RNA–Protein interactions for RNA: ENST00000396966.6

SCNN1A-205, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3 BASIC

Gene SCNN1A, Length 2,336 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-205ENST00000396966 C11orf45Q8TAV5 145 aa11.84□□□□□ -0.51
SCNN1A-205ENST00000396966 M0QXV9 152 aa11.83□□□□□ -0.51
SCNN1A-205ENST00000396966 SCGB1A1P11684 91 aa11.83□□□□□ -0.51
SCNN1A-205ENST00000396966 TM2D3Q9BRN9 247 aa11.83□□□□□ -0.51
SCNN1A-205ENST00000396966 CDIP1Q9H305 208 aa11.83□□□□□ -0.51
SCNN1A-205ENST00000396966 COX6CP09669 75 aa11.83□□□□□ -0.52
SCNN1A-205ENST00000396966 LELP1Q5T871 98 aa11.82□□□□□ -0.52
SCNN1A-205ENST00000396966 MRAPQ8TCY5 172 aa11.82□□□□□ -0.52
SCNN1A-205ENST00000396966 CLEC2BQ92478 149 aa11.82□□□□□ -0.52
SCNN1A-205ENST00000396966 SOSTDC1Q6X4U4 206 aa11.81□□□□□ -0.52
SCNN1A-205ENST00000396966 NANOS2P60321 138 aaKnown RBP11.81□□□□□ -0.52
SCNN1A-205ENST00000396966 NTN5Q8WTR8 489 aaPredicted RBP11.8□□□□□ -0.52
SCNN1A-205ENST00000396966 LINC00959A0A1B0GUT2 108 aa11.8□□□□□ -0.52
SCNN1A-205ENST00000396966 TRBV10-2A0A0K0K1G8 114 aa11.79□□□□□ -0.52
SCNN1A-205ENST00000396966 SS18Q15532 418 aa11.79□□□□□ -0.52
SCNN1A-205ENST00000396966 DEFB131BA0A096LNP1 70 aa11.78□□□□□ -0.52
SCNN1A-205ENST00000396966 TOMM7Q9P0U1 55 aa11.78□□□□□ -0.52
SCNN1A-205ENST00000396966 LYPD5Q6UWN5 251 aa11.78□□□□□ -0.52
SCNN1A-205ENST00000396966 LINC01600Q96MT4 127 aa11.78□□□□□ -0.52
SCNN1A-205ENST00000396966 HERV-K104P63124 156 aa11.77□□□□□ -0.52
SCNN1A-205ENST00000396966 NOTCH1P46531 2555 aa11.77□□□□□ -0.52
SCNN1A-205ENST00000396966 TEX49A0A1B0GTD5 131 aa11.77□□□□□ -0.53
SCNN1A-205ENST00000396966 ANGP03950 147 aaKnown RBP11.76□□□□□ -0.53
SCNN1A-205ENST00000396966 C2orf82Q6UX34 121 aa11.76□□□□□ -0.53
SCNN1A-205ENST00000396966 COX7B2Q8TF08 81 aa11.76□□□□□ -0.53
SCNN1A-205ENST00000396966 MT-ATP8P03928 68 aa11.76□□□□□ -0.53
SCNN1A-205ENST00000396966 XGP55808 180 aa11.76□□□□□ -0.53
SCNN1A-205ENST00000396966 COPS9Q8WXC6 57 aa11.76□□□□□ -0.53
SCNN1A-205ENST00000396966 IGHV3OR16-9A0A0B4J2B5 98 aa11.75□□□□□ -0.53
SCNN1A-205ENST00000396966 LST1O00453 97 aa11.75□□□□□ -0.53
SCNN1A-205ENST00000396966 LINC00269Q8N2A0 174 aa11.75□□□□□ -0.53
SCNN1A-205ENST00000396966 CLPSL2Q6UWE3 100 aa11.75□□□□□ -0.53
SCNN1A-205ENST00000396966 C5orf38Q86SI9 138 aa11.74□□□□□ -0.53
SCNN1A-205ENST00000396966 A0A087WZ39 114 aa11.73□□□□□ -0.53
SCNN1A-205ENST00000396966 REG3AQ06141 175 aa11.73□□□□□ -0.53
SCNN1A-205ENST00000396966 TRAV10A0A0B4J240 114 aa11.72□□□□□ -0.53
SCNN1A-205ENST00000396966 XCL1P47992 114 aa11.72□□□□□ -0.53
SCNN1A-205ENST00000396966 TENM3Q9P273 2699 aa11.72□□□□□ -0.53
SCNN1A-205ENST00000396966 NBEAL1Q6ZS30 2694 aa11.72□□□□□ -0.53
SCNN1A-205ENST00000396966 Q8N3U1 123 aa11.71□□□□□ -0.53
SCNN1A-205ENST00000396966 MIR7-3HGQ8N6C7 128 aa11.71□□□□□ -0.53
SCNN1A-205ENST00000396966 UBE2WQ96B02 151 aa11.71□□□□□ -0.53
SCNN1A-205ENST00000396966 H3BT86 120 aa11.69□□□□□ -0.54
SCNN1A-205ENST00000396966 LINC00158P58513 81 aa11.69□□□□□ -0.54
SCNN1A-205ENST00000396966 COX7A2LO14548 114 aa11.69□□□□□ -0.54
SCNN1A-205ENST00000396966 LINC01561Q8N1V8 128 aa11.69□□□□□ -0.54
SCNN1A-205ENST00000396966 CD164L2Q6UWJ8 174 aa11.68□□□□□ -0.54
SCNN1A-205ENST00000396966 CHCHD10Q8WYQ3 142 aaPredicted RBP11.68□□□□□ -0.54
SCNN1A-205ENST00000396966 PPDPFQ9H3Y8 114 aa11.68□□□□□ -0.54
SCNN1A-205ENST00000396966 ESRGQ1W209 222 aa11.68□□□□□ -0.54
SCNN1A-205ENST00000396966 KLK12Q9UKR0 248 aa11.68□□□□□ -0.54
SCNN1A-205ENST00000396966 C15orf53Q8NAA6 179 aa11.67□□□□□ -0.54
SCNN1A-205ENST00000396966 PFN2P35080 140 aa11.66□□□□□ -0.54
SCNN1A-205ENST00000396966 MGAM2Q2M2H8 2515 aa11.66□□□□□ -0.54
SCNN1A-205ENST00000396966 IGLV10-54A0A075B6I4 117 aa11.66□□□□□ -0.54
SCNN1A-205ENST00000396966 WFDC10BQ8IUB3 73 aa11.66□□□□□ -0.54
SCNN1A-205ENST00000396966 SND1-IT1Q9HBX3 110 aa11.66□□□□□ -0.54
SCNN1A-205ENST00000396966 PRR34Q9NV39 138 aa11.66□□□□□ -0.54
SCNN1A-205ENST00000396966 TRAV8-4A0A0B4J246 113 aa11.65□□□□□ -0.54
SCNN1A-205ENST00000396966 CRPP02741 224 aa11.65□□□□□ -0.54
SCNN1A-205ENST00000396966 C6orf226Q5I0X4 101 aa11.65□□□□□ -0.54
SCNN1A-205ENST00000396966 LINC00337Q8N6G1 96 aa11.65□□□□□ -0.54
SCNN1A-205ENST00000396966 B9D2Q9BPU9 175 aa11.65□□□□□ -0.54
SCNN1A-205ENST00000396966 IGKV2-28A0A075B6P5 120 aa11.64□□□□□ -0.55
SCNN1A-205ENST00000396966 IGKV2D-28P01615 120 aa11.64□□□□□ -0.55
SCNN1A-205ENST00000396966 TRAV13-2A0A0B4J235 113 aa11.63□□□□□ -0.55
SCNN1A-205ENST00000396966 IBA57-AS1B1ANH7 110 aa11.63□□□□□ -0.55
SCNN1A-205ENST00000396966 MALP21145 153 aa11.63□□□□□ -0.55
SCNN1A-205ENST00000396966 CCL18P55774 89 aa11.63□□□□□ -0.55
SCNN1A-205ENST00000396966 ENHOQ6UWT2 76 aa11.62□□□□□ -0.55
SCNN1A-205ENST00000396966 Q8IZM0 81 aa11.62□□□□□ -0.55
SCNN1A-205ENST00000396966 FAM218AQ96MZ4 157 aa11.62□□□□□ -0.55
SCNN1A-205ENST00000396966 HUWE1Q7Z6Z7 4374 aaKnown RBP11.61□□□□□ -0.55
SCNN1A-205ENST00000396966 CKS1BP61024 79 aa11.61□□□□□ -0.55
SCNN1A-205ENST00000396966 A0A1B0GV72 72 aa11.59□□□□□ -0.55
SCNN1A-205ENST00000396966 RPL28P46779 137 aaKnown RBP11.59□□□□□ -0.55
SCNN1A-205ENST00000396966 LINC01556Q5JQF7 62 aa11.59□□□□□ -0.55
SCNN1A-205ENST00000396966 SNCGO76070 127 aa11.58□□□□□ -0.56
SCNN1A-205ENST00000396966 TRACP01848 142 aa11.58□□□□□ -0.56
SCNN1A-205ENST00000396966 CFAP161Q6P656 301 aa11.58□□□□□ -0.56
SCNN1A-205ENST00000396966 SMIM11BQ8TCY0 68 aa11.57□□□□□ -0.56
SCNN1A-205ENST00000396966 BAALC-AS2P0C853 105 aa11.57□□□□□ -0.56
SCNN1A-205ENST00000396966 CXCL5P42830 114 aa11.57□□□□□ -0.56
SCNN1A-205ENST00000396966 Q9HAA7 133 aa11.57□□□□□ -0.56
SCNN1A-205ENST00000396966 NHLRC4P0CG21 123 aaPredicted RBP11.55□□□□□ -0.56
SCNN1A-205ENST00000396966 KIAA0087Q14695 138 aa11.54□□□□□ -0.56
SCNN1A-205ENST00000396966 OR13C6PQ8NH95 151 aa11.54□□□□□ -0.56
SCNN1A-205ENST00000396966 KLK5Q9Y337 293 aaPredicted RBP11.54□□□□□ -0.56
SCNN1A-205ENST00000396966 DNAH10OSP0CZ25 163 aa11.54□□□□□ -0.56
SCNN1A-205ENST00000396966 LINC00588Q9Y4M8 146 aa11.54□□□□□ -0.56
SCNN1A-205ENST00000396966 TTC32Q5I0X7 151 aa11.53□□□□□ -0.56
SCNN1A-205ENST00000396966 A0A087WYN8 130 aa11.52□□□□□ -0.57
SCNN1A-205ENST00000396966 GAGE2BQ13066 116 aa11.52□□□□□ -0.57
SCNN1A-205ENST00000396966 GAGE2EQ4V326 116 aa11.52□□□□□ -0.57
SCNN1A-205ENST00000396966 GAGE2DQ9UEU5 116 aa11.52□□□□□ -0.57
SCNN1A-205ENST00000396966 FAM240AA0A1B0GVK7 77 aa11.52□□□□□ -0.57
SCNN1A-205ENST00000396966 C22orf24Q9Y442 160 aa11.52□□□□□ -0.57
SCNN1A-205ENST00000396966 SPAG11BQ08648 103 aa11.51□□□□□ -0.57
SCNN1A-205ENST00000396966 C1orf43Q9BWL3 253 aa11.51□□□□□ -0.57
SCNN1A-205ENST00000396966 PRR3P79522 188 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms