RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 PPDPFQ9H3Y8 114 aa5.91□□□□□ -1.46
SNX13-201ENST00000409076 CDC42SE2Q9NRR3 84 aa5.91□□□□□ -1.46
SNX13-201ENST00000409076 HILS1P60008 231 aa5.91□□□□□ -1.46
SNX13-201ENST00000409076 SPANXDQ9BXN6 97 aa5.9□□□□□ -1.46
SNX13-201ENST00000409076 SPANXCQ9NY87 97 aa5.9□□□□□ -1.46
SNX13-201ENST00000409076 PYGO1Q9Y3Y4 419 aa5.9□□□□□ -1.46
SNX13-201ENST00000409076 CXCL5P42830 114 aa5.9□□□□□ -1.47
SNX13-201ENST00000409076 HIGD2BQ4VC39 106 aa5.89□□□□□ -1.47
SNX13-201ENST00000409076 C6orf223Q8N319 242 aa5.89□□□□□ -1.47
SNX13-201ENST00000409076 C4orf3Q8WVX3 66 aa5.89□□□□□ -1.47
SNX13-201ENST00000409076 SBSPONQ8IVN8 264 aa5.89□□□□□ -1.47
SNX13-201ENST00000409076 TMEM86BQ8N661 226 aa5.89□□□□□ -1.47
SNX13-201ENST00000409076 FAM110AQ9BQ89 295 aa5.89□□□□□ -1.47
SNX13-201ENST00000409076 RPL18AQ02543 176 aaKnown RBP5.89□□□□□ -1.47
SNX13-201ENST00000409076 KLK12Q9UKR0 248 aa5.88□□□□□ -1.47
SNX13-201ENST00000409076 TENM1Q9UKZ4 2725 aa5.88□□□□□ -1.47
SNX13-201ENST00000409076 PKD1L1Q8TDX9 2849 aa5.88□□□□□ -1.47
SNX13-201ENST00000409076 DSCR9P59020 149 aa5.88□□□□□ -1.47
SNX13-201ENST00000409076 SS18Q15532 418 aa5.88□□□□□ -1.47
SNX13-201ENST00000409076 FAM222AQ5U5X8 452 aa5.88□□□□□ -1.47
SNX13-201ENST00000409076 DEFB105AQ8NG35 78 aa5.88□□□□□ -1.47
SNX13-201ENST00000409076 TRAV13-2A0A0B4J235 113 aa5.87□□□□□ -1.47
SNX13-201ENST00000409076 IGHV4-28A0A0C4DH34 117 aa5.87□□□□□ -1.47
SNX13-201ENST00000409076 BRI3O95415 125 aa5.87□□□□□ -1.47
SNX13-201ENST00000409076 FBN1P35555 2871 aaKnown RBP5.87□□□□□ -1.47
SNX13-201ENST00000409076 TRAV25A0A0B4J276 109 aa5.87□□□□□ -1.47
SNX13-201ENST00000409076 M0QXV9 152 aa5.87□□□□□ -1.47
SNX13-201ENST00000409076 LINC01006Q8NI28 216 aa5.87□□□□□ -1.47
SNX13-201ENST00000409076 TMEM126AQ9H061 195 aa5.87□□□□□ -1.47
SNX13-201ENST00000409076 RNF152Q8N8N0 203 aa5.86□□□□□ -1.47
SNX13-201ENST00000409076 DSCR8Q96T75 97 aa5.86□□□□□ -1.47
SNX13-201ENST00000409076 TRBV6-8A0A0A6YYG3 113 aa5.86□□□□□ -1.47
SNX13-201ENST00000409076 C6orf99Q4VX62 202 aa5.86□□□□□ -1.47
SNX13-201ENST00000409076 ENHOQ6UWT2 76 aa5.86□□□□□ -1.47
SNX13-201ENST00000409076 SPATA3Q8NHX4 192 aa5.86□□□□□ -1.47
SNX13-201ENST00000409076 DAD1P61803 113 aa5.86□□□□□ -1.47
SNX13-201ENST00000409076 LINC00846Q9NV44 126 aa5.86□□□□□ -1.47
SNX13-201ENST00000409076 TRBV10-1A0A0K0K1A3 114 aa5.85□□□□□ -1.47
SNX13-201ENST00000409076 COPS9Q8WXC6 57 aa5.85□□□□□ -1.47
SNX13-201ENST00000409076 IGKV2-28A0A075B6P5 120 aa5.85□□□□□ -1.47
SNX13-201ENST00000409076 J3QLI3 93 aa5.85□□□□□ -1.47
SNX13-201ENST00000409076 IGKV2D-28P01615 120 aa5.85□□□□□ -1.47
SNX13-201ENST00000409076 FAM19A1Q7Z5A9 133 aa5.85□□□□□ -1.47
SNX13-201ENST00000409076 LINC00959A0A1B0GUT2 108 aa5.84□□□□□ -1.47
SNX13-201ENST00000409076 INAFM2P0DMQ5 153 aa5.84□□□□□ -1.47
SNX13-201ENST00000409076 KIR2DL5BQ8NHK3 375 aa5.84□□□□□ -1.47
SNX13-201ENST00000409076 C16orf74Q96GX8 76 aa5.84□□□□□ -1.47
SNX13-201ENST00000409076 ORMDL1Q9P0S3 153 aa5.84□□□□□ -1.47
SNX13-201ENST00000409076 NSD1Q96L73 2696 aaPredicted RBP5.84□□□□□ -1.47
SNX13-201ENST00000409076 UNQ6190/PRO20217Q6UXQ8 127 aa5.84□□□□□ -1.48
SNX13-201ENST00000409076 C20orf197Q8N268 126 aa5.83□□□□□ -1.48
SNX13-201ENST00000409076 CHCHD10Q8WYQ3 142 aaPredicted RBP5.83□□□□□ -1.48
SNX13-201ENST00000409076 RETNQ9HD89 108 aa5.83□□□□□ -1.48
SNX13-201ENST00000409076 SNURFQ9Y675 71 aa5.83□□□□□ -1.48
SNX13-201ENST00000409076 LINC00643Q86TS7 51 aa5.82□□□□□ -1.48
SNX13-201ENST00000409076 LRRC75A-AS1Q8N1F1 130 aa5.82□□□□□ -1.48
SNX13-201ENST00000409076 ZNF843Q8N446 348 aa5.82□□□□□ -1.48
SNX13-201ENST00000409076 TENM4Q6N022 2769 aa5.82□□□□□ -1.48
SNX13-201ENST00000409076 FHL2Q14192 279 aa5.82□□□□□ -1.48
SNX13-201ENST00000409076 C10orf25Q5T742 122 aa5.81□□□□□ -1.48
SNX13-201ENST00000409076 GHRHP01286 108 aa5.81□□□□□ -1.48
SNX13-201ENST00000409076 SPAG11BQ08648 103 aa5.81□□□□□ -1.48
SNX13-201ENST00000409076 IGLV5-39A0A0G2JS06 123 aa5.81□□□□□ -1.48
SNX13-201ENST00000409076 REG3AQ06141 175 aa5.81□□□□□ -1.48
SNX13-201ENST00000409076 BEAN1Q3B7T3 259 aa5.8□□□□□ -1.48
SNX13-201ENST00000409076 KLK9Q2XQG4 91 aa5.8□□□□□ -1.48
SNX13-201ENST00000409076 Q6Q795 121 aa5.8□□□□□ -1.48
SNX13-201ENST00000409076 Q8N9L7 120 aa5.8□□□□□ -1.48
SNX13-201ENST00000409076 CYSTM1Q9H1C7 97 aa5.8□□□□□ -1.48
SNX13-201ENST00000409076 OTOGQ6ZRI0 2925 aa5.8□□□□□ -1.48
SNX13-201ENST00000409076 TRACP01848 142 aa5.8□□□□□ -1.48
SNX13-201ENST00000409076 GIG44P09565 113 aaPredicted RBP5.8□□□□□ -1.48
SNX13-201ENST00000409076 C3orf22Q8N5N4 141 aa5.8□□□□□ -1.48
SNX13-201ENST00000409076 MRAPQ8TCY5 172 aa5.8□□□□□ -1.48
SNX13-201ENST00000409076 TRRAPQ9Y4A5 3859 aa5.8□□□□□ -1.48
SNX13-201ENST00000409076 Q6ZQY7 126 aa5.79□□□□□ -1.48
SNX13-201ENST00000409076 INAFM1C9JVW0 142 aa5.79□□□□□ -1.48
SNX13-201ENST00000409076 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.79□□□□□ -1.48
SNX13-201ENST00000409076 CELA1Q9UNI1 258 aa5.79□□□□□ -1.48
SNX13-201ENST00000409076 USP17L23D6RBM5 183 aa5.79□□□□□ -1.48
SNX13-201ENST00000409076 IGHV3OR16-9A0A0B4J2B5 98 aa5.78□□□□□ -1.48
SNX13-201ENST00000409076 C3orf84H3BNL1 204 aa5.78□□□□□ -1.48
SNX13-201ENST00000409076 M0R2N4 97 aa5.78□□□□□ -1.48
SNX13-201ENST00000409076 TIMM17BO60830 172 aa5.78□□□□□ -1.48
SNX13-201ENST00000409076 IGKV2D-24A0A075B6R9 120 aa5.77□□□□□ -1.49
SNX13-201ENST00000409076 A0A096LNT2 108 aa5.77□□□□□ -1.49
SNX13-201ENST00000409076 UBL5Q9BZL1 73 aa5.77□□□□□ -1.49
SNX13-201ENST00000409076 ZNF561-AS1K7EIQ3 104 aa5.77□□□□□ -1.49
SNX13-201ENST00000409076 PRO0255Q9UI72 69 aa5.77□□□□□ -1.49
SNX13-201ENST00000409076 TRBV6-4A0A1B0GX49 114 aa5.76□□□□□ -1.49
SNX13-201ENST00000409076 UPK3BQ9BT76 320 aa5.76□□□□□ -1.49
SNX13-201ENST00000409076 RPL28P46779 137 aaKnown RBP5.76□□□□□ -1.49
SNX13-201ENST00000409076 FAM19A5Q7Z5A7 132 aaPredicted RBP5.76□□□□□ -1.49
SNX13-201ENST00000409076 CSDC2Q9Y534 153 aaKnown RBP5.76□□□□□ -1.49
SNX13-201ENST00000409076 CYSRT1A8MQ03 144 aa5.76□□□□□ -1.49
SNX13-201ENST00000409076 H0YGX0 51 aa5.76□□□□□ -1.49
SNX13-201ENST00000409076 OXLD1Q5BKU9 147 aa5.76□□□□□ -1.49
SNX13-201ENST00000409076 IGLV5-45A0A087WSX0 123 aa5.75□□□□□ -1.49
SNX13-201ENST00000409076 IBA57-AS1B1ANH7 110 aa5.75□□□□□ -1.49
SNX13-201ENST00000409076 ACYP1P07311 99 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms