RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 KIAA1644Q3SXP7 199 aa13.01□□□□□ -0.33
PTPN4-202ENST00000420482 ERASQ7Z444 233 aa13.01□□□□□ -0.33
PTPN4-202ENST00000420482 SCGB3A1Q96QR1 104 aa13.01□□□□□ -0.33
PTPN4-202ENST00000420482 H0Y9J4 135 aa13□□□□□ -0.33
PTPN4-202ENST00000420482 CXCL5P42830 114 aa13□□□□□ -0.33
PTPN4-202ENST00000420482 CDKN2A-AS1Q9UH64 79 aa13□□□□□ -0.33
PTPN4-202ENST00000420482 COX19Q49B96 90 aa12.99□□□□□ -0.33
PTPN4-202ENST00000420482 C9orf129Q5T035 196 aaKnown RBP12.99□□□□□ -0.33
PTPN4-202ENST00000420482 GNB1LQ9BYB4 327 aa12.99□□□□□ -0.33
PTPN4-202ENST00000420482 F8VRH5 84 aa12.98□□□□□ -0.33
PTPN4-202ENST00000420482 ADCYAP1P18509 176 aa12.98□□□□□ -0.33
PTPN4-202ENST00000420482 ODF1Q14990 250 aa12.98□□□□□ -0.33
PTPN4-202ENST00000420482 SEC11CQ9BY50 192 aa12.98□□□□□ -0.33
PTPN4-202ENST00000420482 LINC00469Q8N7U9 141 aa12.97□□□□□ -0.33
PTPN4-202ENST00000420482 LBHQ53QV2 105 aaPredicted RBP12.96□□□□□ -0.33
PTPN4-202ENST00000420482 KRTAP11-1Q8IUC1 163 aa12.95□□□□□ -0.34
PTPN4-202ENST00000420482 KRTAP7-1Q8IUC3 87 aa12.95□□□□□ -0.34
PTPN4-202ENST00000420482 SMCO4Q9NRQ5 59 aa12.94□□□□□ -0.34
PTPN4-202ENST00000420482 IGLV1-50A0A075B6I6 118 aa12.93□□□□□ -0.34
PTPN4-202ENST00000420482 TINCRA0A1B0GVN0 87 aa12.93□□□□□ -0.34
PTPN4-202ENST00000420482 NUPR1O60356 82 aa12.93□□□□□ -0.34
PTPN4-202ENST00000420482 PDZD11Q5EBL8 140 aa12.93□□□□□ -0.34
PTPN4-202ENST00000420482 FA2HQ7L5A8 372 aa12.92□□□□□ -0.34
PTPN4-202ENST00000420482 PRR26Q8N8Z3 221 aa12.92□□□□□ -0.34
PTPN4-202ENST00000420482 XAGE1AQ9HD64 81 aa12.92□□□□□ -0.34
PTPN4-202ENST00000420482 LINC01546A6NGU7 62 aa12.91□□□□□ -0.34
PTPN4-202ENST00000420482 C22orf24Q9Y442 160 aa12.91□□□□□ -0.34
PTPN4-202ENST00000420482 SMIM1B2RUZ4 78 aa12.9□□□□□ -0.34
PTPN4-202ENST00000420482 COX7B2Q8TF08 81 aa12.9□□□□□ -0.34
PTPN4-202ENST00000420482 TP73-AS1Q9UF72 201 aa12.9□□□□□ -0.34
PTPN4-202ENST00000420482 RPL13AP40429 203 aaKnown RBP12.89□□□□□ -0.35
PTPN4-202ENST00000420482 FABP9Q0Z7S8 132 aa12.89□□□□□ -0.35
PTPN4-202ENST00000420482 PMVKQ15126 192 aa12.89□□□□□ -0.35
PTPN4-202ENST00000420482 CST9LQ9H4G1 147 aa12.89□□□□□ -0.35
PTPN4-202ENST00000420482 IGLV5-45A0A087WSX0 123 aa12.88□□□□□ -0.35
PTPN4-202ENST00000420482 H3BRM9 83 aa12.88□□□□□ -0.35
PTPN4-202ENST00000420482 IFITM2Q01629 132 aa12.88□□□□□ -0.35
PTPN4-202ENST00000420482 RHEBQ15382 184 aa12.88□□□□□ -0.35
PTPN4-202ENST00000420482 MRPL18Q9H0U6 180 aaKnown RBP12.88□□□□□ -0.35
PTPN4-202ENST00000420482 ZNF861PO60384 105 aa12.87□□□□□ -0.35
PTPN4-202ENST00000420482 MRPL55Q7Z7F7 128 aaKnown RBP12.87□□□□□ -0.35
PTPN4-202ENST00000420482 COMMD7Q86VX2 200 aa12.87□□□□□ -0.35
PTPN4-202ENST00000420482 RPS10P5Q9NQ39 176 aa12.86□□□□□ -0.35
PTPN4-202ENST00000420482 CARHSP1Q9Y2V2 147 aaKnown RBP12.84□□□□□ -0.35
PTPN4-202ENST00000420482 ATP5LO75964 103 aa12.83□□□□□ -0.36
PTPN4-202ENST00000420482 KRTAP1-4P0C5Y4 121 aa12.83□□□□□ -0.36
PTPN4-202ENST00000420482 SPINK8P0C7L1 97 aa12.83□□□□□ -0.36
PTPN4-202ENST00000420482 RPL28P46779 137 aaKnown RBP12.82□□□□□ -0.36
PTPN4-202ENST00000420482 C10orf91Q5T1B1 145 aa12.81□□□□□ -0.36
PTPN4-202ENST00000420482 NDUFA6P56556 154 aa12.8□□□□□ -0.36
PTPN4-202ENST00000420482 RAB5BP61020 215 aa12.8□□□□□ -0.36
PTPN4-202ENST00000420482 NKAPP1Q8N9T2 125 aa12.8□□□□□ -0.36
PTPN4-202ENST00000420482 BCE1O60756 84 aa12.79□□□□□ -0.36
PTPN4-202ENST00000420482 TRAPPC1Q9Y5R8 145 aa12.79□□□□□ -0.36
PTPN4-202ENST00000420482 LINC00614P0C842 121 aa12.77□□□□□ -0.37
PTPN4-202ENST00000420482 IGLC3P0DOY3 106 aa12.77□□□□□ -0.37
PTPN4-202ENST00000420482 LINC00167Q96N53 147 aa12.77□□□□□ -0.37
PTPN4-202ENST00000420482 HBDP02042 147 aa12.76□□□□□ -0.37
PTPN4-202ENST00000420482 RPL37AP8A6NKH3 93 aa12.75□□□□□ -0.37
PTPN4-202ENST00000420482 IGLV5-37A0A075B6J1 123 aa12.74□□□□□ -0.37
PTPN4-202ENST00000420482 NDUFA5Q16718 116 aa12.74□□□□□ -0.37
PTPN4-202ENST00000420482 SFTA2Q6UW10 78 aa12.74□□□□□ -0.37
PTPN4-202ENST00000420482 C18orf32Q8TCD1 76 aa12.74□□□□□ -0.37
PTPN4-202ENST00000420482 GAGE10A6NGK3 116 aa12.73□□□□□ -0.37
PTPN4-202ENST00000420482 PFN2P35080 140 aa12.73□□□□□ -0.37
PTPN4-202ENST00000420482 IGLV5-39A0A0G2JS06 123 aa12.72□□□□□ -0.37
PTPN4-202ENST00000420482 UBE2AP49459 152 aa12.71□□□□□ -0.37
PTPN4-202ENST00000420482 COX17Q14061 63 aa12.71□□□□□ -0.37
PTPN4-202ENST00000420482 A0A096LNJ9 63 aa12.7□□□□□ -0.38
PTPN4-202ENST00000420482 SNAPINO95295 136 aa12.7□□□□□ -0.38
PTPN4-202ENST00000420482 CRYGAP11844 174 aa12.7□□□□□ -0.38
PTPN4-202ENST00000420482 ZNF22P17026 224 aaPredicted RBP12.7□□□□□ -0.38
PTPN4-202ENST00000420482 LPAP08519 4548 aa12.7□□□□□ -0.38
PTPN4-202ENST00000420482 APOC3P02656 99 aa12.69□□□□□ -0.38
PTPN4-202ENST00000420482 RPL24P83731 157 aaKnown RBP12.69□□□□□ -0.38
PTPN4-202ENST00000420482 BAGE3Q86Y29 109 aa12.69□□□□□ -0.38
PTPN4-202ENST00000420482 SVBPQ8N300 66 aa12.69□□□□□ -0.38
PTPN4-202ENST00000420482 ERG28Q9UKR5 140 aa12.69□□□□□ -0.38
PTPN4-202ENST00000420482 PRR4Q16378 134 aa12.68□□□□□ -0.38
PTPN4-202ENST00000420482 TMEM170BQ5T4T1 132 aa12.68□□□□□ -0.38
PTPN4-202ENST00000420482 PMCHL1Q16048 86 aa12.67□□□□□ -0.38
PTPN4-202ENST00000420482 URB1-AS1Q96HZ7 61 aa12.67□□□□□ -0.38
PTPN4-202ENST00000420482 TYMSOSQ8TAI1 123 aa12.66□□□□□ -0.38
PTPN4-202ENST00000420482 IGKV2-28A0A075B6P5 120 aa12.65□□□□□ -0.38
PTPN4-202ENST00000420482 IGKV2D-28P01615 120 aa12.65□□□□□ -0.38
PTPN4-202ENST00000420482 SND1-IT1Q9HBX3 110 aa12.65□□□□□ -0.38
PTPN4-202ENST00000420482 C11orf86A6NJI1 115 aa12.63□□□□□ -0.39
PTPN4-202ENST00000420482 ZNF625Q96I27 306 aaPredicted RBP12.63□□□□□ -0.39
PTPN4-202ENST00000420482 CHTOPQ9Y3Y2 248 aaKnown RBP12.63□□□□□ -0.39
PTPN4-202ENST00000420482 A0A087X002 238 aa12.62□□□□□ -0.39
PTPN4-202ENST00000420482 VPREB1P12018 145 aa12.61□□□□□ -0.39
PTPN4-202ENST00000420482 CHCHD1Q96BP2 118 aaKnown RBP12.61□□□□□ -0.39
PTPN4-202ENST00000420482 TSPAN13O95857 204 aa12.6□□□□□ -0.39
PTPN4-202ENST00000420482 FAM229BQ4G0N7 80 aa12.6□□□□□ -0.39
PTPN4-202ENST00000420482 KRTAP13-1Q8IUC0 172 aa12.6□□□□□ -0.39
PTPN4-202ENST00000420482 SCO1O75880 301 aa12.59□□□□□ -0.39
PTPN4-202ENST00000420482 FAM19A1Q7Z5A9 133 aa12.59□□□□□ -0.39
PTPN4-202ENST00000420482 TMEM126AQ9H061 195 aa12.59□□□□□ -0.39
PTPN4-202ENST00000420482 LINC00158P58513 81 aa12.58□□□□□ -0.4
PTPN4-202ENST00000420482 TRAV12-1A0A0B4J245 112 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms