RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 NOTCH1P46531 2555 aa8.9□□□□□ -0.98
PPP4R1-202ENST00000400555 CMC4P56277 68 aaPredicted RBP8.89□□□□□ -0.99
PPP4R1-202ENST00000400555 LINC00959A0A1B0GUT2 108 aa8.89□□□□□ -0.99
PPP4R1-202ENST00000400555 NCR3O14931 201 aa8.89□□□□□ -0.99
PPP4R1-202ENST00000400555 CITED1Q99966 193 aa8.88□□□□□ -0.99
PPP4R1-202ENST00000400555 PLAC8L1A1L4L8 177 aa8.88□□□□□ -0.99
PPP4R1-202ENST00000400555 DAD1P61803 113 aa8.87□□□□□ -0.99
PPP4R1-202ENST00000400555 MAST4O15021 2626 aa8.87□□□□□ -0.99
PPP4R1-202ENST00000400555 TENM1Q9UKZ4 2725 aa8.87□□□□□ -0.99
PPP4R1-202ENST00000400555 SPATA3Q8NHX4 192 aa8.87□□□□□ -0.99
PPP4R1-202ENST00000400555 CSDC2Q9Y534 153 aaKnown RBP8.86□□□□□ -0.99
PPP4R1-202ENST00000400555 S100A7L2Q5SY68 101 aa8.86□□□□□ -0.99
PPP4R1-202ENST00000400555 SDIM1Q6ZPB5 146 aa8.86□□□□□ -0.99
PPP4R1-202ENST00000400555 IGHV3OR16-9A0A0B4J2B5 98 aa8.85□□□□□ -0.99
PPP4R1-202ENST00000400555 HIST1H4AP62805 103 aaKnown RBP8.85□□□□□ -0.99
PPP4R1-202ENST00000400555 IGKV2-28A0A075B6P5 120 aa8.85□□□□□ -0.99
PPP4R1-202ENST00000400555 IGKV2D-28P01615 120 aa8.85□□□□□ -0.99
PPP4R1-202ENST00000400555 NHLRC4P0CG21 123 aaPredicted RBP8.85□□□□□ -0.99
PPP4R1-202ENST00000400555 PRO0255Q9UI72 69 aa8.84□□□□□ -0.99
PPP4R1-202ENST00000400555 SHISA2Q6UWI4 295 aa8.84□□□□□ -0.99
PPP4R1-202ENST00000400555 KLK12Q9UKR0 248 aa8.84□□□□□ -0.99
PPP4R1-202ENST00000400555 INAFM1C9JVW0 142 aa8.83□□□□□ -1
PPP4R1-202ENST00000400555 C19orf73Q9NVV2 129 aa8.83□□□□□ -1
PPP4R1-202ENST00000400555 STAB1Q9NY15 2570 aa8.83□□□□□ -1
PPP4R1-202ENST00000400555 C9orf129Q5T035 196 aaKnown RBP8.83□□□□□ -1
PPP4R1-202ENST00000400555 SMIM20Q8N5G0 67 aa8.83□□□□□ -1
PPP4R1-202ENST00000400555 NBEAL1Q6ZS30 2694 aa8.83□□□□□ -1
PPP4R1-202ENST00000400555 TRACP01848 142 aa8.82□□□□□ -1
PPP4R1-202ENST00000400555 INAFM2P0DMQ5 153 aa8.82□□□□□ -1
PPP4R1-202ENST00000400555 IL17DQ8TAD2 202 aa8.82□□□□□ -1
PPP4R1-202ENST00000400555 CSNK1G2-AS1Q8NCQ2 148 aa8.82□□□□□ -1
PPP4R1-202ENST00000400555 CHCHD10Q8WYQ3 142 aaPredicted RBP8.82□□□□□ -1
PPP4R1-202ENST00000400555 A0A087WZ39 114 aa8.82□□□□□ -1
PPP4R1-202ENST00000400555 J3QKU1 62 aa8.82□□□□□ -1
PPP4R1-202ENST00000400555 SMCR5Q8TEV8 140 aa8.81□□□□□ -1
PPP4R1-202ENST00000400555 IBA57-AS1B1ANH7 110 aa8.81□□□□□ -1
PPP4R1-202ENST00000400555 C6orf223Q8N319 242 aa8.81□□□□□ -1
PPP4R1-202ENST00000400555 REG3AQ06141 175 aa8.8□□□□□ -1
PPP4R1-202ENST00000400555 HILS1P60008 231 aa8.8□□□□□ -1
PPP4R1-202ENST00000400555 OVOL2Q9BRP0 275 aa8.8□□□□□ -1
PPP4R1-202ENST00000400555 M0QXV9 152 aa8.8□□□□□ -1
PPP4R1-202ENST00000400555 C9orf153Q5TBE3 101 aa8.8□□□□□ -1
PPP4R1-202ENST00000400555 XAGE1AQ9HD64 81 aa8.8□□□□□ -1
PPP4R1-202ENST00000400555 LY6G6DO95868 133 aa8.8□□□□□ -1
PPP4R1-202ENST00000400555 KRTAP10-3P60369 221 aa8.8□□□□□ -1
PPP4R1-202ENST00000400555 OTOGQ6ZRI0 2925 aa8.79□□□□□ -1
PPP4R1-202ENST00000400555 AKAP9Q99996 3911 aa8.79□□□□□ -1
PPP4R1-202ENST00000400555 IGHV4-28A0A0C4DH34 117 aa8.79□□□□□ -1
PPP4R1-202ENST00000400555 RPL28P46779 137 aaKnown RBP8.79□□□□□ -1
PPP4R1-202ENST00000400555 A0A087WVE0 104 aa8.79□□□□□ -1
PPP4R1-202ENST00000400555 WFDC9Q8NEX5 89 aa8.79□□□□□ -1
PPP4R1-202ENST00000400555 LAMTOR3Q9UHA4 124 aa8.79□□□□□ -1
PPP4R1-202ENST00000400555 PDZD2O15018 2839 aa8.78□□□□□ -1
PPP4R1-202ENST00000400555 H0YGX0 51 aa8.78□□□□□ -1
PPP4R1-202ENST00000400555 RPL18AQ02543 176 aaKnown RBP8.78□□□□□ -1
PPP4R1-202ENST00000400555 UNQ6190/PRO20217Q6UXQ8 127 aa8.78□□□□□ -1
PPP4R1-202ENST00000400555 LINC00643Q86TS7 51 aa8.78□□□□□ -1
PPP4R1-202ENST00000400555 FAM110AQ9BQ89 295 aa8.78□□□□□ -1
PPP4R1-202ENST00000400555 ORMDL1Q9P0S3 153 aa8.78□□□□□ -1
PPP4R1-202ENST00000400555 KRTAP1-1Q07627 177 aa8.78□□□□□ -1
PPP4R1-202ENST00000400555 C6orf99Q4VX62 202 aa8.78□□□□□ -1
PPP4R1-202ENST00000400555 CELA1Q9UNI1 258 aa8.77□□□□□ -1.01
PPP4R1-202ENST00000400555 ACYP1P07311 99 aa8.76□□□□□ -1.01
PPP4R1-202ENST00000400555 SPAG11BQ08648 103 aa8.76□□□□□ -1.01
PPP4R1-202ENST00000400555 HIGD2BQ4VC39 106 aa8.76□□□□□ -1.01
PPP4R1-202ENST00000400555 X6R8D5 127 aa8.76□□□□□ -1.01
PPP4R1-202ENST00000400555 CXCL5P42830 114 aa8.76□□□□□ -1.01
PPP4R1-202ENST00000400555 NSD1Q96L73 2696 aaPredicted RBP8.76□□□□□ -1.01
PPP4R1-202ENST00000400555 C10orf25Q5T742 122 aa8.74□□□□□ -1.01
PPP4R1-202ENST00000400555 LINC00846Q9NV44 126 aa8.74□□□□□ -1.01
PPP4R1-202ENST00000400555 FAM240AA0A1B0GVK7 77 aa8.74□□□□□ -1.01
PPP4R1-202ENST00000400555 KLK5Q9Y337 293 aaPredicted RBP8.74□□□□□ -1.01
PPP4R1-202ENST00000400555 C16orf95Q9H693 158 aa8.74□□□□□ -1.01
PPP4R1-202ENST00000400555 MGAM2Q2M2H8 2515 aa8.73□□□□□ -1.01
PPP4R1-202ENST00000400555 RETNQ9HD89 108 aa8.73□□□□□ -1.01
PPP4R1-202ENST00000400555 C9orf66Q5T8R8 295 aa8.73□□□□□ -1.01
PPP4R1-202ENST00000400555 COL6A5A8TX70 2615 aa8.72□□□□□ -1.01
PPP4R1-202ENST00000400555 A0A1B0GX51 115 aa8.72□□□□□ -1.01
PPP4R1-202ENST00000400555 APOC4P55056 127 aa8.72□□□□□ -1.01
PPP4R1-202ENST00000400555 CD164L2Q6UWJ8 174 aa8.72□□□□□ -1.01
PPP4R1-202ENST00000400555 KIR2DL5BQ8NHK3 375 aa8.72□□□□□ -1.01
PPP4R1-202ENST00000400555 Q6Q795 121 aa8.72□□□□□ -1.01
PPP4R1-202ENST00000400555 SPART-AS1P0CW21 52 aa8.71□□□□□ -1.01
PPP4R1-202ENST00000400555 HAMPP81172 84 aa8.71□□□□□ -1.01
PPP4R1-202ENST00000400555 MRPL23Q16540 153 aaKnown RBP8.71□□□□□ -1.01
PPP4R1-202ENST00000400555 PKD1L1Q8TDX9 2849 aa8.71□□□□□ -1.01
PPP4R1-202ENST00000400555 Q8IZM0 81 aa8.71□□□□□ -1.02
PPP4R1-202ENST00000400555 TMEM126AQ9H061 195 aa8.71□□□□□ -1.02
PPP4R1-202ENST00000400555 OXLD1Q5BKU9 147 aa8.71□□□□□ -1.02
PPP4R1-202ENST00000400555 BAHCC1Q9P281 2608 aa8.71□□□□□ -1.02
PPP4R1-202ENST00000400555 CYSRT1A8MQ03 144 aa8.7□□□□□ -1.02
PPP4R1-202ENST00000400555 FAM19A3Q7Z5A8 133 aa8.7□□□□□ -1.02
PPP4R1-202ENST00000400555 TRAV23DV6A0A075B6W5 121 aa8.69□□□□□ -1.02
PPP4R1-202ENST00000400555 ZNF561-AS1K7EIQ3 104 aa8.69□□□□□ -1.02
PPP4R1-202ENST00000400555 C22orf24Q9Y442 160 aa8.69□□□□□ -1.02
PPP4R1-202ENST00000400555 DEFB121Q5J5C9 76 aa8.69□□□□□ -1.02
PPP4R1-202ENST00000400555 hADV29S1A0JD25 119 aa8.68□□□□□ -1.02
PPP4R1-202ENST00000400555 LYRM9A8MSI8 78 aa8.68□□□□□ -1.02
PPP4R1-202ENST00000400555 TRBV7-7A0A0K0K1E9 115 aa8.67□□□□□ -1.02
PPP4R1-202ENST00000400555 A0A1B0GUV1 79 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms