RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 CCL24O00175 119 aa10.38□□□□□ -0.75
SYNGAP1-203ENST00000428982 PRB2P02812 416 aaPredicted RBP10.38□□□□□ -0.75
SYNGAP1-203ENST00000428982 NREPQ16612 68 aa10.38□□□□□ -0.75
SYNGAP1-203ENST00000428982 TMEM254Q8TBM7 123 aa10.38□□□□□ -0.75
SYNGAP1-203ENST00000428982 SLURP1P55000 103 aa10.37□□□□□ -0.75
SYNGAP1-203ENST00000428982 SCXQ7RTU7 201 aa10.37□□□□□ -0.75
SYNGAP1-203ENST00000428982 Q8N3U1 123 aa10.37□□□□□ -0.75
SYNGAP1-203ENST00000428982 LYRM9A8MSI8 78 aa10.36□□□□□ -0.75
SYNGAP1-203ENST00000428982 LYPD5Q6UWN5 251 aa10.36□□□□□ -0.75
SYNGAP1-203ENST00000428982 ZNF575Q86XF7 245 aa10.36□□□□□ -0.75
SYNGAP1-203ENST00000428982 PRR15Q8IV56 129 aa10.36□□□□□ -0.75
SYNGAP1-203ENST00000428982 COX7B2Q8TF08 81 aa10.36□□□□□ -0.75
SYNGAP1-203ENST00000428982 ZNF702PQ9H963 129 aa10.36□□□□□ -0.75
SYNGAP1-203ENST00000428982 SMG1Q96Q15 3661 aaKnown RBP10.36□□□□□ -0.75
SYNGAP1-203ENST00000428982 NBEAQ8NFP9 2946 aa10.36□□□□□ -0.75
SYNGAP1-203ENST00000428982 C4orf3Q8WVX3 66 aa10.35□□□□□ -0.75
SYNGAP1-203ENST00000428982 PRYO14603 147 aa10.35□□□□□ -0.75
SYNGAP1-203ENST00000428982 LINC00315P59091 139 aa10.34□□□□□ -0.75
SYNGAP1-203ENST00000428982 UBE2BP63146 152 aa10.34□□□□□ -0.75
SYNGAP1-203ENST00000428982 C16orf95Q9H693 158 aa10.34□□□□□ -0.75
SYNGAP1-203ENST00000428982 ACANP16112 2415 aa10.34□□□□□ -0.75
SYNGAP1-203ENST00000428982 WNK1Q9H4A3 2382 aa10.33□□□□□ -0.76
SYNGAP1-203ENST00000428982 TRGV1A0A0A0MS02 117 aa10.33□□□□□ -0.76
SYNGAP1-203ENST00000428982 CENPEQ02224 2701 aa10.32□□□□□ -0.76
SYNGAP1-203ENST00000428982 TRAV10A0A0B4J240 114 aa10.32□□□□□ -0.76
SYNGAP1-203ENST00000428982 C10orf99Q6UWK7 81 aa10.32□□□□□ -0.76
SYNGAP1-203ENST00000428982 SMR3AQ99954 134 aa10.32□□□□□ -0.76
SYNGAP1-203ENST00000428982 HECTD1Q9ULT8 2610 aa10.32□□□□□ -0.76
SYNGAP1-203ENST00000428982 MTORP42345 2549 aa10.32□□□□□ -0.76
SYNGAP1-203ENST00000428982 RELNP78509 3460 aa10.32□□□□□ -0.76
SYNGAP1-203ENST00000428982 TRBV10-1A0A0K0K1A3 114 aa10.32□□□□□ -0.76
SYNGAP1-203ENST00000428982 BPY2O14599 106 aa10.31□□□□□ -0.76
SYNGAP1-203ENST00000428982 BEAN1Q3B7T3 259 aa10.3□□□□□ -0.76
SYNGAP1-203ENST00000428982 LINC01547P58512 204 aaPredicted RBP10.3□□□□□ -0.76
SYNGAP1-203ENST00000428982 LINC00467Q9BRT7 94 aa10.3□□□□□ -0.76
SYNGAP1-203ENST00000428982 TRGV2A0A075B6R0 118 aa10.3□□□□□ -0.76
SYNGAP1-203ENST00000428982 FAM19A3Q7Z5A8 133 aa10.29□□□□□ -0.76
SYNGAP1-203ENST00000428982 C9orf129Q5T035 196 aaKnown RBP10.29□□□□□ -0.76
SYNGAP1-203ENST00000428982 LINC00337Q8N6G1 96 aa10.29□□□□□ -0.76
SYNGAP1-203ENST00000428982 IGHV3-53P01767 116 aa10.28□□□□□ -0.76
SYNGAP1-203ENST00000428982 JMJD1CQ15652 2540 aa10.28□□□□□ -0.76
SYNGAP1-203ENST00000428982 PDE6GP18545 87 aa10.28□□□□□ -0.76
SYNGAP1-203ENST00000428982 CHKB-CPT1BH3BT56 60 aa10.28□□□□□ -0.76
SYNGAP1-203ENST00000428982 LINC01006Q8NI28 216 aa10.28□□□□□ -0.76
SYNGAP1-203ENST00000428982 TM2D3Q9BRN9 247 aa10.28□□□□□ -0.76
SYNGAP1-203ENST00000428982 HELZ2Q9BYK8 2649 aaKnown RBP10.27□□□□□ -0.77
SYNGAP1-203ENST00000428982 CFAP46Q8IYW2 2715 aa10.27□□□□□ -0.77
SYNGAP1-203ENST00000428982 A0A096LNT2 108 aa10.26□□□□□ -0.77
SYNGAP1-203ENST00000428982 SETD2Q9BYW2 2564 aaPredicted RBP10.26□□□□□ -0.77
SYNGAP1-203ENST00000428982 TRGV4A0A0C4DH28 118 aa10.26□□□□□ -0.77
SYNGAP1-203ENST00000428982 FLNBO75369 2602 aaKnown RBP10.26□□□□□ -0.77
SYNGAP1-203ENST00000428982 Q6ZTI0 123 aa10.26□□□□□ -0.77
SYNGAP1-203ENST00000428982 KALRNO60229 2985 aa10.26□□□□□ -0.77
SYNGAP1-203ENST00000428982 UBE2AP49459 152 aa10.25□□□□□ -0.77
SYNGAP1-203ENST00000428982 Q6ZVQ6 151 aa10.25□□□□□ -0.77
SYNGAP1-203ENST00000428982 EPM2AB3EWF7 344 aa10.24□□□□□ -0.77
SYNGAP1-203ENST00000428982 K7EQD1 137 aa10.24□□□□□ -0.77
SYNGAP1-203ENST00000428982 NDUFS5O43920 106 aa10.24□□□□□ -0.77
SYNGAP1-203ENST00000428982 FSHBP01225 129 aa10.24□□□□□ -0.77
SYNGAP1-203ENST00000428982 Q6ZRU5 148 aa10.24□□□□□ -0.77
SYNGAP1-203ENST00000428982 C2CD3Q4AC94 2353 aa10.23□□□□□ -0.77
SYNGAP1-203ENST00000428982 SMIM1B2RUZ4 78 aa10.23□□□□□ -0.77
SYNGAP1-203ENST00000428982 COX6A2Q02221 97 aa10.23□□□□□ -0.77
SYNGAP1-203ENST00000428982 ITPR1Q14643 2758 aa10.23□□□□□ -0.77
SYNGAP1-203ENST00000428982 CCL18P55774 89 aa10.22□□□□□ -0.77
SYNGAP1-203ENST00000428982 C9orf66Q5T8R8 295 aa10.22□□□□□ -0.77
SYNGAP1-203ENST00000428982 MAP6D1Q9H9H5 199 aa10.22□□□□□ -0.77
SYNGAP1-203ENST00000428982 CHD6Q8TD26 2715 aa10.22□□□□□ -0.77
SYNGAP1-203ENST00000428982 PROK1P58294 105 aa10.21□□□□□ -0.77
SYNGAP1-203ENST00000428982 LINC00242Q5T6M2 205 aa10.21□□□□□ -0.77
SYNGAP1-203ENST00000428982 NTM-AS1Q6ZSK4 140 aa10.21□□□□□ -0.77
SYNGAP1-203ENST00000428982 KTN1-AS1Q86SY8 53 aa10.21□□□□□ -0.77
SYNGAP1-203ENST00000428982 APOC4P55056 127 aa10.21□□□□□ -0.78
SYNGAP1-203ENST00000428982 PRR4Q16378 134 aa10.21□□□□□ -0.78
SYNGAP1-203ENST00000428982 FAM229BQ4G0N7 80 aa10.21□□□□□ -0.78
SYNGAP1-203ENST00000428982 Q8N814 137 aa10.21□□□□□ -0.78
SYNGAP1-203ENST00000428982 RBM12B-AS1Q9P1G2 102 aa10.21□□□□□ -0.78
SYNGAP1-203ENST00000428982 CXCL6P80162 114 aa10.2□□□□□ -0.78
SYNGAP1-203ENST00000428982 C11orf72Q8NBR9 251 aa10.2□□□□□ -0.78
SYNGAP1-203ENST00000428982 FLNCQ14315 2725 aa10.19□□□□□ -0.78
SYNGAP1-203ENST00000428982 A6NED7 52 aa10.19□□□□□ -0.78
SYNGAP1-203ENST00000428982 FN1P02751 2386 aaKnown RBP10.18□□□□□ -0.78
SYNGAP1-203ENST00000428982 C18orf65Q6ZTR6 163 aa10.18□□□□□ -0.78
SYNGAP1-203ENST00000428982 CHCHD7Q9BUK0 85 aa10.18□□□□□ -0.78
SYNGAP1-203ENST00000428982 C1orf158Q8N1D5 194 aa10.18□□□□□ -0.78
SYNGAP1-203ENST00000428982 C22orf24Q9Y442 160 aa10.18□□□□□ -0.78
SYNGAP1-203ENST00000428982 IGLV5-39A0A0G2JS06 123 aa10.18□□□□□ -0.78
SYNGAP1-203ENST00000428982 ESM1Q9NQ30 184 aa10.17□□□□□ -0.78
SYNGAP1-203ENST00000428982 C16orf74Q96GX8 76 aa10.17□□□□□ -0.78
SYNGAP1-203ENST00000428982 OBSCN-AS1Q96MR7 158 aa10.17□□□□□ -0.78
SYNGAP1-203ENST00000428982 IBA57-AS1B1ANH7 110 aa10.17□□□□□ -0.78
SYNGAP1-203ENST00000428982 NANOS2P60321 138 aaKnown RBP10.17□□□□□ -0.78
SYNGAP1-203ENST00000428982 DEFB114Q30KQ6 69 aa10.17□□□□□ -0.78
SYNGAP1-203ENST00000428982 KRTAP1-3Q8IUG1 177 aa10.16□□□□□ -0.78
SYNGAP1-203ENST00000428982 HIGD2AQ9BW72 106 aa10.16□□□□□ -0.78
SYNGAP1-203ENST00000428982 Q9UF83 564 aa10.15□□□□□ -0.78
SYNGAP1-203ENST00000428982 FLNAP21333 2647 aaKnown RBP10.15□□□□□ -0.78
SYNGAP1-203ENST00000428982 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.14□□□□□ -0.79
SYNGAP1-203ENST00000428982 ADGRG4Q8IZF6 3080 aa10.14□□□□□ -0.79
SYNGAP1-203ENST00000428982 MUC4Q99102 2169 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 183.3 ms