RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 H3BUT2 72 aa11.84□□□□□ -0.51
TNFSF13-205ENST00000396545 CCL18P55774 89 aa11.84□□□□□ -0.51
TNFSF13-205ENST00000396545 LITAFQ99732 161 aa11.84□□□□□ -0.51
TNFSF13-205ENST00000396545 C16orf90A8MZG2 172 aa11.83□□□□□ -0.52
TNFSF13-205ENST00000396545 TMEM238C9JI98 176 aa11.83□□□□□ -0.52
TNFSF13-205ENST00000396545 NDUFA1O15239 70 aa11.83□□□□□ -0.52
TNFSF13-205ENST00000396545 CCL25O15444 150 aa11.83□□□□□ -0.52
TNFSF13-205ENST00000396545 LYPD5Q6UWN5 251 aa11.83□□□□□ -0.52
TNFSF13-205ENST00000396545 CDK2AP2O75956 126 aa11.82□□□□□ -0.52
TNFSF13-205ENST00000396545 A0A1W2PPM0 123 aa11.81□□□□□ -0.52
TNFSF13-205ENST00000396545 TMEM262E9PQX1 116 aa11.81□□□□□ -0.52
TNFSF13-205ENST00000396545 TIMM17BO60830 172 aa11.81□□□□□ -0.52
TNFSF13-205ENST00000396545 RBX1P62877 108 aa11.81□□□□□ -0.52
TNFSF13-205ENST00000396545 NAA38Q9BRA0 125 aaKnown RBP11.8□□□□□ -0.52
TNFSF13-205ENST00000396545 SPANXDQ9BXN6 97 aa11.8□□□□□ -0.52
TNFSF13-205ENST00000396545 SPANXCQ9NY87 97 aa11.8□□□□□ -0.52
TNFSF13-205ENST00000396545 IGHV3OR16-9A0A0B4J2B5 98 aa11.79□□□□□ -0.52
TNFSF13-205ENST00000396545 LINC00959A0A1B0GUT2 108 aa11.79□□□□□ -0.52
TNFSF13-205ENST00000396545 KRTAP1-5Q9BYS1 174 aa11.78□□□□□ -0.52
TNFSF13-205ENST00000396545 Q9H8V8 135 aa11.78□□□□□ -0.52
TNFSF13-205ENST00000396545 DNAH5Q8TE73 4624 aa11.77□□□□□ -0.52
TNFSF13-205ENST00000396545 K7EP34 96 aa11.77□□□□□ -0.53
TNFSF13-205ENST00000396545 ZNF625Q96I27 306 aaPredicted RBP11.77□□□□□ -0.53
TNFSF13-205ENST00000396545 APOBP04114 4563 aaKnown RBP11.77□□□□□ -0.53
TNFSF13-205ENST00000396545 MUSTN1Q8IVN3 82 aa11.76□□□□□ -0.53
TNFSF13-205ENST00000396545 A0A087WZ39 114 aa11.75□□□□□ -0.53
TNFSF13-205ENST00000396545 IGKV3OR2-268A0A0C4DH90 116 aa11.75□□□□□ -0.53
TNFSF13-205ENST00000396545 GAGE10A6NGK3 116 aa11.75□□□□□ -0.53
TNFSF13-205ENST00000396545 CFC1BP0CG36 223 aa11.75□□□□□ -0.53
TNFSF13-205ENST00000396545 CFC1P0CG37 223 aa11.75□□□□□ -0.53
TNFSF13-205ENST00000396545 FABP2P12104 132 aa11.75□□□□□ -0.53
TNFSF13-205ENST00000396545 RPL24P83731 157 aaKnown RBP11.75□□□□□ -0.53
TNFSF13-205ENST00000396545 MIAQ16674 131 aa11.75□□□□□ -0.53
TNFSF13-205ENST00000396545 TTC32Q5I0X7 151 aa11.75□□□□□ -0.53
TNFSF13-205ENST00000396545 ADAMTSL4-AS1Q5T5F5 129 aa11.75□□□□□ -0.53
TNFSF13-205ENST00000396545 GTF2H5Q6ZYL4 71 aa11.75□□□□□ -0.53
TNFSF13-205ENST00000396545 UPK3BQ9BT76 320 aa11.75□□□□□ -0.53
TNFSF13-205ENST00000396545 A4D1N5 150 aa11.74□□□□□ -0.53
TNFSF13-205ENST00000396545 HERV-K104P63124 156 aa11.74□□□□□ -0.53
TNFSF13-205ENST00000396545 ESRGQ1W209 222 aa11.74□□□□□ -0.53
TNFSF13-205ENST00000396545 SPCS1Q9Y6A9 102 aa11.74□□□□□ -0.53
TNFSF13-205ENST00000396545 A0A0B4J2C4 111 aa11.73□□□□□ -0.53
TNFSF13-205ENST00000396545 SS18Q15532 418 aa11.73□□□□□ -0.53
TNFSF13-205ENST00000396545 LINC01561Q8N1V8 128 aa11.73□□□□□ -0.53
TNFSF13-205ENST00000396545 APOMO95445 188 aa11.72□□□□□ -0.53
TNFSF13-205ENST00000396545 PGPEP1Q9NXJ5 209 aa11.72□□□□□ -0.53
TNFSF13-205ENST00000396545 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.71□□□□□ -0.53
TNFSF13-205ENST00000396545 EIF4EBP3O60516 100 aaPredicted RBP11.71□□□□□ -0.53
TNFSF13-205ENST00000396545 IFITM1P13164 125 aa11.71□□□□□ -0.53
TNFSF13-205ENST00000396545 COX7B2Q8TF08 81 aa11.71□□□□□ -0.53
TNFSF13-205ENST00000396545 TSPAN13O95857 204 aa11.71□□□□□ -0.54
TNFSF13-205ENST00000396545 ANGP03950 147 aaKnown RBP11.71□□□□□ -0.54
TNFSF13-205ENST00000396545 CIRBPQ14011 172 aaKnown RBP11.71□□□□□ -0.54
TNFSF13-205ENST00000396545 KRTAP10-2P60368 255 aa11.7□□□□□ -0.54
TNFSF13-205ENST00000396545 PRO1854Q9UHT4 67 aa11.7□□□□□ -0.54
TNFSF13-205ENST00000396545 Q8N1X5 172 aa11.69□□□□□ -0.54
TNFSF13-205ENST00000396545 LINC00269Q8N2A0 174 aa11.69□□□□□ -0.54
TNFSF13-205ENST00000396545 REG3AQ06141 175 aa11.68□□□□□ -0.54
TNFSF13-205ENST00000396545 LINC01556Q5JQF7 62 aa11.68□□□□□ -0.54
TNFSF13-205ENST00000396545 C5orf38Q86SI9 138 aa11.68□□□□□ -0.54
TNFSF13-205ENST00000396545 Q8N3U1 123 aa11.68□□□□□ -0.54
TNFSF13-205ENST00000396545 PPDPFQ9H3Y8 114 aa11.68□□□□□ -0.54
TNFSF13-205ENST00000396545 PRR34Q9NV39 138 aa11.68□□□□□ -0.54
TNFSF13-205ENST00000396545 PRSS2P07478 247 aa11.67□□□□□ -0.54
TNFSF13-205ENST00000396545 XCL1P47992 114 aa11.67□□□□□ -0.54
TNFSF13-205ENST00000396545 CLPSL2Q6UWE3 100 aa11.67□□□□□ -0.54
TNFSF13-205ENST00000396545 CD164L2Q6UWJ8 174 aa11.67□□□□□ -0.54
TNFSF13-205ENST00000396545 WFDC10BQ8IUB3 73 aa11.67□□□□□ -0.54
TNFSF13-205ENST00000396545 TRAV8-4A0A0B4J246 113 aa11.66□□□□□ -0.54
TNFSF13-205ENST00000396545 IGHV3-33P01772 117 aa11.66□□□□□ -0.54
TNFSF13-205ENST00000396545 DNAH10OSP0CZ25 163 aa11.66□□□□□ -0.54
TNFSF13-205ENST00000396545 SFTA2Q6UW10 78 aa11.66□□□□□ -0.54
TNFSF13-205ENST00000396545 Q6ZRN7 208 aaPredicted RBP11.65□□□□□ -0.54
TNFSF13-205ENST00000396545 LINC00308Q8TCZ7 52 aa11.65□□□□□ -0.54
TNFSF13-205ENST00000396545 CRPP02741 224 aa11.64□□□□□ -0.55
TNFSF13-205ENST00000396545 MEIG1Q5JSS6 88 aa11.64□□□□□ -0.55
TNFSF13-205ENST00000396545 DAND5Q8N907 189 aa11.64□□□□□ -0.55
TNFSF13-205ENST00000396545 CHCHD10Q8WYQ3 142 aaPredicted RBP11.64□□□□□ -0.55
TNFSF13-205ENST00000396545 TOMM7Q9P0U1 55 aa11.64□□□□□ -0.55
TNFSF13-205ENST00000396545 KLK12Q9UKR0 248 aa11.64□□□□□ -0.55
TNFSF13-205ENST00000396545 Q8IZM0 81 aa11.63□□□□□ -0.55
TNFSF13-205ENST00000396545 COPS9Q8WXC6 57 aa11.63□□□□□ -0.55
TNFSF13-205ENST00000396545 NPC2P61916 151 aa11.62□□□□□ -0.55
TNFSF13-205ENST00000396545 LYRM7Q5U5X0 104 aa11.62□□□□□ -0.55
TNFSF13-205ENST00000396545 SOSTDC1Q6X4U4 206 aa11.62□□□□□ -0.55
TNFSF13-205ENST00000396545 ERG28Q9UKR5 140 aa11.62□□□□□ -0.55
TNFSF13-205ENST00000396545 COX7A2LO14548 114 aa11.61□□□□□ -0.55
TNFSF13-205ENST00000396545 FOXI1Q12951 378 aa11.61□□□□□ -0.55
TNFSF13-205ENST00000396545 IBA57-AS1B1ANH7 110 aa11.6□□□□□ -0.55
TNFSF13-205ENST00000396545 ENHOQ6UWT2 76 aa11.6□□□□□ -0.55
TNFSF13-205ENST00000396545 A0A0U1RRA0 63 aa11.58□□□□□ -0.55
TNFSF13-205ENST00000396545 KIAA0087Q14695 138 aa11.58□□□□□ -0.55
TNFSF13-205ENST00000396545 C6orf226Q5I0X4 101 aa11.58□□□□□ -0.55
TNFSF13-205ENST00000396545 UBE2WQ96B02 151 aa11.58□□□□□ -0.55
TNFSF13-205ENST00000396545 HERC1Q15751 4861 aa11.58□□□□□ -0.56
TNFSF13-205ENST00000396545 IGLV10-54A0A075B6I4 117 aa11.58□□□□□ -0.56
TNFSF13-205ENST00000396545 LOC107984156A0A0G2JMH3 177 aa11.58□□□□□ -0.56
TNFSF13-205ENST00000396545 ARL17AQ8IVW1 177 aa11.58□□□□□ -0.56
TNFSF13-205ENST00000396545 H3BMG7 143 aa11.57□□□□□ -0.56
TNFSF13-205ENST00000396545 TRBV20-1A0A075B6N2 111 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms