RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 DNAH12Q6ZR08 3092 aa10.34□□□□□ -0.75
AP000550.1-201ENST00000420508 Q6ZTC4 211 aa10.34□□□□□ -0.75
AP000550.1-201ENST00000420508 LINC00337Q8N6G1 96 aa10.34□□□□□ -0.75
AP000550.1-201ENST00000420508 LINC00526Q96FQ7 95 aa10.34□□□□□ -0.75
AP000550.1-201ENST00000420508 TRBV7-7A0A0K0K1E9 115 aa10.34□□□□□ -0.75
AP000550.1-201ENST00000420508 TRBV7-6A0A0J9YX20 115 aa10.33□□□□□ -0.76
AP000550.1-201ENST00000420508 X6R8D5 127 aa10.33□□□□□ -0.76
AP000550.1-201ENST00000420508 IGKV2-28A0A075B6P5 120 aa10.33□□□□□ -0.76
AP000550.1-201ENST00000420508 IGKV2D-28P01615 120 aa10.33□□□□□ -0.76
AP000550.1-201ENST00000420508 C2CD3Q4AC94 2353 aa10.33□□□□□ -0.76
AP000550.1-201ENST00000420508 C4orf48Q5BLP8 95 aa10.32□□□□□ -0.76
AP000550.1-201ENST00000420508 LINC01556Q5JQF7 62 aa10.32□□□□□ -0.76
AP000550.1-201ENST00000420508 H0Y9J4 135 aa10.31□□□□□ -0.76
AP000550.1-201ENST00000420508 TRAV7A0A075B6U4 112 aa10.31□□□□□ -0.76
AP000550.1-201ENST00000420508 WFDC9Q8NEX5 89 aa10.3□□□□□ -0.76
AP000550.1-201ENST00000420508 USP9XQ93008 2570 aaPredicted RBP10.3□□□□□ -0.76
AP000550.1-201ENST00000420508 C9orf116Q5BN46 136 aaPredicted RBP10.3□□□□□ -0.76
AP000550.1-201ENST00000420508 CDIP1Q9H305 208 aa10.3□□□□□ -0.76
AP000550.1-201ENST00000420508 A0A1B0GW54 56 aa10.3□□□□□ -0.76
AP000550.1-201ENST00000420508 SONP18583 2426 aaKnown RBP10.28□□□□□ -0.76
AP000550.1-201ENST00000420508 SMCPP49901 116 aaPredicted RBP10.28□□□□□ -0.76
AP000550.1-201ENST00000420508 C7orf33Q8WU49 177 aa10.28□□□□□ -0.76
AP000550.1-201ENST00000420508 REG3GQ6UW15 175 aa10.27□□□□□ -0.76
AP000550.1-201ENST00000420508 RETNQ9HD89 108 aa10.27□□□□□ -0.77
AP000550.1-201ENST00000420508 BCE1O60756 84 aa10.27□□□□□ -0.77
AP000550.1-201ENST00000420508 WFDC10BQ8IUB3 73 aa10.26□□□□□ -0.77
AP000550.1-201ENST00000420508 LITAFQ99732 161 aa10.26□□□□□ -0.77
AP000550.1-201ENST00000420508 CCDC179H3BU77 68 aa10.25□□□□□ -0.77
AP000550.1-201ENST00000420508 GVQW2A0A096LPI5 108 aaPredicted RBP10.25□□□□□ -0.77
AP000550.1-201ENST00000420508 MYO18BQ8IUG5 2567 aa10.24□□□□□ -0.77
AP000550.1-201ENST00000420508 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.24□□□□□ -0.77
AP000550.1-201ENST00000420508 C3orf84H3BNL1 204 aa10.24□□□□□ -0.77
AP000550.1-201ENST00000420508 SCXQ7RTU7 201 aa10.24□□□□□ -0.77
AP000550.1-201ENST00000420508 NHLRC4P0CG21 123 aaPredicted RBP10.24□□□□□ -0.77
AP000550.1-201ENST00000420508 CXCL6P80162 114 aa10.24□□□□□ -0.77
AP000550.1-201ENST00000420508 CELA1Q9UNI1 258 aa10.24□□□□□ -0.77
AP000550.1-201ENST00000420508 USP9YO00507 2555 aaPredicted RBP10.24□□□□□ -0.77
AP000550.1-201ENST00000420508 BPTFQ12830 3046 aa10.24□□□□□ -0.77
AP000550.1-201ENST00000420508 C1orf137Q5JT78 98 aa10.23□□□□□ -0.77
AP000550.1-201ENST00000420508 PLAC8L1A1L4L8 177 aa10.23□□□□□ -0.77
AP000550.1-201ENST00000420508 C6orf223Q8N319 242 aa10.23□□□□□ -0.77
AP000550.1-201ENST00000420508 PRR3P79522 188 aaKnown RBP10.22□□□□□ -0.77
AP000550.1-201ENST00000420508 V9GYY9 64 aa10.22□□□□□ -0.77
AP000550.1-201ENST00000420508 RPL37AP8A6NKH3 93 aa10.22□□□□□ -0.77
AP000550.1-201ENST00000420508 SOSTDC1Q6X4U4 206 aa10.22□□□□□ -0.77
AP000550.1-201ENST00000420508 Q6ZRU5 148 aa10.22□□□□□ -0.77
AP000550.1-201ENST00000420508 CSNK1G2-AS1Q8NCQ2 148 aa10.22□□□□□ -0.77
AP000550.1-201ENST00000420508 MRPL55Q7Z7F7 128 aaKnown RBP10.22□□□□□ -0.77
AP000550.1-201ENST00000420508 Q8NAQ8 132 aa10.22□□□□□ -0.77
AP000550.1-201ENST00000420508 C10orf25Q5T742 122 aa10.21□□□□□ -0.77
AP000550.1-201ENST00000420508 CHKB-CPT1BH3BT56 60 aa10.21□□□□□ -0.78
AP000550.1-201ENST00000420508 SPTBN4Q9H254 2564 aa10.2□□□□□ -0.78
AP000550.1-201ENST00000420508 LINC00612Q8N6U2 182 aa10.19□□□□□ -0.78
AP000550.1-201ENST00000420508 ABCA12Q86UK0 2595 aa10.19□□□□□ -0.78
AP000550.1-201ENST00000420508 ZNF462Q96JM2 2506 aa10.18□□□□□ -0.78
AP000550.1-201ENST00000420508 Q9UF83 564 aa10.18□□□□□ -0.78
AP000550.1-201ENST00000420508 LINC00846Q9NV44 126 aa10.18□□□□□ -0.78
AP000550.1-201ENST00000420508 CHD9Q3L8U1 2897 aa10.17□□□□□ -0.78
AP000550.1-201ENST00000420508 MUC4Q99102 2169 aa10.17□□□□□ -0.78
AP000550.1-201ENST00000420508 ANKRD17O75179 2603 aaKnown RBP10.17□□□□□ -0.78
AP000550.1-201ENST00000420508 Q6ZVQ6 151 aa10.17□□□□□ -0.78
AP000550.1-201ENST00000420508 LOC110117498A0A087WWA1 95 aa10.16□□□□□ -0.78
AP000550.1-201ENST00000420508 CHD7Q9P2D1 2997 aa10.16□□□□□ -0.78
AP000550.1-201ENST00000420508 C6orf48Q9UBA6 75 aa10.16□□□□□ -0.78
AP000550.1-201ENST00000420508 CHD8Q9HCK8 2581 aa10.15□□□□□ -0.78
AP000550.1-201ENST00000420508 ELOF1P60002 83 aaKnown RBP10.15□□□□□ -0.79
AP000550.1-201ENST00000420508 PKD1L2Q7Z442 2459 aa10.15□□□□□ -0.79
AP000550.1-201ENST00000420508 ABCA2Q9BZC7 2435 aa10.15□□□□□ -0.79
AP000550.1-201ENST00000420508 ESRGQ1W209 222 aa10.14□□□□□ -0.79
AP000550.1-201ENST00000420508 IGKV4-1P06312 121 aa10.13□□□□□ -0.79
AP000550.1-201ENST00000420508 C19orf73Q9NVV2 129 aa10.13□□□□□ -0.79
AP000550.1-201ENST00000420508 SERP1Q9Y6X1 66 aa10.13□□□□□ -0.79
AP000550.1-201ENST00000420508 TLN2Q9Y4G6 2542 aa10.12□□□□□ -0.79
AP000550.1-201ENST00000420508 LINC01547P58512 204 aaPredicted RBP10.12□□□□□ -0.79
AP000550.1-201ENST00000420508 Q8N3U1 123 aa10.12□□□□□ -0.79
AP000550.1-201ENST00000420508 FAM218AQ96MZ4 157 aa10.12□□□□□ -0.79
AP000550.1-201ENST00000420508 TRANK1O15050 2925 aa10.11□□□□□ -0.79
AP000550.1-201ENST00000420508 SMIM26A0A096LP01 95 aa10.1□□□□□ -0.79
AP000550.1-201ENST00000420508 C22orf24Q9Y442 160 aa10.1□□□□□ -0.79
AP000550.1-201ENST00000420508 C5orf47Q569G3 176 aa10.1□□□□□ -0.79
AP000550.1-201ENST00000420508 A0A087WVE0 104 aa10.09□□□□□ -0.79
AP000550.1-201ENST00000420508 A0A096LNI7 61 aa10.09□□□□□ -0.79
AP000550.1-201ENST00000420508 LRRK2Q5S007 2527 aa10.09□□□□□ -0.79
AP000550.1-201ENST00000420508 Q9BRP9 147 aa10.08□□□□□ -0.8
AP000550.1-201ENST00000420508 GIG44P09565 113 aaPredicted RBP10.08□□□□□ -0.8
AP000550.1-201ENST00000420508 DNAH10OSP0CZ25 163 aa10.08□□□□□ -0.8
AP000550.1-201ENST00000420508 SNURFQ9Y675 71 aa10.08□□□□□ -0.8
AP000550.1-201ENST00000420508 HTTP42858 3142 aa10.07□□□□□ -0.8
AP000550.1-201ENST00000420508 PRB2P02812 416 aaPredicted RBP10.07□□□□□ -0.8
AP000550.1-201ENST00000420508 IGLV6-57P01721 117 aa10.07□□□□□ -0.8
AP000550.1-201ENST00000420508 WFDC13Q8IUB5 93 aa10.07□□□□□ -0.8
AP000550.1-201ENST00000420508 ZNF575Q86XF7 245 aa10.07□□□□□ -0.8
AP000550.1-201ENST00000420508 KRTAP1-3Q8IUG1 177 aa10.07□□□□□ -0.8
AP000550.1-201ENST00000420508 SPATA3Q8NHX4 192 aa10.07□□□□□ -0.8
AP000550.1-201ENST00000420508 PRR34Q9NV39 138 aa10.07□□□□□ -0.8
AP000550.1-201ENST00000420508 CRYGAP11844 174 aa10.07□□□□□ -0.8
AP000550.1-201ENST00000420508 CEP350Q5VT06 3117 aa10.06□□□□□ -0.8
AP000550.1-201ENST00000420508 Q6ZQT0 140 aa10.06□□□□□ -0.8
AP000550.1-201ENST00000420508 KRTAP24-1Q3LI83 254 aa10.04□□□□□ -0.8
AP000550.1-201ENST00000420508 LINC01600Q96MT4 127 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms