RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 PRO0461Q9UI25 63 aa8.79□□□□□ -1
CLCN4-203ENST00000421085 LINC01546A6NGU7 62 aa8.78□□□□□ -1
CLCN4-203ENST00000421085 A0A087WSZ3 146 aa8.78□□□□□ -1
CLCN4-203ENST00000421085 HCG22E2RYF7 251 aa8.78□□□□□ -1
CLCN4-203ENST00000421085 AVPP01185 164 aa8.78□□□□□ -1
CLCN4-203ENST00000421085 LINC00474Q9P2X8 69 aa8.77□□□□□ -1.01
CLCN4-203ENST00000421085 RETNLBQ9BQ08 111 aa8.77□□□□□ -1.01
CLCN4-203ENST00000421085 Q9BRP9 147 aa8.77□□□□□ -1.01
CLCN4-203ENST00000421085 Q9UF83 564 aa8.76□□□□□ -1.01
CLCN4-203ENST00000421085 PTPN13Q12923 2485 aa8.76□□□□□ -1.01
CLCN4-203ENST00000421085 MUC22E2RYF6 1773 aaPredicted RBP8.76□□□□□ -1.01
CLCN4-203ENST00000421085 hDV103S1A0JD37 113 aa8.75□□□□□ -1.01
CLCN4-203ENST00000421085 CDSNQ15517 529 aa8.74□□□□□ -1.01
CLCN4-203ENST00000421085 Q8N2B8 174 aa8.74□□□□□ -1.01
CLCN4-203ENST00000421085 RPS28P62857 69 aaKnown RBP8.74□□□□□ -1.01
CLCN4-203ENST00000421085 SMIM29Q86T20 159 aa8.74□□□□□ -1.01
CLCN4-203ENST00000421085 CIRBP-AS1Q8TBR5 109 aa8.74□□□□□ -1.01
CLCN4-203ENST00000421085 KIF25-AS1Q9Y6Z4 181 aa8.74□□□□□ -1.01
CLCN4-203ENST00000421085 ACACBO00763 2458 aa8.73□□□□□ -1.01
CLCN4-203ENST00000421085 A0A1B0GUV1 79 aa8.73□□□□□ -1.01
CLCN4-203ENST00000421085 SPINK1P00995 79 aa8.72□□□□□ -1.01
CLCN4-203ENST00000421085 BDP1A6H8Y1 2624 aa8.72□□□□□ -1.01
CLCN4-203ENST00000421085 LIMD2Q9BT23 127 aa8.72□□□□□ -1.01
CLCN4-203ENST00000421085 C1orf64Q8NEQ6 169 aa8.72□□□□□ -1.01
CLCN4-203ENST00000421085 IGLV5-39A0A0G2JS06 123 aa8.71□□□□□ -1.01
CLCN4-203ENST00000421085 SPATA3Q8NHX4 192 aa8.71□□□□□ -1.01
CLCN4-203ENST00000421085 LY6G6DO95868 133 aa8.71□□□□□ -1.01
CLCN4-203ENST00000421085 PRRC2AP48634 2157 aaKnown RBP8.71□□□□□ -1.02
CLCN4-203ENST00000421085 COL5A1P20908 1838 aaPredicted RBP8.71□□□□□ -1.02
CLCN4-203ENST00000421085 SBSPONQ8IVN8 264 aa8.71□□□□□ -1.02
CLCN4-203ENST00000421085 FAM218AQ96MZ4 157 aa8.71□□□□□ -1.02
CLCN4-203ENST00000421085 CEP192Q8TEP8 1941 aa8.7□□□□□ -1.02
CLCN4-203ENST00000421085 LINC01561Q8N1V8 128 aa8.7□□□□□ -1.02
CLCN4-203ENST00000421085 IGLV1-51P01701 117 aa8.7□□□□□ -1.02
CLCN4-203ENST00000421085 PTPRSQ13332 1948 aa8.7□□□□□ -1.02
CLCN4-203ENST00000421085 SONP18583 2426 aaKnown RBP8.7□□□□□ -1.02
CLCN4-203ENST00000421085 MUC6Q6W4X9 2439 aa8.69□□□□□ -1.02
CLCN4-203ENST00000421085 X6R8D5 127 aa8.69□□□□□ -1.02
CLCN4-203ENST00000421085 CPAMD8Q8IZJ3 1885 aa8.69□□□□□ -1.02
CLCN4-203ENST00000421085 AGRNO00468 2067 aa8.68□□□□□ -1.02
CLCN4-203ENST00000421085 BRI3O95415 125 aa8.68□□□□□ -1.02
CLCN4-203ENST00000421085 SRCAPQ6ZRS2 3230 aa8.68□□□□□ -1.02
CLCN4-203ENST00000421085 PLA2G2AP14555 144 aa8.68□□□□□ -1.02
CLCN4-203ENST00000421085 OXLD1Q5BKU9 147 aa8.68□□□□□ -1.02
CLCN4-203ENST00000421085 Q6ZRU5 148 aa8.68□□□□□ -1.02
CLCN4-203ENST00000421085 C2orf48Q96LS8 159 aa8.68□□□□□ -1.02
CLCN4-203ENST00000421085 OTOGLQ3ZCN5 2332 aa8.67□□□□□ -1.02
CLCN4-203ENST00000421085 KIAA0087Q14695 138 aa8.67□□□□□ -1.02
CLCN4-203ENST00000421085 BCE1O60756 84 aa8.66□□□□□ -1.02
CLCN4-203ENST00000421085 LINC00315P59091 139 aa8.66□□□□□ -1.02
CLCN4-203ENST00000421085 Q6ZTC4 211 aa8.66□□□□□ -1.02
CLCN4-203ENST00000421085 F8WDY8 70 aa8.65□□□□□ -1.02
CLCN4-203ENST00000421085 LRP4O75096 1905 aa8.65□□□□□ -1.02
CLCN4-203ENST00000421085 RAI1Q7Z5J4 1906 aaPredicted RBP8.65□□□□□ -1.02
CLCN4-203ENST00000421085 PRLHP81277 87 aa8.65□□□□□ -1.02
CLCN4-203ENST00000421085 LYPD5Q6UWN5 251 aa8.64□□□□□ -1.03
CLCN4-203ENST00000421085 NOTCH2Q04721 2471 aa8.64□□□□□ -1.03
CLCN4-203ENST00000421085 EXPH5Q8NEV8 1989 aa8.64□□□□□ -1.03
CLCN4-203ENST00000421085 C10orf142B7Z368 130 aa8.64□□□□□ -1.03
CLCN4-203ENST00000421085 LINC01556Q5JQF7 62 aa8.64□□□□□ -1.03
CLCN4-203ENST00000421085 IGHV3OR16-9A0A0B4J2B5 98 aa8.63□□□□□ -1.03
CLCN4-203ENST00000421085 HIVEP3Q5T1R4 2406 aa8.63□□□□□ -1.03
CLCN4-203ENST00000421085 LY6G6CO95867 125 aa8.62□□□□□ -1.03
CLCN4-203ENST00000421085 C11orf72Q8NBR9 251 aa8.62□□□□□ -1.03
CLCN4-203ENST00000421085 SERTAD4-AS1Q5TG53 156 aa8.62□□□□□ -1.03
CLCN4-203ENST00000421085 CACNA1AO00555 2505 aa8.62□□□□□ -1.03
CLCN4-203ENST00000421085 CUL9Q8IWT3 2517 aa8.61□□□□□ -1.03
CLCN4-203ENST00000421085 Q6ZQT0 140 aa8.61□□□□□ -1.03
CLCN4-203ENST00000421085 A0A1B0GU69 56 aa8.61□□□□□ -1.03
CLCN4-203ENST00000421085 SMCR5Q8TEV8 140 aa8.61□□□□□ -1.03
CLCN4-203ENST00000421085 C22orf24Q9Y442 160 aa8.61□□□□□ -1.03
CLCN4-203ENST00000421085 SPAG11AQ6PDA7 123 aa8.61□□□□□ -1.03
CLCN4-203ENST00000421085 TM2D3Q9BRN9 247 aa8.6□□□□□ -1.03
CLCN4-203ENST00000421085 FAM19A4Q96LR4 140 aa8.6□□□□□ -1.03
CLCN4-203ENST00000421085 IGLV5-45A0A087WSX0 123 aa8.6□□□□□ -1.03
CLCN4-203ENST00000421085 TET2Q6N021 2002 aaPredicted RBP8.59□□□□□ -1.03
CLCN4-203ENST00000421085 TTC28Q96AY4 2481 aa8.59□□□□□ -1.03
CLCN4-203ENST00000421085 A0A1W2PPR1 153 aa8.58□□□□□ -1.04
CLCN4-203ENST00000421085 ADAMTS20P59510 1910 aa8.58□□□□□ -1.04
CLCN4-203ENST00000421085 LOC110117498A0A087WWA1 95 aa8.57□□□□□ -1.04
CLCN4-203ENST00000421085 SMR3AQ99954 134 aa8.57□□□□□ -1.04
CLCN4-203ENST00000421085 IGLV5-52A0A0A0MRZ9 124 aa8.56□□□□□ -1.04
CLCN4-203ENST00000421085 IGKV2D-30A0A075B6S6 120 aa8.56□□□□□ -1.04
CLCN4-203ENST00000421085 IGKV2-30P06310 120 aa8.56□□□□□ -1.04
CLCN4-203ENST00000421085 C7orf65Q6ZTY9 151 aa8.55□□□□□ -1.04
CLCN4-203ENST00000421085 ELOF1P60002 83 aaKnown RBP8.55□□□□□ -1.04
CLCN4-203ENST00000421085 C6orf48Q9UBA6 75 aa8.55□□□□□ -1.04
CLCN4-203ENST00000421085 FSHBP01225 129 aa8.55□□□□□ -1.04
CLCN4-203ENST00000421085 ACYP2P14621 99 aa8.55□□□□□ -1.04
CLCN4-203ENST00000421085 KRTAP10-9P60411 292 aa8.54□□□□□ -1.04
CLCN4-203ENST00000421085 TP53AIP1Q9HCN2 124 aa8.54□□□□□ -1.04
CLCN4-203ENST00000421085 NAV2Q8IVL1 2488 aa8.54□□□□□ -1.04
CLCN4-203ENST00000421085 C16orf95Q9H693 158 aa8.53□□□□□ -1.04
CLCN4-203ENST00000421085 LINC00167Q96N53 147 aa8.53□□□□□ -1.04
CLCN4-203ENST00000421085 MYO18BQ8IUG5 2567 aa8.52□□□□□ -1.05
CLCN4-203ENST00000421085 FHL3Q13643 280 aa8.52□□□□□ -1.05
CLCN4-203ENST00000421085 NUPR2A6NF83 97 aa8.51□□□□□ -1.05
CLCN4-203ENST00000421085 LITAFQ99732 161 aa8.51□□□□□ -1.05
CLCN4-203ENST00000421085 A0A1B0GW54 56 aa8.51□□□□□ -1.05
CLCN4-203ENST00000421085 H3BPC8 53 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms