RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 LINC00269Q8N2A0 174 aa9.45□□□□□ -0.9
USP42-203ENST00000426246 SPANXDQ9BXN6 97 aa9.45□□□□□ -0.9
USP42-203ENST00000426246 SPANXCQ9NY87 97 aa9.45□□□□□ -0.9
USP42-203ENST00000426246 A0A087WYN8 130 aa9.44□□□□□ -0.9
USP42-203ENST00000426246 COX7A2LO14548 114 aa9.44□□□□□ -0.9
USP42-203ENST00000426246 LINC00337Q8N6G1 96 aa9.44□□□□□ -0.9
USP42-203ENST00000426246 WFDC9Q8NEX5 89 aa9.44□□□□□ -0.9
USP42-203ENST00000426246 MRPL23Q16540 153 aaKnown RBP9.44□□□□□ -0.9
USP42-203ENST00000426246 CFAP161Q6P656 301 aa9.43□□□□□ -0.9
USP42-203ENST00000426246 SMIM11BQ8TCY0 68 aa9.43□□□□□ -0.9
USP42-203ENST00000426246 H3BT86 120 aa9.42□□□□□ -0.9
USP42-203ENST00000426246 CCL18P55774 89 aa9.42□□□□□ -0.9
USP42-203ENST00000426246 TIRAPP58753 221 aa9.42□□□□□ -0.9
USP42-203ENST00000426246 A0A087WVE0 104 aa9.42□□□□□ -0.9
USP42-203ENST00000426246 FAM222AQ5U5X8 452 aa9.42□□□□□ -0.9
USP42-203ENST00000426246 S100A7L2Q5SY68 101 aa9.41□□□□□ -0.9
USP42-203ENST00000426246 TRBV6-8A0A0A6YYG3 113 aa9.41□□□□□ -0.9
USP42-203ENST00000426246 C16orf74Q96GX8 76 aa9.41□□□□□ -0.9
USP42-203ENST00000426246 C9orf129Q5T035 196 aaKnown RBP9.4□□□□□ -0.9
USP42-203ENST00000426246 KLK5Q9Y337 293 aaPredicted RBP9.4□□□□□ -0.9
USP42-203ENST00000426246 CMYA5Q8N3K9 4069 aa9.4□□□□□ -0.9
USP42-203ENST00000426246 HERV-K104P63124 156 aa9.4□□□□□ -0.9
USP42-203ENST00000426246 SS18Q15532 418 aa9.4□□□□□ -0.9
USP42-203ENST00000426246 BEAN1Q3B7T3 259 aa9.39□□□□□ -0.91
USP42-203ENST00000426246 C9orf153Q5TBE3 101 aa9.39□□□□□ -0.91
USP42-203ENST00000426246 SPATA3Q8NHX4 192 aa9.39□□□□□ -0.91
USP42-203ENST00000426246 SBSPONQ8IVN8 264 aa9.39□□□□□ -0.91
USP42-203ENST00000426246 COPS9Q8WXC6 57 aa9.39□□□□□ -0.91
USP42-203ENST00000426246 NHLRC4P0CG21 123 aaPredicted RBP9.38□□□□□ -0.91
USP42-203ENST00000426246 XAGE1AQ9HD64 81 aa9.38□□□□□ -0.91
USP42-203ENST00000426246 TRAV13-2A0A0B4J235 113 aa9.38□□□□□ -0.91
USP42-203ENST00000426246 TRBV10-1A0A0K0K1A3 114 aa9.38□□□□□ -0.91
USP42-203ENST00000426246 KLK12Q9UKR0 248 aa9.38□□□□□ -0.91
USP42-203ENST00000426246 DAD1P61803 113 aa9.37□□□□□ -0.91
USP42-203ENST00000426246 SVIPQ8NHG7 77 aa9.37□□□□□ -0.91
USP42-203ENST00000426246 LAMTOR3Q9UHA4 124 aa9.37□□□□□ -0.91
USP42-203ENST00000426246 GIG44P09565 113 aaPredicted RBP9.36□□□□□ -0.91
USP42-203ENST00000426246 C6orf223Q8N319 242 aa9.36□□□□□ -0.91
USP42-203ENST00000426246 FHL2Q14192 279 aa9.36□□□□□ -0.91
USP42-203ENST00000426246 FAM110AQ9BQ89 295 aa9.36□□□□□ -0.91
USP42-203ENST00000426246 LINC00959A0A1B0GUT2 108 aa9.36□□□□□ -0.91
USP42-203ENST00000426246 CITED1Q99966 193 aa9.36□□□□□ -0.91
USP42-203ENST00000426246 TRAV25A0A0B4J276 109 aa9.35□□□□□ -0.91
USP42-203ENST00000426246 SMCR5Q8TEV8 140 aa9.35□□□□□ -0.91
USP42-203ENST00000426246 IGLV5-39A0A0G2JS06 123 aa9.35□□□□□ -0.91
USP42-203ENST00000426246 HIGD2BQ4VC39 106 aa9.34□□□□□ -0.91
USP42-203ENST00000426246 ANK2Q01484 3957 aa9.34□□□□□ -0.91
USP42-203ENST00000426246 IGKV2-28A0A075B6P5 120 aa9.33□□□□□ -0.92
USP42-203ENST00000426246 IGKV2D-28P01615 120 aa9.33□□□□□ -0.92
USP42-203ENST00000426246 IGLV1-51P01701 117 aa9.33□□□□□ -0.92
USP42-203ENST00000426246 RPL18AQ02543 176 aaKnown RBP9.33□□□□□ -0.92
USP42-203ENST00000426246 CXCL5P42830 114 aa9.32□□□□□ -0.92
USP42-203ENST00000426246 HAMPP81172 84 aa9.32□□□□□ -0.92
USP42-203ENST00000426246 CYSRT1A8MQ03 144 aa9.32□□□□□ -0.92
USP42-203ENST00000426246 C19orf73Q9NVV2 129 aa9.32□□□□□ -0.92
USP42-203ENST00000426246 C6orf99Q4VX62 202 aa9.31□□□□□ -0.92
USP42-203ENST00000426246 CHCHD10Q8WYQ3 142 aaPredicted RBP9.31□□□□□ -0.92
USP42-203ENST00000426246 TRBV6-4A0A1B0GX49 114 aa9.31□□□□□ -0.92
USP42-203ENST00000426246 SCXQ7RTU7 201 aa9.31□□□□□ -0.92
USP42-203ENST00000426246 IGHV3OR16-9A0A0B4J2B5 98 aa9.3□□□□□ -0.92
USP42-203ENST00000426246 A0A1B0GX51 115 aa9.3□□□□□ -0.92
USP42-203ENST00000426246 TRAV23DV6A0A075B6W5 121 aa9.3□□□□□ -0.92
USP42-203ENST00000426246 INAFM2P0DMQ5 153 aa9.3□□□□□ -0.92
USP42-203ENST00000426246 UNQ6190/PRO20217Q6UXQ8 127 aa9.3□□□□□ -0.92
USP42-203ENST00000426246 TIMM17BO60830 172 aa9.3□□□□□ -0.92
USP42-203ENST00000426246 REG3AQ06141 175 aa9.29□□□□□ -0.92
USP42-203ENST00000426246 PRO0255Q9UI72 69 aa9.29□□□□□ -0.92
USP42-203ENST00000426246 hADV29S1A0JD25 119 aa9.29□□□□□ -0.92
USP42-203ENST00000426246 PLAC8L1A1L4L8 177 aa9.29□□□□□ -0.92
USP42-203ENST00000426246 IGLV5-45A0A087WSX0 123 aa9.28□□□□□ -0.92
USP42-203ENST00000426246 RETNQ9HD89 108 aa9.28□□□□□ -0.92
USP42-203ENST00000426246 LINC00846Q9NV44 126 aa9.28□□□□□ -0.92
USP42-203ENST00000426246 ORMDL1Q9P0S3 153 aa9.28□□□□□ -0.92
USP42-203ENST00000426246 SHISA2Q6UWI4 295 aa9.27□□□□□ -0.93
USP42-203ENST00000426246 DNAH3Q8TD57 4116 aa9.27□□□□□ -0.93
USP42-203ENST00000426246 PRB2P02812 416 aaPredicted RBP9.26□□□□□ -0.93
USP42-203ENST00000426246 CELA1Q9UNI1 258 aa9.26□□□□□ -0.93
USP42-203ENST00000426246 C10orf25Q5T742 122 aa9.26□□□□□ -0.93
USP42-203ENST00000426246 IGHV4-28A0A0C4DH34 117 aa9.26□□□□□ -0.93
USP42-203ENST00000426246 TRACP01848 142 aa9.26□□□□□ -0.93
USP42-203ENST00000426246 SPAG11BQ08648 103 aa9.26□□□□□ -0.93
USP42-203ENST00000426246 LINC00643Q86TS7 51 aa9.26□□□□□ -0.93
USP42-203ENST00000426246 DEFB105AQ8NG35 78 aa9.26□□□□□ -0.93
USP42-203ENST00000426246 TENM3Q9P273 2699 aa9.26□□□□□ -0.93
USP42-203ENST00000426246 A0A087WZ39 114 aa9.25□□□□□ -0.93
USP42-203ENST00000426246 LOC107984640A0A0U1RRK4 108 aa9.25□□□□□ -0.93
USP42-203ENST00000426246 IBA57-AS1B1ANH7 110 aa9.24□□□□□ -0.93
USP42-203ENST00000426246 OXLD1Q5BKU9 147 aa9.24□□□□□ -0.93
USP42-203ENST00000426246 ENHOQ6UWT2 76 aa9.23□□□□□ -0.93
USP42-203ENST00000426246 CSDC2Q9Y534 153 aaKnown RBP9.23□□□□□ -0.93
USP42-203ENST00000426246 RPL28P46779 137 aaKnown RBP9.22□□□□□ -0.93
USP42-203ENST00000426246 IL17DQ8TAD2 202 aa9.22□□□□□ -0.93
USP42-203ENST00000426246 H0YGX0 51 aa9.21□□□□□ -0.93
USP42-203ENST00000426246 FAM19A1Q7Z5A9 133 aa9.21□□□□□ -0.93
USP42-203ENST00000426246 MRAPQ8TCY5 172 aa9.21□□□□□ -0.93
USP42-203ENST00000426246 CMC4P56277 68 aaPredicted RBP9.21□□□□□ -0.94
USP42-203ENST00000426246 CSNK1G2-AS1Q8NCQ2 148 aa9.21□□□□□ -0.94
USP42-203ENST00000426246 ZNF561-AS1K7EIQ3 104 aa9.2□□□□□ -0.94
USP42-203ENST00000426246 Q6ZQY7 126 aa9.19□□□□□ -0.94
USP42-203ENST00000426246 ACYP1P07311 99 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms