RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 SDIM1Q6ZPB5 146 aa6.21□□□□□ -1.42
SYNE1-211ENST00000413186 RNF185Q96GF1 192 aa6.21□□□□□ -1.42
SYNE1-211ENST00000413186 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.21□□□□□ -1.42
SYNE1-211ENST00000413186 IGKV2-29A2NJV5 120 aaPredicted RBP6.21□□□□□ -1.42
SYNE1-211ENST00000413186 FAM19A3Q7Z5A8 133 aa6.21□□□□□ -1.42
SYNE1-211ENST00000413186 SPINK1P00995 79 aa6.21□□□□□ -1.42
SYNE1-211ENST00000413186 LINC00467Q9BRT7 94 aa6.21□□□□□ -1.42
SYNE1-211ENST00000413186 IMUPQ9GZP8 106 aa6.21□□□□□ -1.42
SYNE1-211ENST00000413186 H3BS24 57 aa6.2□□□□□ -1.42
SYNE1-211ENST00000413186 NDUFC1O43677 76 aa6.2□□□□□ -1.42
SYNE1-211ENST00000413186 LINC01620Q4KN68 170 aa6.2□□□□□ -1.42
SYNE1-211ENST00000413186 Q6ZQY7 126 aa6.2□□□□□ -1.42
SYNE1-211ENST00000413186 ATRQ13535 2644 aa6.2□□□□□ -1.42
SYNE1-211ENST00000413186 H0YGX0 51 aa6.2□□□□□ -1.42
SYNE1-211ENST00000413186 Q6ZQT7 251 aa6.2□□□□□ -1.42
SYNE1-211ENST00000413186 ZZEF1O43149 2961 aa6.2□□□□□ -1.42
SYNE1-211ENST00000413186 TRIAP1O43715 76 aa6.2□□□□□ -1.42
SYNE1-211ENST00000413186 Q6ZVQ6 151 aa6.2□□□□□ -1.42
SYNE1-211ENST00000413186 LECT2O14960 151 aa6.19□□□□□ -1.42
SYNE1-211ENST00000413186 P0DMU3 169 aa6.19□□□□□ -1.42
SYNE1-211ENST00000413186 FAM231AP0DMU4 169 aa6.19□□□□□ -1.42
SYNE1-211ENST00000413186 FAM231CP0DMU5 169 aa6.19□□□□□ -1.42
SYNE1-211ENST00000413186 TMEM256-PLSCR3K7ERE1 68 aa6.19□□□□□ -1.42
SYNE1-211ENST00000413186 LINC00694P0DN24 101 aa6.19□□□□□ -1.42
SYNE1-211ENST00000413186 REG3AQ06141 175 aa6.19□□□□□ -1.42
SYNE1-211ENST00000413186 IGKV2D-24A0A075B6R9 120 aa6.18□□□□□ -1.42
SYNE1-211ENST00000413186 TRBV7-6A0A0J9YX20 115 aa6.18□□□□□ -1.42
SYNE1-211ENST00000413186 M0QY20 66 aa6.18□□□□□ -1.42
SYNE1-211ENST00000413186 CLPSL2Q6UWE3 100 aa6.18□□□□□ -1.42
SYNE1-211ENST00000413186 RETNLBQ9BQ08 111 aa6.18□□□□□ -1.42
SYNE1-211ENST00000413186 CR1P17927 2039 aa6.18□□□□□ -1.42
SYNE1-211ENST00000413186 H7C423 109 aa6.18□□□□□ -1.42
SYNE1-211ENST00000413186 TCL1BO95988 128 aa6.18□□□□□ -1.42
SYNE1-211ENST00000413186 NHLRC4P0CG21 123 aaPredicted RBP6.18□□□□□ -1.42
SYNE1-211ENST00000413186 TIRAPP58753 221 aa6.18□□□□□ -1.42
SYNE1-211ENST00000413186 SSBP3-AS1Q7Z2R9 100 aa6.18□□□□□ -1.42
SYNE1-211ENST00000413186 POM121L12Q8N7R1 296 aa6.18□□□□□ -1.42
SYNE1-211ENST00000413186 RPL18AQ02543 176 aaKnown RBP6.17□□□□□ -1.42
SYNE1-211ENST00000413186 ENHOQ6UWT2 76 aa6.17□□□□□ -1.42
SYNE1-211ENST00000413186 NEXN-AS1Q8NBZ9 246 aa6.17□□□□□ -1.42
SYNE1-211ENST00000413186 WFDC13Q8IUB5 93 aa6.17□□□□□ -1.42
SYNE1-211ENST00000413186 NRACQ8N912 160 aa6.17□□□□□ -1.42
SYNE1-211ENST00000413186 CXCL6P80162 114 aa6.16□□□□□ -1.42
SYNE1-211ENST00000413186 PYGO1Q9Y3Y4 419 aa6.16□□□□□ -1.42
SYNE1-211ENST00000413186 IGHV3-30P01768 117 aa6.16□□□□□ -1.42
SYNE1-211ENST00000413186 IGHV3-33P01772 117 aa6.16□□□□□ -1.42
SYNE1-211ENST00000413186 IGHV3-30-3P0DP02 117 aa6.16□□□□□ -1.42
SYNE1-211ENST00000413186 IGHV3-30-5P0DP03 117 aa6.16□□□□□ -1.42
SYNE1-211ENST00000413186 LINC00310P59036 64 aa6.16□□□□□ -1.42
SYNE1-211ENST00000413186 CSNK1G2-AS1Q8NCQ2 148 aa6.16□□□□□ -1.42
SYNE1-211ENST00000413186 PLA2G2DQ9UNK4 145 aa6.16□□□□□ -1.42
SYNE1-211ENST00000413186 A0A0J9YXV3 536 aa6.16□□□□□ -1.42
SYNE1-211ENST00000413186 ZNF73O43830 326 aaPredicted RBP6.16□□□□□ -1.42
SYNE1-211ENST00000413186 MT-ATP8P03928 68 aa6.16□□□□□ -1.42
SYNE1-211ENST00000413186 Q9HAA7 133 aa6.16□□□□□ -1.42
SYNE1-211ENST00000413186 PRO0628Q9UI54 55 aa6.16□□□□□ -1.42
SYNE1-211ENST00000413186 NCR3O14931 201 aa6.16□□□□□ -1.42
SYNE1-211ENST00000413186 XCL1P47992 114 aa6.16□□□□□ -1.42
SYNE1-211ENST00000413186 Q9H8V8 135 aa6.15□□□□□ -1.42
SYNE1-211ENST00000413186 RPL39P62891 51 aaKnown RBP6.15□□□□□ -1.42
SYNE1-211ENST00000413186 SPINK6Q6UWN8 80 aa6.15□□□□□ -1.42
SYNE1-211ENST00000413186 IGHV1-58A0A0C4DH39 117 aa6.15□□□□□ -1.43
SYNE1-211ENST00000413186 KPRPQ5T749 579 aaPredicted RBP6.15□□□□□ -1.43
SYNE1-211ENST00000413186 SND1-IT1Q9HBX3 110 aa6.15□□□□□ -1.43
SYNE1-211ENST00000413186 AGRNO00468 2067 aa6.14□□□□□ -1.43
SYNE1-211ENST00000413186 ACYP2P14621 99 aa6.14□□□□□ -1.43
SYNE1-211ENST00000413186 KLK12Q9UKR0 248 aa6.14□□□□□ -1.43
SYNE1-211ENST00000413186 TRBV6-8A0A0A6YYG3 113 aa6.14□□□□□ -1.43
SYNE1-211ENST00000413186 POLR2KP53803 58 aaKnown RBP6.14□□□□□ -1.43
SYNE1-211ENST00000413186 TRBV30A0A0K0K1B3 111 aa6.14□□□□□ -1.43
SYNE1-211ENST00000413186 C8orf87E5RJ46 101 aa6.14□□□□□ -1.43
SYNE1-211ENST00000413186 PRM2P04554 102 aa6.14□□□□□ -1.43
SYNE1-211ENST00000413186 PDE6GP18545 87 aa6.14□□□□□ -1.43
SYNE1-211ENST00000413186 FAM19A5Q7Z5A7 132 aaPredicted RBP6.14□□□□□ -1.43
SYNE1-211ENST00000413186 SPATA3Q8NHX4 192 aa6.14□□□□□ -1.43
SYNE1-211ENST00000413186 FAM19A4Q96LR4 140 aa6.14□□□□□ -1.43
SYNE1-211ENST00000413186 COL12A1Q99715 3063 aa6.14□□□□□ -1.43
SYNE1-211ENST00000413186 Q8N976 141 aa6.14□□□□□ -1.43
SYNE1-211ENST00000413186 MAST4O15021 2626 aa6.13□□□□□ -1.43
SYNE1-211ENST00000413186 TEP1Q99973 2627 aaKnown RBP6.12□□□□□ -1.43
SYNE1-211ENST00000413186 FXYD2P54710 66 aa6.12□□□□□ -1.43
SYNE1-211ENST00000413186 LELP1Q5T871 98 aa6.12□□□□□ -1.43
SYNE1-211ENST00000413186 C5orf38Q86SI9 138 aa6.12□□□□□ -1.43
SYNE1-211ENST00000413186 CAMK2N2Q96S95 79 aa6.12□□□□□ -1.43
SYNE1-211ENST00000413186 HIGD2AQ9BW72 106 aa6.12□□□□□ -1.43
SYNE1-211ENST00000413186 CCDC179H3BU77 68 aa6.12□□□□□ -1.43
SYNE1-211ENST00000413186 URB1-AS1Q96HZ7 61 aa6.12□□□□□ -1.43
SYNE1-211ENST00000413186 IGLV10-54A0A075B6I4 117 aa6.11□□□□□ -1.43
SYNE1-211ENST00000413186 KRTAP10-3P60369 221 aa6.11□□□□□ -1.43
SYNE1-211ENST00000413186 UBE2D3P61077 147 aa6.11□□□□□ -1.43
SYNE1-211ENST00000413186 UBE2D2P62837 147 aa6.11□□□□□ -1.43
SYNE1-211ENST00000413186 A0A0J9YXY3 114 aa6.11□□□□□ -1.43
SYNE1-211ENST00000413186 LUZP6Q538Z0 58 aa6.11□□□□□ -1.43
SYNE1-211ENST00000413186 NFE4Q86UQ8 179 aa6.11□□□□□ -1.43
SYNE1-211ENST00000413186 H3BQ85 93 aa6.1□□□□□ -1.43
SYNE1-211ENST00000413186 IGLV4-3A0A075B6K6 122 aa6.1□□□□□ -1.43
SYNE1-211ENST00000413186 C14orf177Q52M58 125 aa6.1□□□□□ -1.43
SYNE1-211ENST00000413186 CHCHD7Q9BUK0 85 aa6.09□□□□□ -1.43
SYNE1-211ENST00000413186 TP73-AS1Q9UF72 201 aa6.09□□□□□ -1.43
SYNE1-211ENST00000413186 TACC2O95359 2948 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms