RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 CXCL5P42830 114 aa5.33□□□□□ -1.56
LINC01108-201ENST00000427276 CCL18P55774 89 aa5.33□□□□□ -1.56
LINC01108-201ENST00000427276 LINC01600Q96MT4 127 aa5.33□□□□□ -1.56
LINC01108-201ENST00000427276 GHRHP01286 108 aa5.32□□□□□ -1.56
LINC01108-201ENST00000427276 DEFB130BP0DP73 79 aa5.32□□□□□ -1.56
LINC01108-201ENST00000427276 DEFB130AP0DP74 79 aa5.32□□□□□ -1.56
LINC01108-201ENST00000427276 RPL18AQ02543 176 aaKnown RBP5.32□□□□□ -1.56
LINC01108-201ENST00000427276 WFDC10AQ9H1F0 79 aa5.32□□□□□ -1.56
LINC01108-201ENST00000427276 IGKV2-28A0A075B6P5 120 aa5.32□□□□□ -1.56
LINC01108-201ENST00000427276 IGLV5-45A0A087WSX0 123 aa5.32□□□□□ -1.56
LINC01108-201ENST00000427276 USP17L23D6RBM5 183 aa5.32□□□□□ -1.56
LINC01108-201ENST00000427276 IGKV2D-28P01615 120 aa5.32□□□□□ -1.56
LINC01108-201ENST00000427276 IGLV4-60A0A075B6I1 120 aa5.32□□□□□ -1.56
LINC01108-201ENST00000427276 BEAN1Q3B7T3 259 aa5.32□□□□□ -1.56
LINC01108-201ENST00000427276 DOPEY1Q5JWR5 2465 aa5.32□□□□□ -1.56
LINC01108-201ENST00000427276 HIVEP2P31629 2446 aa5.32□□□□□ -1.56
LINC01108-201ENST00000427276 RPL28P46779 137 aaKnown RBP5.31□□□□□ -1.56
LINC01108-201ENST00000427276 C22orf24Q9Y442 160 aa5.31□□□□□ -1.56
LINC01108-201ENST00000427276 C1orf158Q8N1D5 194 aa5.31□□□□□ -1.56
LINC01108-201ENST00000427276 LINC01356Q8N9X3 169 aa5.31□□□□□ -1.56
LINC01108-201ENST00000427276 ORMDL1Q9P0S3 153 aa5.31□□□□□ -1.56
LINC01108-201ENST00000427276 DEFB114Q30KQ6 69 aa5.3□□□□□ -1.56
LINC01108-201ENST00000427276 ZNF702PQ9H963 129 aa5.3□□□□□ -1.56
LINC01108-201ENST00000427276 ENHOQ6UWT2 76 aa5.3□□□□□ -1.56
LINC01108-201ENST00000427276 IGLV10-54A0A075B6I4 117 aa5.3□□□□□ -1.56
LINC01108-201ENST00000427276 H0YGX0 51 aa5.3□□□□□ -1.56
LINC01108-201ENST00000427276 ODF3L2Q3SX64 289 aa5.3□□□□□ -1.56
LINC01108-201ENST00000427276 C20orf197Q8N268 126 aa5.3□□□□□ -1.56
LINC01108-201ENST00000427276 AKAP9Q99996 3911 aa5.3□□□□□ -1.56
LINC01108-201ENST00000427276 FAM222AQ5U5X8 452 aa5.29□□□□□ -1.56
LINC01108-201ENST00000427276 FAM19A1Q7Z5A9 133 aa5.29□□□□□ -1.56
LINC01108-201ENST00000427276 TMEM86BQ8N661 226 aa5.29□□□□□ -1.56
LINC01108-201ENST00000427276 SERP2Q8N6R1 65 aa5.29□□□□□ -1.56
LINC01108-201ENST00000427276 C2orf48Q96LS8 159 aa5.29□□□□□ -1.56
LINC01108-201ENST00000427276 OVOL2Q9BRP0 275 aa5.29□□□□□ -1.56
LINC01108-201ENST00000427276 A0A0U1RQV1 116 aa5.29□□□□□ -1.56
LINC01108-201ENST00000427276 HAMPP81172 84 aa5.29□□□□□ -1.56
LINC01108-201ENST00000427276 HRCT1Q6UXD1 115 aa5.29□□□□□ -1.56
LINC01108-201ENST00000427276 LINC00336Q6ZUF6 198 aa5.28□□□□□ -1.56
LINC01108-201ENST00000427276 LAMTOR3Q9UHA4 124 aa5.28□□□□□ -1.56
LINC01108-201ENST00000427276 PLA2G2DQ9UNK4 145 aa5.28□□□□□ -1.56
LINC01108-201ENST00000427276 H3BS24 57 aa5.28□□□□□ -1.56
LINC01108-201ENST00000427276 CRYGAP11844 174 aa5.28□□□□□ -1.56
LINC01108-201ENST00000427276 LINC01561Q8N1V8 128 aa5.28□□□□□ -1.56
LINC01108-201ENST00000427276 ESM1Q9NQ30 184 aa5.28□□□□□ -1.56
LINC01108-201ENST00000427276 TRBV10-1A0A0K0K1A3 114 aa5.28□□□□□ -1.56
LINC01108-201ENST00000427276 CCL24O00175 119 aa5.28□□□□□ -1.56
LINC01108-201ENST00000427276 A8MTW9 85 aa5.27□□□□□ -1.57
LINC01108-201ENST00000427276 UBR5O95071 2799 aaPredicted RBP5.27□□□□□ -1.57
LINC01108-201ENST00000427276 S100A7L2Q5SY68 101 aa5.27□□□□□ -1.57
LINC01108-201ENST00000427276 Q6JHZ5 121 aa5.27□□□□□ -1.57
LINC01108-201ENST00000427276 C9orf116Q5BN46 136 aaPredicted RBP5.26□□□□□ -1.57
LINC01108-201ENST00000427276 DPH3Q96FX2 82 aa5.26□□□□□ -1.57
LINC01108-201ENST00000427276 NOTCH2Q04721 2471 aa5.26□□□□□ -1.57
LINC01108-201ENST00000427276 UBL5Q9BZL1 73 aa5.26□□□□□ -1.57
LINC01108-201ENST00000427276 APCP25054 2843 aa5.25□□□□□ -1.57
LINC01108-201ENST00000427276 IBA57-AS1B1ANH7 110 aa5.25□□□□□ -1.57
LINC01108-201ENST00000427276 OXTP01178 125 aa5.25□□□□□ -1.57
LINC01108-201ENST00000427276 Q6YL49 198 aa5.25□□□□□ -1.57
LINC01108-201ENST00000427276 WFDC11Q8NEX6 87 aa5.25□□□□□ -1.57
LINC01108-201ENST00000427276 PRO0628Q9UI54 55 aa5.25□□□□□ -1.57
LINC01108-201ENST00000427276 TRBV6-8A0A0A6YYG3 113 aa5.25□□□□□ -1.57
LINC01108-201ENST00000427276 TMEM258P61165 79 aa5.25□□□□□ -1.57
LINC01108-201ENST00000427276 FHL2Q14192 279 aa5.25□□□□□ -1.57
LINC01108-201ENST00000427276 C6orf99Q4VX62 202 aa5.25□□□□□ -1.57
LINC01108-201ENST00000427276 SCXQ7RTU7 201 aa5.25□□□□□ -1.57
LINC01108-201ENST00000427276 SS18Q15532 418 aa5.24□□□□□ -1.57
LINC01108-201ENST00000427276 UPK3BQ9BT76 320 aa5.24□□□□□ -1.57
LINC01108-201ENST00000427276 IGHV3OR16-9A0A0B4J2B5 98 aa5.24□□□□□ -1.57
LINC01108-201ENST00000427276 FAM236DA0A1B0GTK5 79 aa5.24□□□□□ -1.57
LINC01108-201ENST00000427276 TRBV6-4A0A1B0GX49 114 aa5.24□□□□□ -1.57
LINC01108-201ENST00000427276 FAM236CP0DP71 79 aa5.24□□□□□ -1.57
LINC01108-201ENST00000427276 GYPEP15421 78 aa5.24□□□□□ -1.57
LINC01108-201ENST00000427276 LINC00269Q8N2A0 174 aa5.24□□□□□ -1.57
LINC01108-201ENST00000427276 SNURFQ9Y675 71 aa5.24□□□□□ -1.57
LINC01108-201ENST00000427276 LINC00959A0A1B0GUT2 108 aa5.24□□□□□ -1.57
LINC01108-201ENST00000427276 DEFB4AO15263 64 aa5.24□□□□□ -1.57
LINC01108-201ENST00000427276 CCKP06307 115 aa5.24□□□□□ -1.57
LINC01108-201ENST00000427276 C4orf3Q8WVX3 66 aa5.24□□□□□ -1.57
LINC01108-201ENST00000427276 NBPF19A0A087WUL8 3843 aa5.23□□□□□ -1.57
LINC01108-201ENST00000427276 HTN3P15516 51 aa5.23□□□□□ -1.57
LINC01108-201ENST00000427276 C1orf195Q5TG92 126 aa5.23□□□□□ -1.57
LINC01108-201ENST00000427276 LINC00528Q8N1L1 170 aa5.23□□□□□ -1.57
LINC01108-201ENST00000427276 A0A087WZ39 114 aa5.22□□□□□ -1.57
LINC01108-201ENST00000427276 ANGP03950 147 aaKnown RBP5.22□□□□□ -1.57
LINC01108-201ENST00000427276 JMJD7-PLA2G4BH0Y9G9 81 aa5.22□□□□□ -1.57
LINC01108-201ENST00000427276 Q8N814 137 aa5.22□□□□□ -1.57
LINC01108-201ENST00000427276 FLNAP21333 2647 aaKnown RBP5.22□□□□□ -1.57
LINC01108-201ENST00000427276 TMEM256-PLSCR3K7ERE1 68 aa5.22□□□□□ -1.57
LINC01108-201ENST00000427276 C16orf74Q96GX8 76 aa5.22□□□□□ -1.57
LINC01108-201ENST00000427276 Q8N3U1 123 aa5.21□□□□□ -1.58
LINC01108-201ENST00000427276 DSCR9P59020 149 aa5.21□□□□□ -1.58
LINC01108-201ENST00000427276 RBM3P98179 157 aaKnown RBP5.21□□□□□ -1.58
LINC01108-201ENST00000427276 IGHV4-31P0DP07 118 aa5.2□□□□□ -1.58
LINC01108-201ENST00000427276 CR1P17927 2039 aa5.2□□□□□ -1.58
LINC01108-201ENST00000427276 ZNF469Q96JG9 3925 aaPredicted RBP5.2□□□□□ -1.58
LINC01108-201ENST00000427276 SERTAD4-AS1Q5TG53 156 aa5.2□□□□□ -1.58
LINC01108-201ENST00000427276 M0R2N4 97 aa5.2□□□□□ -1.58
LINC01108-201ENST00000427276 KRTAP10-9P60411 292 aa5.2□□□□□ -1.58
LINC01108-201ENST00000427276 VPREB1P12018 145 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms