RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 IFITM1P13164 125 aa10.22□□□□□ -0.77
TM9SF1-202ENST00000396854 LINC01620Q4KN68 170 aa10.22□□□□□ -0.77
TM9SF1-202ENST00000396854 DGAT2L7PQ6IED9 249 aa10.22□□□□□ -0.77
TM9SF1-202ENST00000396854 NTM-AS1Q6ZSK4 140 aa10.22□□□□□ -0.77
TM9SF1-202ENST00000396854 TMEM101Q96IK0 257 aa10.22□□□□□ -0.77
TM9SF1-202ENST00000396854 IGLV5-39A0A0G2JS06 123 aa10.21□□□□□ -0.77
TM9SF1-202ENST00000396854 HERVK_113P63121 156 aa10.21□□□□□ -0.77
TM9SF1-202ENST00000396854 CSDC2Q9Y534 153 aaKnown RBP10.21□□□□□ -0.77
TM9SF1-202ENST00000396854 MUC7Q8TAX7 377 aa10.21□□□□□ -0.78
TM9SF1-202ENST00000396854 KLK5Q9Y337 293 aaPredicted RBP10.21□□□□□ -0.78
TM9SF1-202ENST00000396854 COX6A2Q02221 97 aa10.2□□□□□ -0.78
TM9SF1-202ENST00000396854 LINC00242Q5T6M2 205 aa10.19□□□□□ -0.78
TM9SF1-202ENST00000396854 TRBV10-2A0A0K0K1G8 114 aa10.19□□□□□ -0.78
TM9SF1-202ENST00000396854 TMEM262E9PQX1 116 aa10.19□□□□□ -0.78
TM9SF1-202ENST00000396854 XGP55808 180 aa10.19□□□□□ -0.78
TM9SF1-202ENST00000396854 TRBV6-8A0A0A6YYG3 113 aa10.18□□□□□ -0.78
TM9SF1-202ENST00000396854 LYPD5Q6UWN5 251 aa10.18□□□□□ -0.78
TM9SF1-202ENST00000396854 TMEM243Q9BU79 118 aa10.18□□□□□ -0.78
TM9SF1-202ENST00000396854 APLNQ9ULZ1 77 aa10.18□□□□□ -0.78
TM9SF1-202ENST00000396854 H7C423 109 aa10.18□□□□□ -0.78
TM9SF1-202ENST00000396854 MT-ATP8P03928 68 aa10.18□□□□□ -0.78
TM9SF1-202ENST00000396854 COX6CP09669 75 aa10.18□□□□□ -0.78
TM9SF1-202ENST00000396854 NPC2P61916 151 aa10.18□□□□□ -0.78
TM9SF1-202ENST00000396854 STARD9Q9P2P6 4700 aa10.17□□□□□ -0.78
TM9SF1-202ENST00000396854 A0A1B0GV72 72 aa10.17□□□□□ -0.78
TM9SF1-202ENST00000396854 RPL13AP40429 203 aaKnown RBP10.17□□□□□ -0.78
TM9SF1-202ENST00000396854 CIRBPQ14011 172 aaKnown RBP10.17□□□□□ -0.78
TM9SF1-202ENST00000396854 SMIM1B2RUZ4 78 aa10.16□□□□□ -0.78
TM9SF1-202ENST00000396854 ESRGQ1W209 222 aa10.16□□□□□ -0.78
TM9SF1-202ENST00000396854 LELP1Q5T871 98 aa10.16□□□□□ -0.78
TM9SF1-202ENST00000396854 NTN5Q8WTR8 489 aaPredicted RBP10.16□□□□□ -0.78
TM9SF1-202ENST00000396854 Q9H8V8 135 aa10.16□□□□□ -0.78
TM9SF1-202ENST00000396854 CDC42SE2Q9NRR3 84 aa10.15□□□□□ -0.78
TM9SF1-202ENST00000396854 DAND5Q8N907 189 aa10.14□□□□□ -0.79
TM9SF1-202ENST00000396854 LINC00308Q8TCZ7 52 aa10.14□□□□□ -0.79
TM9SF1-202ENST00000396854 H3BT86 120 aa10.14□□□□□ -0.79
TM9SF1-202ENST00000396854 LST1O00453 97 aa10.14□□□□□ -0.79
TM9SF1-202ENST00000396854 UBE2L6O14933 153 aa10.14□□□□□ -0.79
TM9SF1-202ENST00000396854 COPS9Q8WXC6 57 aa10.13□□□□□ -0.79
TM9SF1-202ENST00000396854 ZNF625Q96I27 306 aaPredicted RBP10.13□□□□□ -0.79
TM9SF1-202ENST00000396854 PLECQ15149 4684 aaKnown RBP10.13□□□□□ -0.79
TM9SF1-202ENST00000396854 TRAV13-1A0A0B4J241 112 aa10.13□□□□□ -0.79
TM9SF1-202ENST00000396854 C3orf84H3BNL1 204 aa10.12□□□□□ -0.79
TM9SF1-202ENST00000396854 CCL18P55774 89 aa10.12□□□□□ -0.79
TM9SF1-202ENST00000396854 CKS1BP61024 79 aa10.12□□□□□ -0.79
TM9SF1-202ENST00000396854 C2orf82Q6UX34 121 aa10.12□□□□□ -0.79
TM9SF1-202ENST00000396854 UBE2WQ96B02 151 aa10.12□□□□□ -0.79
TM9SF1-202ENST00000396854 CLEC2BQ92478 149 aa10.11□□□□□ -0.79
TM9SF1-202ENST00000396854 PPDPFQ9H3Y8 114 aa10.11□□□□□ -0.79
TM9SF1-202ENST00000396854 LINC00588Q9Y4M8 146 aa10.11□□□□□ -0.79
TM9SF1-202ENST00000396854 TEX49A0A1B0GTD5 131 aa10.11□□□□□ -0.79
TM9SF1-202ENST00000396854 HERV-K104P63124 156 aa10.11□□□□□ -0.79
TM9SF1-202ENST00000396854 CHCHD5Q9BSY4 110 aa10.11□□□□□ -0.79
TM9SF1-202ENST00000396854 CASC10Q5T4H9 136 aa10.1□□□□□ -0.79
TM9SF1-202ENST00000396854 UPK3BQ9BT76 320 aa10.1□□□□□ -0.79
TM9SF1-202ENST00000396854 SOSTDC1Q6X4U4 206 aa10.09□□□□□ -0.79
TM9SF1-202ENST00000396854 GAGE6Q13070 117 aa10.08□□□□□ -0.8
TM9SF1-202ENST00000396854 WFDC10BQ8IUB3 73 aa10.08□□□□□ -0.8
TM9SF1-202ENST00000396854 TENM2Q9NT68 2774 aa10.08□□□□□ -0.8
TM9SF1-202ENST00000396854 LYSTQ99698 3801 aa10.08□□□□□ -0.8
TM9SF1-202ENST00000396854 TRAV8-4A0A0B4J246 113 aa10.07□□□□□ -0.8
TM9SF1-202ENST00000396854 A0A1B0GUV1 79 aa10.07□□□□□ -0.8
TM9SF1-202ENST00000396854 MEIG1Q5JSS6 88 aa10.07□□□□□ -0.8
TM9SF1-202ENST00000396854 COX7A2LO14548 114 aa10.06□□□□□ -0.8
TM9SF1-202ENST00000396854 A0A0U1RRA0 63 aa10.05□□□□□ -0.8
TM9SF1-202ENST00000396854 DNAH10OSP0CZ25 163 aa10.05□□□□□ -0.8
TM9SF1-202ENST00000396854 UBE2DNLQ8IWF7 75 aa10.05□□□□□ -0.8
TM9SF1-202ENST00000396854 IGLV4-60A0A075B6I1 120 aa10.04□□□□□ -0.8
TM9SF1-202ENST00000396854 LINC01556Q5JQF7 62 aa10.04□□□□□ -0.8
TM9SF1-202ENST00000396854 FAM240AA0A1B0GVK7 77 aa10.03□□□□□ -0.8
TM9SF1-202ENST00000396854 Q8N3U1 123 aa10.03□□□□□ -0.8
TM9SF1-202ENST00000396854 SNCGO76070 127 aa10.03□□□□□ -0.8
TM9SF1-202ENST00000396854 COX7B2Q8TF08 81 aa10.03□□□□□ -0.8
TM9SF1-202ENST00000396854 Q6Q795 121 aa10.01□□□□□ -0.81
TM9SF1-202ENST00000396854 TRACP01848 142 aa10□□□□□ -0.81
TM9SF1-202ENST00000396854 VPS13DQ5THJ4 4388 aa10□□□□□ -0.81
TM9SF1-202ENST00000396854 DNAH1Q9P2D7 4330 aa10□□□□□ -0.81
TM9SF1-202ENST00000396854 IGHV3OR16-9A0A0B4J2B5 98 aa9.99□□□□□ -0.81
TM9SF1-202ENST00000396854 ANGP03950 147 aaKnown RBP9.99□□□□□ -0.81
TM9SF1-202ENST00000396854 GAGE2BQ13066 116 aa9.99□□□□□ -0.81
TM9SF1-202ENST00000396854 GAGE2EQ4V326 116 aa9.99□□□□□ -0.81
TM9SF1-202ENST00000396854 GAGE2DQ9UEU5 116 aa9.99□□□□□ -0.81
TM9SF1-202ENST00000396854 TRAV13-2A0A0B4J235 113 aa9.98□□□□□ -0.81
TM9SF1-202ENST00000396854 PRR34Q9NV39 138 aa9.98□□□□□ -0.81
TM9SF1-202ENST00000396854 A0A087WZ39 114 aa9.97□□□□□ -0.81
TM9SF1-202ENST00000396854 MIR7-3HGQ8N6C7 128 aa9.97□□□□□ -0.81
TM9SF1-202ENST00000396854 LINC00476Q8WZB0 136 aa9.97□□□□□ -0.81
TM9SF1-202ENST00000396854 ANAPC13Q9BS18 74 aa9.97□□□□□ -0.81
TM9SF1-202ENST00000396854 KLK12Q9UKR0 248 aa9.97□□□□□ -0.81
TM9SF1-202ENST00000396854 ALMS1Q8TCU4 4167 aa9.97□□□□□ -0.81
TM9SF1-202ENST00000396854 LINC00959A0A1B0GUT2 108 aa9.97□□□□□ -0.81
TM9SF1-202ENST00000396854 RPL28P46779 137 aaKnown RBP9.97□□□□□ -0.81
TM9SF1-202ENST00000396854 LINC00269Q8N2A0 174 aa9.97□□□□□ -0.81
TM9SF1-202ENST00000396854 CRPP02741 224 aa9.96□□□□□ -0.81
TM9SF1-202ENST00000396854 REG3AQ06141 175 aa9.96□□□□□ -0.81
TM9SF1-202ENST00000396854 TOMM7Q9P0U1 55 aa9.96□□□□□ -0.81
TM9SF1-202ENST00000396854 IGKV3OR2-268A0A0C4DH90 116 aa9.95□□□□□ -0.82
TM9SF1-202ENST00000396854 IBA57-AS1B1ANH7 110 aa9.95□□□□□ -0.82
TM9SF1-202ENST00000396854 IGKV2-28A0A075B6P5 120 aa9.95□□□□□ -0.82
TM9SF1-202ENST00000396854 IGKV2D-28P01615 120 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms