RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 ATG2AQ2TAZ0 1938 aa9.11□□□□□ -0.95
LDB3-205ENST00000429277 PRR4Q16378 134 aa9.11□□□□□ -0.95
LDB3-205ENST00000429277 Q9BRP9 147 aa9.11□□□□□ -0.95
LDB3-205ENST00000429277 A0A0U1RQV1 116 aa9.1□□□□□ -0.95
LDB3-205ENST00000429277 C9orf116Q5BN46 136 aaPredicted RBP9.1□□□□□ -0.95
LDB3-205ENST00000429277 KRTAP10-9P60411 292 aa9.1□□□□□ -0.95
LDB3-205ENST00000429277 RETNQ9HD89 108 aa9.1□□□□□ -0.95
LDB3-205ENST00000429277 CCDC179H3BU77 68 aa9.1□□□□□ -0.95
LDB3-205ENST00000429277 EDN2P20800 178 aa9.1□□□□□ -0.95
LDB3-205ENST00000429277 C1orf134Q5TEV5 83 aa9.1□□□□□ -0.95
LDB3-205ENST00000429277 LIMD2Q9BT23 127 aa9.1□□□□□ -0.95
LDB3-205ENST00000429277 CELA1Q9UNI1 258 aa9.1□□□□□ -0.95
LDB3-205ENST00000429277 LYPD5Q6UWN5 251 aa9.09□□□□□ -0.95
LDB3-205ENST00000429277 A0A087WYN8 130 aa9.09□□□□□ -0.95
LDB3-205ENST00000429277 TSPEAR-AS2P59090 65 aa9.09□□□□□ -0.95
LDB3-205ENST00000429277 PRRC2AP48634 2157 aaKnown RBP9.08□□□□□ -0.96
LDB3-205ENST00000429277 TANC2Q9HCD6 1990 aa9.08□□□□□ -0.96
LDB3-205ENST00000429277 IGHV6-1A0A0B4J1U7 121 aa9.07□□□□□ -0.96
LDB3-205ENST00000429277 TRBV7-6A0A0J9YX20 115 aa9.07□□□□□ -0.96
LDB3-205ENST00000429277 LINC01556Q5JQF7 62 aa9.07□□□□□ -0.96
LDB3-205ENST00000429277 SMR3AQ99954 134 aa9.07□□□□□ -0.96
LDB3-205ENST00000429277 COL5A1P20908 1838 aaPredicted RBP9.07□□□□□ -0.96
LDB3-205ENST00000429277 LINC01547P58512 204 aaPredicted RBP9.07□□□□□ -0.96
LDB3-205ENST00000429277 ABCA2Q9BZC7 2435 aa9.07□□□□□ -0.96
LDB3-205ENST00000429277 LINC00575Q6W349 94 aa9.06□□□□□ -0.96
LDB3-205ENST00000429277 ADAMTSL4-AS1Q5T5F5 129 aa9.06□□□□□ -0.96
LDB3-205ENST00000429277 Q8N3U1 123 aa9.06□□□□□ -0.96
LDB3-205ENST00000429277 DOPEY1Q5JWR5 2465 aa9.06□□□□□ -0.96
LDB3-205ENST00000429277 MYO9AB2RTY4 2548 aa9.06□□□□□ -0.96
LDB3-205ENST00000429277 NCOR2Q9Y618 2525 aa9.05□□□□□ -0.96
LDB3-205ENST00000429277 A0A087WSZ3 146 aa9.04□□□□□ -0.96
LDB3-205ENST00000429277 TRBV7-7A0A0K0K1E9 115 aa9.04□□□□□ -0.96
LDB3-205ENST00000429277 A0A1W2PPR1 153 aa9.03□□□□□ -0.96
LDB3-205ENST00000429277 hDV103S1A0JD37 113 aa9.03□□□□□ -0.96
LDB3-205ENST00000429277 ARHGAP32A7KAX9 2087 aa9.03□□□□□ -0.96
LDB3-205ENST00000429277 A0A096LNJ9 63 aa9.03□□□□□ -0.96
LDB3-205ENST00000429277 PRR3P79522 188 aaKnown RBP9.03□□□□□ -0.96
LDB3-205ENST00000429277 C1orf195Q5TG92 126 aa9.02□□□□□ -0.97
LDB3-205ENST00000429277 A0A1B0GW54 56 aa9.02□□□□□ -0.97
LDB3-205ENST00000429277 CXCL6P80162 114 aa9.02□□□□□ -0.97
LDB3-205ENST00000429277 HCG22E2RYF7 251 aa9.01□□□□□ -0.97
LDB3-205ENST00000429277 H0Y9P7 68 aa9.01□□□□□ -0.97
LDB3-205ENST00000429277 Q6ZSN1 163 aa9.01□□□□□ -0.97
LDB3-205ENST00000429277 Q6ZRU5 148 aa9.01□□□□□ -0.97
LDB3-205ENST00000429277 EML5Q05BV3 1969 aa9□□□□□ -0.97
LDB3-205ENST00000429277 IGF2RP11717 2491 aa9□□□□□ -0.97
LDB3-205ENST00000429277 A0A087WVE0 104 aa9□□□□□ -0.97
LDB3-205ENST00000429277 IGLV5-39A0A0G2JS06 123 aa9□□□□□ -0.97
LDB3-205ENST00000429277 KIF25-AS1Q9Y6Z4 181 aa9□□□□□ -0.97
LDB3-205ENST00000429277 FHL3Q13643 280 aa8.99□□□□□ -0.97
LDB3-205ENST00000429277 LINC01546A6NGU7 62 aa8.99□□□□□ -0.97
LDB3-205ENST00000429277 H3BNG1 76 aa8.99□□□□□ -0.97
LDB3-205ENST00000429277 C11orf72Q8NBR9 251 aa8.98□□□□□ -0.97
LDB3-205ENST00000429277 TMEM254Q8TBM7 123 aa8.98□□□□□ -0.97
LDB3-205ENST00000429277 C22orf24Q9Y442 160 aa8.97□□□□□ -0.97
LDB3-205ENST00000429277 SMCR5Q8TEV8 140 aa8.96□□□□□ -0.97
LDB3-205ENST00000429277 BCE1O60756 84 aa8.96□□□□□ -0.98
LDB3-205ENST00000429277 RAI1Q7Z5J4 1906 aaPredicted RBP8.96□□□□□ -0.98
LDB3-205ENST00000429277 LINC00337Q8N6G1 96 aa8.95□□□□□ -0.98
LDB3-205ENST00000429277 TP53AIP1Q9HCN2 124 aa8.95□□□□□ -0.98
LDB3-205ENST00000429277 IGHV3OR16-9A0A0B4J2B5 98 aa8.95□□□□□ -0.98
LDB3-205ENST00000429277 PCOTHQ58A44 107 aa8.95□□□□□ -0.98
LDB3-205ENST00000429277 PMAIP1Q13794 54 aa8.94□□□□□ -0.98
LDB3-205ENST00000429277 LINC00846Q9NV44 126 aa8.94□□□□□ -0.98
LDB3-205ENST00000429277 PTPRSQ13332 1948 aa8.92□□□□□ -0.98
LDB3-205ENST00000429277 SOSTDC1Q6X4U4 206 aa8.92□□□□□ -0.98
LDB3-205ENST00000429277 FAM19A4Q96LR4 140 aa8.92□□□□□ -0.98
LDB3-205ENST00000429277 PRLHP81277 87 aa8.92□□□□□ -0.98
LDB3-205ENST00000429277 TLN1Q9Y490 2541 aaKnown RBP8.92□□□□□ -0.98
LDB3-205ENST00000429277 PIEZO2Q9H5I5 2752 aa8.92□□□□□ -0.98
LDB3-205ENST00000429277 X6R8D5 127 aa8.92□□□□□ -0.98
LDB3-205ENST00000429277 CPAMD8Q8IZJ3 1885 aa8.91□□□□□ -0.98
LDB3-205ENST00000429277 IGLV5-45A0A087WSX0 123 aa8.91□□□□□ -0.98
LDB3-205ENST00000429277 ADAMTS20P59510 1910 aa8.9□□□□□ -0.98
LDB3-205ENST00000429277 C1orf64Q8NEQ6 169 aa8.9□□□□□ -0.99
LDB3-205ENST00000429277 SBSPONQ8IVN8 264 aa8.89□□□□□ -0.99
LDB3-205ENST00000429277 H3BPC8 53 aa8.88□□□□□ -0.99
LDB3-205ENST00000429277 LINC00315P59091 139 aa8.88□□□□□ -0.99
LDB3-205ENST00000429277 MDFIQ99750 246 aa8.88□□□□□ -0.99
LDB3-205ENST00000429277 EXPH5Q8NEV8 1989 aa8.88□□□□□ -0.99
LDB3-205ENST00000429277 KIAA0087Q14695 138 aa8.88□□□□□ -0.99
LDB3-205ENST00000429277 SPINK1P00995 79 aa8.87□□□□□ -0.99
LDB3-205ENST00000429277 AGRNO00468 2067 aa8.87□□□□□ -0.99
LDB3-205ENST00000429277 LINC00167Q96N53 147 aa8.87□□□□□ -0.99
LDB3-205ENST00000429277 SPATA3Q8NHX4 192 aa8.86□□□□□ -0.99
LDB3-205ENST00000429277 RETNLBQ9BQ08 111 aa8.86□□□□□ -0.99
LDB3-205ENST00000429277 A8MTW9 85 aa8.86□□□□□ -0.99
LDB3-205ENST00000429277 DEFB116Q30KQ4 102 aa8.85□□□□□ -0.99
LDB3-205ENST00000429277 JMJD1CQ15652 2540 aa8.84□□□□□ -0.99
LDB3-205ENST00000429277 ELOF1P60002 83 aaKnown RBP8.84□□□□□ -0.99
LDB3-205ENST00000429277 C6orf48Q9UBA6 75 aa8.84□□□□□ -0.99
LDB3-205ENST00000429277 ACYP2P14621 99 aa8.83□□□□□ -1
LDB3-205ENST00000429277 ABCA12Q86UK0 2595 aa8.83□□□□□ -1
LDB3-205ENST00000429277 PSPHP1O15172 72 aa8.83□□□□□ -1
LDB3-205ENST00000429277 IGKV2D-30A0A075B6S6 120 aa8.82□□□□□ -1
LDB3-205ENST00000429277 IGKV2-30P06310 120 aa8.82□□□□□ -1
LDB3-205ENST00000429277 CRYGAP11844 174 aa8.82□□□□□ -1
LDB3-205ENST00000429277 Q8NBF4 154 aa8.82□□□□□ -1
LDB3-205ENST00000429277 SMIM29Q86T20 159 aa8.81□□□□□ -1
LDB3-205ENST00000429277 C7orf65Q6ZTY9 151 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms