RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 TRGV4A0A0C4DH28 118 aa5.93□□□□□ -1.46
HDAC1-202ENST00000428704 GAGE12JA6NER3 117 aa5.93□□□□□ -1.46
HDAC1-202ENST00000428704 KRTAP9-7A8MTY7 169 aa5.93□□□□□ -1.46
HDAC1-202ENST00000428704 ATP5G1P05496 136 aa5.93□□□□□ -1.46
HDAC1-202ENST00000428704 TSPEAR-AS2P59090 65 aa5.93□□□□□ -1.46
HDAC1-202ENST00000428704 GAGE4Q13068 117 aa5.93□□□□□ -1.46
HDAC1-202ENST00000428704 GAGE5Q13069 117 aa5.93□□□□□ -1.46
HDAC1-202ENST00000428704 GAGE13Q4V321 117 aa5.93□□□□□ -1.46
HDAC1-202ENST00000428704 AMMECR1LQ6DCA0 310 aa5.93□□□□□ -1.46
HDAC1-202ENST00000428704 SCGB1D4Q6XE38 83 aa5.93□□□□□ -1.46
HDAC1-202ENST00000428704 Q6ZUT4 128 aa5.93□□□□□ -1.46
HDAC1-202ENST00000428704 C6orf223Q8N319 242 aa5.93□□□□□ -1.46
HDAC1-202ENST00000428704 CDC42SE2Q9NRR3 84 aa5.93□□□□□ -1.46
HDAC1-202ENST00000428704 F5H768 121 aa5.92□□□□□ -1.46
HDAC1-202ENST00000428704 IGHV3-30-3P0DP02 117 aa5.92□□□□□ -1.46
HDAC1-202ENST00000428704 HERVK_113P63121 156 aa5.92□□□□□ -1.46
HDAC1-202ENST00000428704 SRSF9Q13242 221 aaKnown RBP eCLIP5.92□□□□□ -1.46
HDAC1-202ENST00000428704 RNF151Q2KHN1 245 aa5.92□□□□□ -1.46
HDAC1-202ENST00000428704 GTF2H5Q6ZYL4 71 aa5.92□□□□□ -1.46
HDAC1-202ENST00000428704 C15orf53Q8NAA6 179 aa5.92□□□□□ -1.46
HDAC1-202ENST00000428704 VSIG2Q96IQ7 327 aa5.92□□□□□ -1.46
HDAC1-202ENST00000428704 TMEM243Q9BU79 118 aa5.92□□□□□ -1.46
HDAC1-202ENST00000428704 TRBV6-8A0A0A6YYG3 113 aa5.91□□□□□ -1.46
HDAC1-202ENST00000428704 A0A1W2PPM0 123 aa5.91□□□□□ -1.46
HDAC1-202ENST00000428704 GAGE10A6NGK3 116 aa5.91□□□□□ -1.46
HDAC1-202ENST00000428704 H3BUT2 72 aa5.91□□□□□ -1.46
HDAC1-202ENST00000428704 K7EP13 123 aa5.91□□□□□ -1.46
HDAC1-202ENST00000428704 IGHV3-30P01768 117 aa5.91□□□□□ -1.46
HDAC1-202ENST00000428704 IGHV3-30-5P0DP03 117 aa5.91□□□□□ -1.46
HDAC1-202ENST00000428704 KRTAP10-2P60368 255 aa5.91□□□□□ -1.46
HDAC1-202ENST00000428704 LINC00242Q5T6M2 205 aa5.91□□□□□ -1.46
HDAC1-202ENST00000428704 GEMIN7Q9H840 131 aaKnown RBP5.91□□□□□ -1.46
HDAC1-202ENST00000428704 NHP2Q9NX24 153 aaKnown RBP5.91□□□□□ -1.46
HDAC1-202ENST00000428704 IGLV5-39A0A0G2JS06 123 aa5.9□□□□□ -1.46
HDAC1-202ENST00000428704 K7EP34 96 aa5.9□□□□□ -1.46
HDAC1-202ENST00000428704 TIMM17BO60830 172 aa5.9□□□□□ -1.46
HDAC1-202ENST00000428704 TMEM101Q96IK0 257 aa5.9□□□□□ -1.46
HDAC1-202ENST00000428704 PRO0255Q9UI72 69 aa5.9□□□□□ -1.46
HDAC1-202ENST00000428704 TRAV26-1A0A087WT03 109 aa5.89□□□□□ -1.47
HDAC1-202ENST00000428704 A0A0J9YXY3 114 aa5.89□□□□□ -1.47
HDAC1-202ENST00000428704 TMEM238C9JI98 176 aa5.89□□□□□ -1.47
HDAC1-202ENST00000428704 FABP2P12104 132 aa5.89□□□□□ -1.47
HDAC1-202ENST00000428704 XGP55808 180 aa5.89□□□□□ -1.47
HDAC1-202ENST00000428704 C10orf126Q8N4M7 172 aa5.89□□□□□ -1.47
HDAC1-202ENST00000428704 RAB37Q96AX2 223 aa5.89□□□□□ -1.47
HDAC1-202ENST00000428704 CDKN2A-AS1Q9UH64 79 aa5.89□□□□□ -1.47
HDAC1-202ENST00000428704 TRAV8-3A0A0A6YYJ7 113 aa5.88□□□□□ -1.47
HDAC1-202ENST00000428704 LOC100131303A0A0U1RQF7 123 aa5.88□□□□□ -1.47
HDAC1-202ENST00000428704 NBDYA0A0U1RRE5 68 aa5.88□□□□□ -1.47
HDAC1-202ENST00000428704 A0A1B0GUV1 79 aa5.88□□□□□ -1.47
HDAC1-202ENST00000428704 UBE2L6O14933 153 aa5.88□□□□□ -1.47
HDAC1-202ENST00000428704 SMR3BP02814 79 aaPredicted RBP5.88□□□□□ -1.47
HDAC1-202ENST00000428704 COX6A2Q02221 97 aa5.88□□□□□ -1.47
HDAC1-202ENST00000428704 RNASE13Q5GAN3 156 aaKnown RBP5.88□□□□□ -1.47
HDAC1-202ENST00000428704 ATP6V0E2Q8NHE4 81 aa5.88□□□□□ -1.47
HDAC1-202ENST00000428704 SPANXDQ9BXN6 97 aa5.88□□□□□ -1.47
HDAC1-202ENST00000428704 PPDPFQ9H3Y8 114 aa5.88□□□□□ -1.47
HDAC1-202ENST00000428704 SPANXCQ9NY87 97 aa5.88□□□□□ -1.47
HDAC1-202ENST00000428704 NDUFA12Q9UI09 145 aa5.88□□□□□ -1.47
HDAC1-202ENST00000428704 LINC00588Q9Y4M8 146 aa5.88□□□□□ -1.47
HDAC1-202ENST00000428704 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.87□□□□□ -1.47
HDAC1-202ENST00000428704 KRTAP29-1A8MX34 341 aaPredicted RBP5.87□□□□□ -1.47
HDAC1-202ENST00000428704 H3BNG1 76 aa5.87□□□□□ -1.47
HDAC1-202ENST00000428704 NDUFA1O15239 70 aa5.87□□□□□ -1.47
HDAC1-202ENST00000428704 RPL24P83731 157 aaKnown RBP5.87□□□□□ -1.47
HDAC1-202ENST00000428704 LCE1DQ5T752 114 aa5.87□□□□□ -1.47
HDAC1-202ENST00000428704 LITAFQ99732 161 aa5.87□□□□□ -1.47
HDAC1-202ENST00000428704 SPCS1Q9Y6A9 102 aa5.87□□□□□ -1.47
HDAC1-202ENST00000428704 A0A0B4J2C4 111 aa5.86□□□□□ -1.47
HDAC1-202ENST00000428704 K7ERJ3 54 aa5.86□□□□□ -1.47
HDAC1-202ENST00000428704 SPINK8P0C7L1 97 aa5.86□□□□□ -1.47
HDAC1-202ENST00000428704 CFC1BP0CG36 223 aa5.86□□□□□ -1.47
HDAC1-202ENST00000428704 CFC1P0CG37 223 aa5.86□□□□□ -1.47
HDAC1-202ENST00000428704 IFITM1P13164 125 aa5.86□□□□□ -1.47
HDAC1-202ENST00000428704 GYPEP15421 78 aa5.86□□□□□ -1.47
HDAC1-202ENST00000428704 IGHV3-64A0A075B6Q5 118 aa5.85□□□□□ -1.47
HDAC1-202ENST00000428704 A0A096LPF7 62 aa5.85□□□□□ -1.47
HDAC1-202ENST00000428704 SMIM1B2RUZ4 78 aa5.85□□□□□ -1.47
HDAC1-202ENST00000428704 HERV-K104P63124 156 aa5.85□□□□□ -1.47
HDAC1-202ENST00000428704 ESRGQ1W209 222 aa5.85□□□□□ -1.47
HDAC1-202ENST00000428704 SH2D6Q7Z4S9 175 aa5.85□□□□□ -1.47
HDAC1-202ENST00000428704 MUSTN1Q8IVN3 82 aa5.85□□□□□ -1.47
HDAC1-202ENST00000428704 LINC01561Q8N1V8 128 aa5.85□□□□□ -1.47
HDAC1-202ENST00000428704 KRTAP1-5Q9BYS1 174 aa5.85□□□□□ -1.47
HDAC1-202ENST00000428704 TRAV13-1A0A0B4J241 112 aa5.84□□□□□ -1.47
HDAC1-202ENST00000428704 IGHV3OR16-9A0A0B4J2B5 98 aa5.84□□□□□ -1.47
HDAC1-202ENST00000428704 A4D1N5 150 aa5.84□□□□□ -1.47
HDAC1-202ENST00000428704 CCL18P55774 89 aa5.84□□□□□ -1.47
HDAC1-202ENST00000428704 GAGE6Q13070 117 aa5.84□□□□□ -1.47
HDAC1-202ENST00000428704 CIRBPQ14011 172 aaKnown RBP5.84□□□□□ -1.47
HDAC1-202ENST00000428704 MIAQ16674 131 aa5.84□□□□□ -1.47
HDAC1-202ENST00000428704 CHCHD5Q9BSY4 110 aa5.84□□□□□ -1.47
HDAC1-202ENST00000428704 UPK3BQ9BT76 320 aa5.84□□□□□ -1.47
HDAC1-202ENST00000428704 PRO1854Q9UHT4 67 aa5.84□□□□□ -1.47
HDAC1-202ENST00000428704 IGLV4-60A0A075B6I1 120 aa5.83□□□□□ -1.48
HDAC1-202ENST00000428704 F8W1H4 67 aa5.83□□□□□ -1.48
HDAC1-202ENST00000428704 ADAMTSL4-AS1Q5T5F5 129 aa5.83□□□□□ -1.48
HDAC1-202ENST00000428704 LYRM7Q5U5X0 104 aa5.83□□□□□ -1.48
HDAC1-202ENST00000428704 SFTA2Q6UW10 78 aa5.83□□□□□ -1.48
HDAC1-202ENST00000428704 ZNF625Q96I27 306 aaPredicted RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms