RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 CHCHD10Q8WYQ3 142 aaPredicted RBP9.59□□□□□ -0.87
APOBEC3D-202ENST00000427494 J3QR89 54 aa9.59□□□□□ -0.87
APOBEC3D-202ENST00000427494 Q8IZM0 81 aa9.59□□□□□ -0.87
APOBEC3D-202ENST00000427494 CYSRT1A8MQ03 144 aa9.58□□□□□ -0.88
APOBEC3D-202ENST00000427494 COX7A2LO14548 114 aa9.58□□□□□ -0.88
APOBEC3D-202ENST00000427494 SLC25A20O43772 301 aa9.58□□□□□ -0.88
APOBEC3D-202ENST00000427494 PFN2P35080 140 aa9.58□□□□□ -0.88
APOBEC3D-202ENST00000427494 LINC01620Q4KN68 170 aa9.58□□□□□ -0.88
APOBEC3D-202ENST00000427494 CLEC2BQ92478 149 aa9.57□□□□□ -0.88
APOBEC3D-202ENST00000427494 LYPD5Q6UWN5 251 aa9.56□□□□□ -0.88
APOBEC3D-202ENST00000427494 Q6ZTC4 211 aa9.56□□□□□ -0.88
APOBEC3D-202ENST00000427494 TEN1Q86WV5 123 aa9.56□□□□□ -0.88
APOBEC3D-202ENST00000427494 MALP21145 153 aa9.55□□□□□ -0.88
APOBEC3D-202ENST00000427494 FOXI1Q12951 378 aa9.55□□□□□ -0.88
APOBEC3D-202ENST00000427494 C2orf82Q6UX34 121 aa9.55□□□□□ -0.88
APOBEC3D-202ENST00000427494 ANKRD29Q8N6D5 301 aa9.55□□□□□ -0.88
APOBEC3D-202ENST00000427494 SND1-IT1Q9HBX3 110 aa9.55□□□□□ -0.88
APOBEC3D-202ENST00000427494 CKS1BP61024 79 aa9.55□□□□□ -0.88
APOBEC3D-202ENST00000427494 KPRPQ5T749 579 aaPredicted RBP9.55□□□□□ -0.88
APOBEC3D-202ENST00000427494 A0A0J9YWU9 116 aa9.54□□□□□ -0.88
APOBEC3D-202ENST00000427494 M0QXV9 152 aa9.54□□□□□ -0.88
APOBEC3D-202ENST00000427494 CCL18P55774 89 aa9.54□□□□□ -0.88
APOBEC3D-202ENST00000427494 CFAP161Q6P656 301 aa9.54□□□□□ -0.88
APOBEC3D-202ENST00000427494 KLK12Q9UKR0 248 aa9.54□□□□□ -0.88
APOBEC3D-202ENST00000427494 STAB1Q9NY15 2570 aa9.54□□□□□ -0.88
APOBEC3D-202ENST00000427494 CMYA5Q8N3K9 4069 aa9.54□□□□□ -0.88
APOBEC3D-202ENST00000427494 TRAV13-2A0A0B4J235 113 aa9.54□□□□□ -0.88
APOBEC3D-202ENST00000427494 H3BNG1 76 aa9.54□□□□□ -0.88
APOBEC3D-202ENST00000427494 LST1O00453 97 aa9.54□□□□□ -0.88
APOBEC3D-202ENST00000427494 CRPP02741 224 aa9.54□□□□□ -0.88
APOBEC3D-202ENST00000427494 PPDPFLQ8WWR9 84 aa9.54□□□□□ -0.88
APOBEC3D-202ENST00000427494 TRBV10-2A0A0K0K1G8 114 aa9.53□□□□□ -0.88
APOBEC3D-202ENST00000427494 KIAA0087Q14695 138 aa9.53□□□□□ -0.88
APOBEC3D-202ENST00000427494 IGKV2-28A0A075B6P5 120 aa9.52□□□□□ -0.89
APOBEC3D-202ENST00000427494 GAGE12HA6NDE8 117 aa9.52□□□□□ -0.89
APOBEC3D-202ENST00000427494 IGKV2D-28P01615 120 aa9.52□□□□□ -0.89
APOBEC3D-202ENST00000427494 CARD19Q96LW7 228 aa9.52□□□□□ -0.89
APOBEC3D-202ENST00000427494 CXCL5P42830 114 aa9.52□□□□□ -0.89
APOBEC3D-202ENST00000427494 LINC00337Q8N6G1 96 aa9.52□□□□□ -0.89
APOBEC3D-202ENST00000427494 PRR34Q9NV39 138 aa9.52□□□□□ -0.89
APOBEC3D-202ENST00000427494 NANOS2P60321 138 aaKnown RBP9.51□□□□□ -0.89
APOBEC3D-202ENST00000427494 PKD1L1Q8TDX9 2849 aa9.5□□□□□ -0.89
APOBEC3D-202ENST00000427494 ENHOQ6UWT2 76 aa9.5□□□□□ -0.89
APOBEC3D-202ENST00000427494 WFDC10BQ8IUB3 73 aa9.49□□□□□ -0.89
APOBEC3D-202ENST00000427494 C11orf45Q8TAV5 145 aa9.49□□□□□ -0.89
APOBEC3D-202ENST00000427494 PRB2P02812 416 aaPredicted RBP9.48□□□□□ -0.89
APOBEC3D-202ENST00000427494 LINC01600Q96MT4 127 aa9.48□□□□□ -0.89
APOBEC3D-202ENST00000427494 KLK5Q9Y337 293 aaPredicted RBP9.48□□□□□ -0.89
APOBEC3D-202ENST00000427494 DEFB131BA0A096LNP1 70 aa9.48□□□□□ -0.89
APOBEC3D-202ENST00000427494 H3BT86 120 aa9.48□□□□□ -0.89
APOBEC3D-202ENST00000427494 PCP4P48539 62 aa9.48□□□□□ -0.89
APOBEC3D-202ENST00000427494 SPAG11BQ08648 103 aa9.48□□□□□ -0.89
APOBEC3D-202ENST00000427494 NTN5Q8WTR8 489 aaPredicted RBP9.48□□□□□ -0.89
APOBEC3D-202ENST00000427494 UBE2WQ96B02 151 aa9.48□□□□□ -0.89
APOBEC3D-202ENST00000427494 MAST4O15021 2626 aa9.48□□□□□ -0.89
APOBEC3D-202ENST00000427494 COX17Q14061 63 aa9.47□□□□□ -0.89
APOBEC3D-202ENST00000427494 DNAH3Q8TD57 4116 aa9.47□□□□□ -0.89
APOBEC3D-202ENST00000427494 RPL28P46779 137 aaKnown RBP9.46□□□□□ -0.89
APOBEC3D-202ENST00000427494 SPATA25Q9BR10 227 aa9.46□□□□□ -0.89
APOBEC3D-202ENST00000427494 J3QL48 77 aa9.46□□□□□ -0.9
APOBEC3D-202ENST00000427494 ESRGQ1W209 222 aa9.46□□□□□ -0.9
APOBEC3D-202ENST00000427494 C9orf116Q5BN46 136 aaPredicted RBP9.46□□□□□ -0.9
APOBEC3D-202ENST00000427494 C6orf223Q8N319 242 aa9.46□□□□□ -0.9
APOBEC3D-202ENST00000427494 SVIPQ8NHG7 77 aa9.46□□□□□ -0.9
APOBEC3D-202ENST00000427494 BAHCC1Q9P281 2608 aa9.45□□□□□ -0.9
APOBEC3D-202ENST00000427494 TRAV8-4A0A0B4J246 113 aa9.45□□□□□ -0.9
APOBEC3D-202ENST00000427494 OR13C6PQ8NH95 151 aa9.45□□□□□ -0.9
APOBEC3D-202ENST00000427494 SMIM11BQ8TCY0 68 aa9.45□□□□□ -0.9
APOBEC3D-202ENST00000427494 LINC00526Q96FQ7 95 aa9.44□□□□□ -0.9
APOBEC3D-202ENST00000427494 UNQ6190/PRO20217Q6UXQ8 127 aa9.44□□□□□ -0.9
APOBEC3D-202ENST00000427494 ANK2Q01484 3957 aa9.43□□□□□ -0.9
APOBEC3D-202ENST00000427494 TEX49A0A1B0GTD5 131 aa9.43□□□□□ -0.9
APOBEC3D-202ENST00000427494 C10orf25Q5T742 122 aa9.43□□□□□ -0.9
APOBEC3D-202ENST00000427494 FAM218AQ96MZ4 157 aa9.43□□□□□ -0.9
APOBEC3D-202ENST00000427494 TENM3Q9P273 2699 aa9.43□□□□□ -0.9
APOBEC3D-202ENST00000427494 TRACP01848 142 aa9.43□□□□□ -0.9
APOBEC3D-202ENST00000427494 C21orf62-AS1Q17RA5 79 aa9.43□□□□□ -0.9
APOBEC3D-202ENST00000427494 K7EIL1 84 aa9.42□□□□□ -0.9
APOBEC3D-202ENST00000427494 SIGMAR1Q99720 223 aa9.42□□□□□ -0.9
APOBEC3D-202ENST00000427494 DEFB121Q5J5C9 76 aa9.41□□□□□ -0.9
APOBEC3D-202ENST00000427494 MRAPQ8TCY5 172 aa9.41□□□□□ -0.9
APOBEC3D-202ENST00000427494 TM2D3Q9BRN9 247 aa9.41□□□□□ -0.9
APOBEC3D-202ENST00000427494 CDIP1Q9H305 208 aa9.41□□□□□ -0.9
APOBEC3D-202ENST00000427494 NDUFC2O95298 119 aa9.4□□□□□ -0.9
APOBEC3D-202ENST00000427494 PRR3P79522 188 aaKnown RBP9.4□□□□□ -0.9
APOBEC3D-202ENST00000427494 TRAV10A0A0B4J240 114 aa9.39□□□□□ -0.91
APOBEC3D-202ENST00000427494 COL6A5A8TX70 2615 aa9.38□□□□□ -0.91
APOBEC3D-202ENST00000427494 H0YGX0 51 aa9.38□□□□□ -0.91
APOBEC3D-202ENST00000427494 LINC01556Q5JQF7 62 aa9.38□□□□□ -0.91
APOBEC3D-202ENST00000427494 KRTAP26-1Q6PEX3 210 aa9.38□□□□□ -0.91
APOBEC3D-202ENST00000427494 MUC7Q8TAX7 377 aa9.37□□□□□ -0.91
APOBEC3D-202ENST00000427494 A0A087WYN8 130 aa9.37□□□□□ -0.91
APOBEC3D-202ENST00000427494 NCR3O14931 201 aa9.37□□□□□ -0.91
APOBEC3D-202ENST00000427494 BAALC-AS2P0C853 105 aa9.37□□□□□ -0.91
APOBEC3D-202ENST00000427494 HIGD2BQ4VC39 106 aa9.37□□□□□ -0.91
APOBEC3D-202ENST00000427494 Q9HAA7 133 aa9.37□□□□□ -0.91
APOBEC3D-202ENST00000427494 GVQW2A0A096LPI5 108 aaPredicted RBP9.36□□□□□ -0.91
APOBEC3D-202ENST00000427494 ZNF561-AS1K7EIQ3 104 aa9.36□□□□□ -0.91
APOBEC3D-202ENST00000427494 Q8NDZ9 215 aa9.36□□□□□ -0.91
APOBEC3D-202ENST00000427494 C6orf48Q9UBA6 75 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms