
DDX56-204ENST00000431640 LYPD5Q6UWN5 251 aa8.78□□□□□ -1
DDX56-204ENST00000431640 DNAH9Q9NYC9 4486 aa8.77□□□□□ -1
DDX56-204ENST00000431640 FBN3Q75N90 2809 aa8.77□□□□□ -1.01
DDX56-204ENST00000431640 H3BT86 120 aa8.77□□□□□ -1.01
DDX56-204ENST00000431640 CRPP02741 224 aa8.77□□□□□ -1.01
DDX56-204ENST00000431640 COX17Q14061 63 aa8.77□□□□□ -1.01
DDX56-204ENST00000431640 TM2D3Q9BRN9 247 aa8.77□□□□□ -1.01
DDX56-204ENST00000431640 GAGE12HA6NDE8 117 aa8.76□□□□□ -1.01
DDX56-204ENST00000431640 PFN2P35080 140 aa8.76□□□□□ -1.01
DDX56-204ENST00000431640 CCL18P55774 89 aa8.76□□□□□ -1.01
DDX56-204ENST00000431640 RPL28P46779 137 aaKnown RBP8.75□□□□□ -1.01
DDX56-204ENST00000431640 PCP4P48539 62 aa8.75□□□□□ -1.01
DDX56-204ENST00000431640 CARD19Q96LW7 228 aa8.75□□□□□ -1.01
DDX56-204ENST00000431640 SPATA25Q9BR10 227 aa8.75□□□□□ -1.01
DDX56-204ENST00000431640 PRR34Q9NV39 138 aa8.75□□□□□ -1.01
DDX56-204ENST00000431640 KLK5Q9Y337 293 aaPredicted RBP8.75□□□□□ -1.01
DDX56-204ENST00000431640 TRAV8-4A0A0B4J246 113 aa8.74□□□□□ -1.01
DDX56-204ENST00000431640 KIAA0087Q14695 138 aa8.74□□□□□ -1.01
DDX56-204ENST00000431640 C2orf82Q6UX34 121 aa8.74□□□□□ -1.01
DDX56-204ENST00000431640 CLEC2BQ92478 149 aa8.74□□□□□ -1.01
DDX56-204ENST00000431640 SIGMAR1Q99720 223 aa8.74□□□□□ -1.01
DDX56-204ENST00000431640 MUC7Q8TAX7 377 aa8.73□□□□□ -1.01
DDX56-204ENST00000431640 IGLV10-54A0A075B6I4 117 aa8.73□□□□□ -1.01
DDX56-204ENST00000431640 TRACP01848 142 aa8.73□□□□□ -1.01
DDX56-204ENST00000431640 B9D2Q9BPU9 175 aa8.73□□□□□ -1.01
DDX56-204ENST00000431640 KLK12Q9UKR0 248 aa8.73□□□□□ -1.01
DDX56-204ENST00000431640 IGKV2-28A0A075B6P5 120 aa8.72□□□□□ -1.01
DDX56-204ENST00000431640 IGKV2D-28P01615 120 aa8.72□□□□□ -1.01
DDX56-204ENST00000431640 H0YGX0 51 aa8.71□□□□□ -1.02
DDX56-204ENST00000431640 Q8N3U1 123 aa8.71□□□□□ -1.02
DDX56-204ENST00000431640 LINC00337Q8N6G1 96 aa8.71□□□□□ -1.02
DDX56-204ENST00000431640 NTN5Q8WTR8 489 aaPredicted RBP8.71□□□□□ -1.02
DDX56-204ENST00000431640 ENHOQ6UWT2 76 aa8.7□□□□□ -1.02
DDX56-204ENST00000431640 Q6ZTC4 211 aa8.7□□□□□ -1.02
DDX56-204ENST00000431640 C11orf45Q8TAV5 145 aa8.7□□□□□ -1.02
DDX56-204ENST00000431640 NDUFC2O95298 119 aa8.69□□□□□ -1.02
DDX56-204ENST00000431640 UBE2WQ96B02 151 aa8.69□□□□□ -1.02
DDX56-204ENST00000431640 A0A0J9YWU9 116 aa8.69□□□□□ -1.02
DDX56-204ENST00000431640 SMIM11BQ8TCY0 68 aa8.68□□□□□ -1.02
DDX56-204ENST00000431640 DEFB131BA0A096LNP1 70 aa8.67□□□□□ -1.02
DDX56-204ENST00000431640 SCGB1A1P11684 91 aa8.67□□□□□ -1.02
DDX56-204ENST00000431640 SPAG11BQ08648 103 aa8.67□□□□□ -1.02
DDX56-204ENST00000431640 OR13C6PQ8NH95 151 aa8.67□□□□□ -1.02
DDX56-204ENST00000431640 STAB2Q8WWQ8 2551 aa8.66□□□□□ -1.02
DDX56-204ENST00000431640 GVQW2A0A096LPI5 108 aaPredicted RBP8.65□□□□□ -1.02
DDX56-204ENST00000431640 TEX49A0A1B0GTD5 131 aa8.65□□□□□ -1.02
DDX56-204ENST00000431640 NANOS2P60321 138 aaKnown RBP8.65□□□□□ -1.02
DDX56-204ENST00000431640 BAALC-AS2P0C853 105 aa8.65□□□□□ -1.03
DDX56-204ENST00000431640 ESRGQ1W209 222 aa8.65□□□□□ -1.03
DDX56-204ENST00000431640 WFDC10BQ8IUB3 73 aa8.65□□□□□ -1.03
DDX56-204ENST00000431640 TMEM126AQ9H061 195 aa8.65□□□□□ -1.03
DDX56-204ENST00000431640 CDIP1Q9H305 208 aa8.65□□□□□ -1.03
DDX56-204ENST00000431640 UNQ6190/PRO20217Q6UXQ8 127 aa8.63□□□□□ -1.03
DDX56-204ENST00000431640 TRAV10A0A0B4J240 114 aa8.62□□□□□ -1.03
DDX56-204ENST00000431640 DNAL4O96015 105 aa8.62□□□□□ -1.03
DDX56-204ENST00000431640 LINC01556Q5JQF7 62 aa8.62□□□□□ -1.03
DDX56-204ENST00000431640 C15orf53Q8NAA6 179 aa8.62□□□□□ -1.03
DDX56-204ENST00000431640 FAM218AQ96MZ4 157 aa8.62□□□□□ -1.03
DDX56-204ENST00000431640 A0A1B0GX51 115 aa8.61□□□□□ -1.03
DDX56-204ENST00000431640 F8WDY8 70 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms