RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 NDUFC2-KCTD14E9PQ53 114 aa6.03□□□□□ -1.44
GACAT3-201ENST00000426539 LINC00173Q6ZV60 143 aa6.03□□□□□ -1.44
GACAT3-201ENST00000426539 ATP5L2Q7Z4Y8 100 aa6.03□□□□□ -1.44
GACAT3-201ENST00000426539 TMEM141Q96I45 108 aa6.03□□□□□ -1.44
GACAT3-201ENST00000426539 LOC389332A0A1B0GUA5 103 aa6.02□□□□□ -1.45
GACAT3-201ENST00000426539 UQCC3Q6UW78 93 aa6.02□□□□□ -1.45
GACAT3-201ENST00000426539 LINC01561Q8N1V8 128 aa6.02□□□□□ -1.45
GACAT3-201ENST00000426539 AMELXQ99217 191 aa6.02□□□□□ -1.45
GACAT3-201ENST00000426539 IGLV1-50A0A075B6I6 118 aa6.01□□□□□ -1.45
GACAT3-201ENST00000426539 UBE2BP63146 152 aa6.01□□□□□ -1.45
GACAT3-201ENST00000426539 C2orf66Q6UXQ4 117 aa6.01□□□□□ -1.45
GACAT3-201ENST00000426539 TEX43Q6ZNM6 134 aa6.01□□□□□ -1.45
GACAT3-201ENST00000426539 IGIPA6NJ69 53 aa6□□□□□ -1.45
GACAT3-201ENST00000426539 Q8N8P6 123 aa6□□□□□ -1.45
GACAT3-201ENST00000426539 PACRGQ96M98 296 aaPredicted RBP6□□□□□ -1.45
GACAT3-201ENST00000426539 MAP1LC3AQ9H492 121 aa6□□□□□ -1.45
GACAT3-201ENST00000426539 LAMTOR2Q9Y2Q5 125 aa6□□□□□ -1.45
GACAT3-201ENST00000426539 FAM19A3Q7Z5A8 133 aa5.99□□□□□ -1.45
GACAT3-201ENST00000426539 LINC00469Q8N7U9 141 aa5.99□□□□□ -1.45
GACAT3-201ENST00000426539 C2orf88Q9BSF0 95 aa5.99□□□□□ -1.45
GACAT3-201ENST00000426539 CYSLTR1Q9Y271 337 aa5.99□□□□□ -1.45
GACAT3-201ENST00000426539 Q6ZN92 141 aa5.98□□□□□ -1.45
GACAT3-201ENST00000426539 Q8IZM0 81 aa5.98□□□□□ -1.45
GACAT3-201ENST00000426539 VCX2Q9H322 139 aa5.98□□□□□ -1.45
GACAT3-201ENST00000426539 XAGE1AQ9HD64 81 aa5.98□□□□□ -1.45
GACAT3-201ENST00000426539 TOMM7Q9P0U1 55 aa5.98□□□□□ -1.45
GACAT3-201ENST00000426539 C22orf24Q9Y442 160 aa5.98□□□□□ -1.45
GACAT3-201ENST00000426539 TMEM218A2RU14 115 aa5.97□□□□□ -1.45
GACAT3-201ENST00000426539 ZNF861PO60384 105 aa5.97□□□□□ -1.45
GACAT3-201ENST00000426539 NPSP0C0P6 89 aa5.97□□□□□ -1.45
GACAT3-201ENST00000426539 ORMDL2Q53FV1 153 aa5.97□□□□□ -1.45
GACAT3-201ENST00000426539 CDKN2A-AS1Q9UH64 79 aa5.97□□□□□ -1.45
GACAT3-201ENST00000426539 PRSS2P07478 247 aa5.96□□□□□ -1.46
GACAT3-201ENST00000426539 CKS1BP61024 79 aa5.96□□□□□ -1.46
GACAT3-201ENST00000426539 C6orf226Q5I0X4 101 aa5.96□□□□□ -1.46
GACAT3-201ENST00000426539 ALKBH7Q9BT30 221 aaPredicted RBP5.96□□□□□ -1.46
GACAT3-201ENST00000426539 CARHSP1Q9Y2V2 147 aaKnown RBP5.96□□□□□ -1.46
GACAT3-201ENST00000426539 K7EMI3 77 aa5.95□□□□□ -1.46
GACAT3-201ENST00000426539 NUPR1O60356 82 aa5.95□□□□□ -1.46
GACAT3-201ENST00000426539 APOC3P02656 99 aa5.95□□□□□ -1.46
GACAT3-201ENST00000426539 MT-ND4LP03901 98 aa5.95□□□□□ -1.46
GACAT3-201ENST00000426539 RPL13AP40429 203 aaKnown RBP5.95□□□□□ -1.46
GACAT3-201ENST00000426539 PNRC1Q12796 327 aaPredicted RBP5.95□□□□□ -1.46
GACAT3-201ENST00000426539 PRR4Q16378 134 aa5.95□□□□□ -1.46
GACAT3-201ENST00000426539 CTDSP1Q9GZU7 261 aa5.95□□□□□ -1.46
GACAT3-201ENST00000426539 F8VRH5 84 aa5.94□□□□□ -1.46
GACAT3-201ENST00000426539 HERVK_113P63121 156 aa5.94□□□□□ -1.46
GACAT3-201ENST00000426539 C10orf91Q5T1B1 145 aa5.94□□□□□ -1.46
GACAT3-201ENST00000426539 TOMM6Q96B49 74 aa5.94□□□□□ -1.46
GACAT3-201ENST00000426539 TIMM17AQ99595 171 aa5.94□□□□□ -1.46
GACAT3-201ENST00000426539 SEC11CQ9BY50 192 aa5.94□□□□□ -1.46
GACAT3-201ENST00000426539 NXT2Q9NPJ8 142 aaKnown RBP5.94□□□□□ -1.46
GACAT3-201ENST00000426539 A0A087X002 238 aa5.93□□□□□ -1.46
GACAT3-201ENST00000426539 SMIM1B2RUZ4 78 aa5.93□□□□□ -1.46
GACAT3-201ENST00000426539 KIAA1644Q3SXP7 199 aa5.93□□□□□ -1.46
GACAT3-201ENST00000426539 LBHQ53QV2 105 aaPredicted RBP5.93□□□□□ -1.46
GACAT3-201ENST00000426539 MRPL55Q7Z7F7 128 aaKnown RBP5.93□□□□□ -1.46
GACAT3-201ENST00000426539 SVBPQ8N300 66 aa5.93□□□□□ -1.46
GACAT3-201ENST00000426539 KRTAP9-9Q9BYP9 154 aa5.93□□□□□ -1.46
GACAT3-201ENST00000426539 KRTAP9-4Q9BYQ2 154 aa5.93□□□□□ -1.46
GACAT3-201ENST00000426539 TP73-AS1Q9UF72 201 aa5.93□□□□□ -1.46
GACAT3-201ENST00000426539 BCE1O60756 84 aa5.92□□□□□ -1.46
GACAT3-201ENST00000426539 SCO1O75880 301 aa5.92□□□□□ -1.46
GACAT3-201ENST00000426539 ADCYAP1P18509 176 aa5.92□□□□□ -1.46
GACAT3-201ENST00000426539 SEC11AP67812 179 aa5.92□□□□□ -1.46
GACAT3-201ENST00000426539 GEMIN7Q9H840 131 aaKnown RBP5.92□□□□□ -1.46
GACAT3-201ENST00000426539 IGLV5-45A0A087WSX0 123 aa5.91□□□□□ -1.46
GACAT3-201ENST00000426539 SNAPINO95295 136 aa5.91□□□□□ -1.46
GACAT3-201ENST00000426539 TSPAN13O95857 204 aa5.91□□□□□ -1.46
GACAT3-201ENST00000426539 CXCL5P42830 114 aa5.91□□□□□ -1.46
GACAT3-201ENST00000426539 PAPPA-AS1Q5QFB9 102 aa5.91□□□□□ -1.46
GACAT3-201ENST00000426539 ERASQ7Z444 233 aa5.91□□□□□ -1.46
GACAT3-201ENST00000426539 LINC00167Q96N53 147 aa5.91□□□□□ -1.46
GACAT3-201ENST00000426539 RPL37AP8A6NKH3 93 aa5.9□□□□□ -1.46
GACAT3-201ENST00000426539 RPL28P46779 137 aaKnown RBP5.9□□□□□ -1.46
GACAT3-201ENST00000426539 PDZD11Q5EBL8 140 aa5.9□□□□□ -1.46
GACAT3-201ENST00000426539 COX7B2Q8TF08 81 aa5.9□□□□□ -1.46
GACAT3-201ENST00000426539 SCGB3A1Q96QR1 104 aa5.9□□□□□ -1.46
GACAT3-201ENST00000426539 ANAPC11Q9NYG5 84 aa5.9□□□□□ -1.46
GACAT3-201ENST00000426539 MUC2Q02817 5179 aa5.9□□□□□ -1.47
GACAT3-201ENST00000426539 IGLV5-37A0A075B6J1 123 aa5.89□□□□□ -1.47
GACAT3-201ENST00000426539 TINCRA0A1B0GVN0 87 aa5.89□□□□□ -1.47
GACAT3-201ENST00000426539 GAGE10A6NGK3 116 aa5.89□□□□□ -1.47
GACAT3-201ENST00000426539 LINC01546A6NGU7 62 aa5.89□□□□□ -1.47
GACAT3-201ENST00000426539 G0S2P27469 103 aa5.89□□□□□ -1.47
GACAT3-201ENST00000426539 KRTAP13-1Q8IUC0 172 aa5.89□□□□□ -1.47
GACAT3-201ENST00000426539 SPINK8P0C7L1 97 aa5.88□□□□□ -1.47
GACAT3-201ENST00000426539 KRTAP13-2Q52LG2 175 aa5.88□□□□□ -1.47
GACAT3-201ENST00000426539 CST9LQ9H4G1 147 aa5.88□□□□□ -1.47
GACAT3-201ENST00000426539 CRYGAP11844 174 aa5.87□□□□□ -1.47
GACAT3-201ENST00000426539 RAB5BP61020 215 aa5.87□□□□□ -1.47
GACAT3-201ENST00000426539 TYMSOSQ8TAI1 123 aa5.87□□□□□ -1.47
GACAT3-201ENST00000426539 TRAV9-1A0A075B6T8 112 aa5.85□□□□□ -1.47
GACAT3-201ENST00000426539 PMVKQ15126 192 aa5.85□□□□□ -1.47
GACAT3-201ENST00000426539 RHEBQ15382 184 aa5.85□□□□□ -1.47
GACAT3-201ENST00000426539 RPS10P5Q9NQ39 176 aa5.85□□□□□ -1.47
GACAT3-201ENST00000426539 SMCO4Q9NRQ5 59 aa5.85□□□□□ -1.47
GACAT3-201ENST00000426539 UBE2AP49459 152 aa5.84□□□□□ -1.47
GACAT3-201ENST00000426539 GNB1LQ9BYB4 327 aa5.84□□□□□ -1.47
GACAT3-201ENST00000426539 IGKV2-28A0A075B6P5 120 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms