RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 TRAV8-4A0A0B4J246 113 aa8.01□□□□□ -1.13
UBR4-207ENST00000425413 LYRM9A8MSI8 78 aa8.01□□□□□ -1.13
UBR4-207ENST00000425413 ANGP03950 147 aaKnown RBP8.01□□□□□ -1.13
UBR4-207ENST00000425413 C6orf226Q5I0X4 101 aa8.01□□□□□ -1.13
UBR4-207ENST00000425413 HERV-K104P63124 156 aa8□□□□□ -1.13
UBR4-207ENST00000425413 Q8NAQ8 132 aa8□□□□□ -1.13
UBR4-207ENST00000425413 COL6A5A8TX70 2615 aa7.99□□□□□ -1.13
UBR4-207ENST00000425413 A0A087WZ39 114 aa7.99□□□□□ -1.13
UBR4-207ENST00000425413 SS18Q15532 418 aa7.99□□□□□ -1.13
UBR4-207ENST00000425413 ATP5G1P05496 136 aa7.99□□□□□ -1.13
UBR4-207ENST00000425413 LST1O00453 97 aa7.98□□□□□ -1.13
UBR4-207ENST00000425413 TENM3Q9P273 2699 aa7.98□□□□□ -1.13
UBR4-207ENST00000425413 SNCGO76070 127 aa7.98□□□□□ -1.13
UBR4-207ENST00000425413 SND1-IT1Q9HBX3 110 aa7.98□□□□□ -1.13
UBR4-207ENST00000425413 M0QXV9 152 aa7.97□□□□□ -1.13
UBR4-207ENST00000425413 SPART-AS1P0CW21 52 aa7.97□□□□□ -1.13
UBR4-207ENST00000425413 LINC00526Q96FQ7 95 aa7.97□□□□□ -1.13
UBR4-207ENST00000425413 RNF183Q96D59 192 aa7.96□□□□□ -1.13
UBR4-207ENST00000425413 CCL18P55774 89 aa7.96□□□□□ -1.14
UBR4-207ENST00000425413 LINC00337Q8N6G1 96 aa7.96□□□□□ -1.14
UBR4-207ENST00000425413 WFDC9Q8NEX5 89 aa7.96□□□□□ -1.14
UBR4-207ENST00000425413 H3BT86 120 aa7.95□□□□□ -1.14
UBR4-207ENST00000425413 MIFP14174 115 aa7.95□□□□□ -1.14
UBR4-207ENST00000425413 TTC32Q5I0X7 151 aa7.95□□□□□ -1.14
UBR4-207ENST00000425413 C15orf53Q8NAA6 179 aa7.95□□□□□ -1.14
UBR4-207ENST00000425413 CHCHD10Q8WYQ3 142 aaPredicted RBP7.95□□□□□ -1.14
UBR4-207ENST00000425413 A0A1B0GUV1 79 aa7.95□□□□□ -1.14
UBR4-207ENST00000425413 CRPP02741 224 aa7.95□□□□□ -1.14
UBR4-207ENST00000425413 REG3AQ06141 175 aa7.95□□□□□ -1.14
UBR4-207ENST00000425413 GAGE2BQ13066 116 aa7.95□□□□□ -1.14
UBR4-207ENST00000425413 GAGE2EQ4V326 116 aa7.95□□□□□ -1.14
UBR4-207ENST00000425413 OR13C6PQ8NH95 151 aa7.95□□□□□ -1.14
UBR4-207ENST00000425413 COPS9Q8WXC6 57 aa7.95□□□□□ -1.14
UBR4-207ENST00000425413 ANAPC13Q9BS18 74 aa7.95□□□□□ -1.14
UBR4-207ENST00000425413 GAGE2DQ9UEU5 116 aa7.95□□□□□ -1.14
UBR4-207ENST00000425413 KRTAP10-11P60412 298 aa7.95□□□□□ -1.14
UBR4-207ENST00000425413 C9orf116Q5BN46 136 aaPredicted RBP7.95□□□□□ -1.14
UBR4-207ENST00000425413 IGKV2-28A0A075B6P5 120 aa7.94□□□□□ -1.14
UBR4-207ENST00000425413 IGKV2D-28P01615 120 aa7.94□□□□□ -1.14
UBR4-207ENST00000425413 MALP21145 153 aa7.94□□□□□ -1.14
UBR4-207ENST00000425413 KRTAP24-1Q3LI83 254 aa7.94□□□□□ -1.14
UBR4-207ENST00000425413 COX7A2LO14548 114 aa7.93□□□□□ -1.14
UBR4-207ENST00000425413 PRR3P79522 188 aaKnown RBP7.93□□□□□ -1.14
UBR4-207ENST00000425413 FAM218AQ96MZ4 157 aa7.93□□□□□ -1.14
UBR4-207ENST00000425413 KLK12Q9UKR0 248 aa7.93□□□□□ -1.14
UBR4-207ENST00000425413 Q9HAA7 133 aa7.93□□□□□ -1.14
UBR4-207ENST00000425413 MRPL23Q16540 153 aaKnown RBP7.92□□□□□ -1.14
UBR4-207ENST00000425413 SHISA2Q6UWI4 295 aa7.92□□□□□ -1.14
UBR4-207ENST00000425413 IBA57-AS1B1ANH7 110 aa7.92□□□□□ -1.14
UBR4-207ENST00000425413 C3orf56Q8N813 242 aa7.92□□□□□ -1.14
UBR4-207ENST00000425413 NBEAL1Q6ZS30 2694 aa7.91□□□□□ -1.14
UBR4-207ENST00000425413 PRB2P02812 416 aaPredicted RBP7.91□□□□□ -1.14
UBR4-207ENST00000425413 CFAP161Q6P656 301 aa7.91□□□□□ -1.14
UBR4-207ENST00000425413 C6orf223Q8N319 242 aa7.91□□□□□ -1.14
UBR4-207ENST00000425413 TRAV13-2A0A0B4J235 113 aa7.9□□□□□ -1.14
UBR4-207ENST00000425413 CD164L2Q6UWJ8 174 aa7.9□□□□□ -1.14
UBR4-207ENST00000425413 SMIM11BQ8TCY0 68 aa7.9□□□□□ -1.14
UBR4-207ENST00000425413 BAALC-AS2P0C853 105 aa7.9□□□□□ -1.15
UBR4-207ENST00000425413 Q6ZTC4 211 aa7.89□□□□□ -1.15
UBR4-207ENST00000425413 Q8IZM0 81 aa7.89□□□□□ -1.15
UBR4-207ENST00000425413 LINC01600Q96MT4 127 aa7.88□□□□□ -1.15
UBR4-207ENST00000425413 ANK2Q01484 3957 aa7.88□□□□□ -1.15
UBR4-207ENST00000425413 MGAM2Q2M2H8 2515 aa7.88□□□□□ -1.15
UBR4-207ENST00000425413 KIAA0087Q14695 138 aa7.88□□□□□ -1.15
UBR4-207ENST00000425413 C10orf25Q5T742 122 aa7.88□□□□□ -1.15
UBR4-207ENST00000425413 A0A087WYN8 130 aa7.87□□□□□ -1.15
UBR4-207ENST00000425413 LELP1Q5T871 98 aa7.87□□□□□ -1.15
UBR4-207ENST00000425413 NDUFV3P56181 108 aaKnown RBP7.87□□□□□ -1.15
UBR4-207ENST00000425413 UNQ6190/PRO20217Q6UXQ8 127 aa7.87□□□□□ -1.15
UBR4-207ENST00000425413 LYPD5Q6UWN5 251 aa7.86□□□□□ -1.15
UBR4-207ENST00000425413 WFDC10BQ8IUB3 73 aa7.86□□□□□ -1.15
UBR4-207ENST00000425413 KPRPQ5T749 579 aaPredicted RBP7.86□□□□□ -1.15
UBR4-207ENST00000425413 WIPF1O43516 503 aa7.86□□□□□ -1.15
UBR4-207ENST00000425413 RPL28P46779 137 aaKnown RBP7.86□□□□□ -1.15
UBR4-207ENST00000425413 SPAG11BQ08648 103 aa7.86□□□□□ -1.15
UBR4-207ENST00000425413 SLPIP03973 132 aa7.85□□□□□ -1.15
UBR4-207ENST00000425413 NANOS2P60321 138 aaKnown RBP7.85□□□□□ -1.15
UBR4-207ENST00000425413 NCR3O14931 201 aa7.85□□□□□ -1.15
UBR4-207ENST00000425413 DNAL4O96015 105 aa7.85□□□□□ -1.15
UBR4-207ENST00000425413 TRACP01848 142 aa7.85□□□□□ -1.15
UBR4-207ENST00000425413 ENHOQ6UWT2 76 aa7.85□□□□□ -1.15
UBR4-207ENST00000425413 A0A0J9YWU9 116 aa7.84□□□□□ -1.15
UBR4-207ENST00000425413 NHLRC4P0CG21 123 aaPredicted RBP7.84□□□□□ -1.15
UBR4-207ENST00000425413 BAHCC1Q9P281 2608 aa7.84□□□□□ -1.15
UBR4-207ENST00000425413 B5MCH6 92 aa7.84□□□□□ -1.15
UBR4-207ENST00000425413 LECT2O14960 151 aa7.84□□□□□ -1.15
UBR4-207ENST00000425413 DEFB121Q5J5C9 76 aa7.83□□□□□ -1.16
UBR4-207ENST00000425413 GAGE2AQ6NT46 116 aa7.83□□□□□ -1.16
UBR4-207ENST00000425413 CYSRT1A8MQ03 144 aa7.83□□□□□ -1.16
UBR4-207ENST00000425413 HIGD2BQ4VC39 106 aa7.83□□□□□ -1.16
UBR4-207ENST00000425413 Q8NDZ9 215 aa7.83□□□□□ -1.16
UBR4-207ENST00000425413 CCDC179H3BU77 68 aa7.82□□□□□ -1.16
UBR4-207ENST00000425413 MRAPQ8TCY5 172 aa7.82□□□□□ -1.16
UBR4-207ENST00000425413 FAM240AA0A1B0GVK7 77 aa7.81□□□□□ -1.16
UBR4-207ENST00000425413 SS18L2Q9UHA2 77 aa7.81□□□□□ -1.16
UBR4-207ENST00000425413 C9orf129Q5T035 196 aaKnown RBP7.81□□□□□ -1.16
UBR4-207ENST00000425413 C22orf24Q9Y442 160 aa7.81□□□□□ -1.16
UBR4-207ENST00000425413 SMCR5Q8TEV8 140 aa7.8□□□□□ -1.16
UBR4-207ENST00000425413 XAGE1AQ9HD64 81 aa7.8□□□□□ -1.16
UBR4-207ENST00000425413 ESRGQ1W209 222 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 158.1 ms