RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 COX17Q14061 63 aa11.09□□□□□ -0.63
C9orf3-206ENST00000428313 C10orf99Q6UWK7 81 aa11.09□□□□□ -0.63
C9orf3-206ENST00000428313 MUC7Q8TAX7 377 aa11.09□□□□□ -0.63
C9orf3-206ENST00000428313 SVEP1Q4LDE5 3571 aa11.08□□□□□ -0.64
C9orf3-206ENST00000428313 GNLYP22749 145 aa11.07□□□□□ -0.64
C9orf3-206ENST00000428313 ABCA2Q9BZC7 2435 aa11.07□□□□□ -0.64
C9orf3-206ENST00000428313 LINC00959A0A1B0GUT2 108 aa11.06□□□□□ -0.64
C9orf3-206ENST00000428313 SPATA3Q8NHX4 192 aa11.06□□□□□ -0.64
C9orf3-206ENST00000428313 AKAP13Q12802 2813 aa11.06□□□□□ -0.64
C9orf3-206ENST00000428313 OCR1Q9BZK8 76 aa11.06□□□□□ -0.64
C9orf3-206ENST00000428313 IGHV4-31P0DP07 118 aa11.04□□□□□ -0.64
C9orf3-206ENST00000428313 Q1T7F1 81 aa11.04□□□□□ -0.64
C9orf3-206ENST00000428313 SCXQ7RTU7 201 aa11.04□□□□□ -0.64
C9orf3-206ENST00000428313 RELNP78509 3460 aa11.04□□□□□ -0.64
C9orf3-206ENST00000428313 ZFHX3Q15911 3703 aa11.04□□□□□ -0.64
C9orf3-206ENST00000428313 TRBV6-8A0A0A6YYG3 113 aa11.04□□□□□ -0.64
C9orf3-206ENST00000428313 UBE2E2Q96LR5 201 aa11.04□□□□□ -0.64
C9orf3-206ENST00000428313 hDV103S1A0JD37 113 aa11.02□□□□□ -0.65
C9orf3-206ENST00000428313 BBC3Q96PG8 261 aaPredicted RBP11.02□□□□□ -0.65
C9orf3-206ENST00000428313 RIF1Q5UIP0 2472 aaKnown RBP11.01□□□□□ -0.65
C9orf3-206ENST00000428313 ZFHX2Q9C0A1 2572 aaPredicted RBP11.01□□□□□ -0.65
C9orf3-206ENST00000428313 PLA2G2AP14555 144 aa11.01□□□□□ -0.65
C9orf3-206ENST00000428313 Q6ZQY7 126 aa11.01□□□□□ -0.65
C9orf3-206ENST00000428313 SPTBN4Q9H254 2564 aa11.01□□□□□ -0.65
C9orf3-206ENST00000428313 ZNF292O60281 2723 aa11□□□□□ -0.65
C9orf3-206ENST00000428313 LOC100131303A0A0U1RQF7 123 aa11□□□□□ -0.65
C9orf3-206ENST00000428313 SPTAN1Q13813 2472 aaKnown RBP10.99□□□□□ -0.65
C9orf3-206ENST00000428313 IGHV4-28A0A0C4DH34 117 aa10.99□□□□□ -0.65
C9orf3-206ENST00000428313 IGKV4-1P06312 121 aa10.98□□□□□ -0.65
C9orf3-206ENST00000428313 CD164L2Q6UWJ8 174 aa10.98□□□□□ -0.65
C9orf3-206ENST00000428313 AKAP6Q13023 2319 aa10.98□□□□□ -0.65
C9orf3-206ENST00000428313 SLURP1P55000 103 aa10.98□□□□□ -0.65
C9orf3-206ENST00000428313 CD164Q04900 197 aa10.98□□□□□ -0.65
C9orf3-206ENST00000428313 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.98□□□□□ -0.653e-7■■□□□ 11.6
C9orf3-206ENST00000428313 IGHV4-61A0A0C4DH41 118 aa10.97□□□□□ -0.65
C9orf3-206ENST00000428313 KIAA0087Q14695 138 aa10.96□□□□□ -0.65
C9orf3-206ENST00000428313 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.96□□□□□ -0.65
C9orf3-206ENST00000428313 Q8NDZ9 215 aa10.96□□□□□ -0.65
C9orf3-206ENST00000428313 NOP10Q9NPE3 64 aaKnown RBP10.96□□□□□ -0.65
C9orf3-206ENST00000428313 HIGD2AQ9BW72 106 aa10.96□□□□□ -0.66
C9orf3-206ENST00000428313 ASH1LQ9NR48 2969 aaKnown RBP10.95□□□□□ -0.66
C9orf3-206ENST00000428313 ATMQ13315 3056 aa10.95□□□□□ -0.66
C9orf3-206ENST00000428313 C19orf84I3L1E1 186 aa10.95□□□□□ -0.66
C9orf3-206ENST00000428313 IGLV6-57P01721 117 aa10.95□□□□□ -0.66
C9orf3-206ENST00000428313 COX7BP24311 80 aa10.95□□□□□ -0.66
C9orf3-206ENST00000428313 Q6ZRP5 223 aa10.95□□□□□ -0.66
C9orf3-206ENST00000428313 IGHV4-30-2A0A087WSY4 118 aa10.95□□□□□ -0.66
C9orf3-206ENST00000428313 DAD1P61803 113 aa10.95□□□□□ -0.66
C9orf3-206ENST00000428313 STHQ8IWL8 128 aa10.95□□□□□ -0.66
C9orf3-206ENST00000428313 GVINP1Q7Z2Y8 2422 aa10.94□□□□□ -0.66
C9orf3-206ENST00000428313 TRGV2A0A075B6R0 118 aa10.94□□□□□ -0.66
C9orf3-206ENST00000428313 IGHV4-59P01825 116 aa10.93□□□□□ -0.66
C9orf3-206ENST00000428313 TRGV4A0A0C4DH28 118 aa10.93□□□□□ -0.66
C9orf3-206ENST00000428313 TLN1Q9Y490 2541 aaKnown RBP10.92□□□□□ -0.66
C9orf3-206ENST00000428313 LCE6AA0A183 80 aa10.92□□□□□ -0.66
C9orf3-206ENST00000428313 A0A1B0GUV1 79 aa10.92□□□□□ -0.66
C9orf3-206ENST00000428313 MSMBP08118 114 aa10.92□□□□□ -0.66
C9orf3-206ENST00000428313 DEFB114Q30KQ6 69 aa10.92□□□□□ -0.66
C9orf3-206ENST00000428313 C16orf74Q96GX8 76 aa10.92□□□□□ -0.66
C9orf3-206ENST00000428313 CCL24O00175 119 aa10.91□□□□□ -0.66
C9orf3-206ENST00000428313 ODF3L2Q3SX64 289 aa10.91□□□□□ -0.66
C9orf3-206ENST00000428313 CACNA1AO00555 2505 aa10.91□□□□□ -0.66
C9orf3-206ENST00000428313 DEFB136Q30KP8 78 aa10.9□□□□□ -0.66
C9orf3-206ENST00000428313 Q8N9L7 120 aa10.89□□□□□ -0.67
C9orf3-206ENST00000428313 C1orf64Q8NEQ6 169 aa10.89□□□□□ -0.67
C9orf3-206ENST00000428313 LINC01006Q8NI28 216 aa10.89□□□□□ -0.67
C9orf3-206ENST00000428313 CREBBPQ92793 2442 aa10.88□□□□□ -0.67
C9orf3-206ENST00000428313 DIRC1Q969H9 104 aa10.88□□□□□ -0.67
C9orf3-206ENST00000428313 SPTA1P02549 2419 aa10.88□□□□□ -0.67
C9orf3-206ENST00000428313 DEFB112Q30KQ8 113 aa10.88□□□□□ -0.67
C9orf3-206ENST00000428313 C9orf116Q5BN46 136 aaPredicted RBP10.88□□□□□ -0.67
C9orf3-206ENST00000428313 B4DSR2 109 aa10.87□□□□□ -0.67
C9orf3-206ENST00000428313 C18orf65Q6ZTR6 163 aa10.87□□□□□ -0.67
C9orf3-206ENST00000428313 ZNF702PQ9H963 129 aa10.86□□□□□ -0.67
C9orf3-206ENST00000428313 CCL19Q99731 98 aa10.86□□□□□ -0.67
C9orf3-206ENST00000428313 TRAV22A0A0B4J277 110 aa10.85□□□□□ -0.67
C9orf3-206ENST00000428313 KHDC1LQ5JSQ8 128 aa10.85□□□□□ -0.67
C9orf3-206ENST00000428313 ESM1Q9NQ30 184 aa10.85□□□□□ -0.67
C9orf3-206ENST00000428313 DSCR9P59020 149 aa10.84□□□□□ -0.67
C9orf3-206ENST00000428313 LINC00269Q8N2A0 174 aa10.84□□□□□ -0.67
C9orf3-206ENST00000428313 C2CD3Q4AC94 2353 aa10.84□□□□□ -0.67
C9orf3-206ENST00000428313 ZCCHC13Q8WW36 166 aaKnown RBP10.84□□□□□ -0.67
C9orf3-206ENST00000428313 CYP4F30PQ9H0H9 118 aa10.84□□□□□ -0.67
C9orf3-206ENST00000428313 CELA1Q9UNI1 258 aa10.84□□□□□ -0.67
C9orf3-206ENST00000428313 IGHV4-30-4P0DP06 118 aa10.83□□□□□ -0.68
C9orf3-206ENST00000428313 ELOF1P60002 83 aaKnown RBP10.83□□□□□ -0.68
C9orf3-206ENST00000428313 C4orf3Q8WVX3 66 aa10.83□□□□□ -0.68
C9orf3-206ENST00000428313 LRCOL1A6NCL2 159 aa10.82□□□□□ -0.68
C9orf3-206ENST00000428313 LYRM9A8MSI8 78 aa10.82□□□□□ -0.68
C9orf3-206ENST00000428313 PSPHP1O15172 72 aa10.82□□□□□ -0.68
C9orf3-206ENST00000428313 CLPSL2Q6UWE3 100 aa10.82□□□□□ -0.68
C9orf3-206ENST00000428313 LINC00612Q8N6U2 182 aa10.81□□□□□ -0.68
C9orf3-206ENST00000428313 CELSR1Q9NYQ6 3014 aa10.81□□□□□ -0.68
C9orf3-206ENST00000428313 ZNF73O43830 326 aaPredicted RBP10.81□□□□□ -0.68
C9orf3-206ENST00000428313 PRB1P04280 392 aa10.81□□□□□ -0.68
C9orf3-206ENST00000428313 RETNQ9HD89 108 aa10.81□□□□□ -0.68
C9orf3-206ENST00000428313 A0A0J9YWU9 116 aa10.8□□□□□ -0.68
C9orf3-206ENST00000428313 CHCHD10Q8WYQ3 142 aaPredicted RBP10.8□□□□□ -0.68
C9orf3-206ENST00000428313 CEP295Q9C0D2 2601 aa10.8□□□□□ -0.68
C9orf3-206ENST00000428313 GIG44P09565 113 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms