RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 ATXN8Q156A1 80 aa10.23□□□□□ -0.77
CBX3-202ENST00000396386 ETDBQ3ZM63 59 aa10.23□□□□□ -0.77
CBX3-202ENST00000396386 C6orf226Q5I0X4 101 aa10.23□□□□□ -0.77
CBX3-202ENST00000396386 MIR7-3HGQ8N6C7 128 aa10.23□□□□□ -0.77
CBX3-202ENST00000396386 COX6CP09669 75 aa10.23□□□□□ -0.77
CBX3-202ENST00000396386 SMCPP49901 116 aaPredicted RBP10.23□□□□□ -0.77
CBX3-202ENST00000396386 LINC00158P58513 81 aa10.23□□□□□ -0.77
CBX3-202ENST00000396386 Q6ZTC4 211 aa10.23□□□□□ -0.77
CBX3-202ENST00000396386 IGLV10-54A0A075B6I4 117 aa10.22□□□□□ -0.77
CBX3-202ENST00000396386 LYPD5Q6UWN5 251 aa10.22□□□□□ -0.77
CBX3-202ENST00000396386 VPS25Q9BRG1 176 aa10.22□□□□□ -0.77
CBX3-202ENST00000396386 CBY1Q9Y3M2 126 aa10.22□□□□□ -0.77
CBX3-202ENST00000396386 KPRPQ5T749 579 aaPredicted RBP10.21□□□□□ -0.77
CBX3-202ENST00000396386 A0A0J9YWU9 116 aa10.21□□□□□ -0.78
CBX3-202ENST00000396386 MALP21145 153 aa10.2□□□□□ -0.78
CBX3-202ENST00000396386 CXCL5P42830 114 aa10.2□□□□□ -0.78
CBX3-202ENST00000396386 FOXI1Q12951 378 aa10.19□□□□□ -0.78
CBX3-202ENST00000396386 CFAP161Q6P656 301 aa10.19□□□□□ -0.78
CBX3-202ENST00000396386 C9JAW5 83 aa10.19□□□□□ -0.78
CBX3-202ENST00000396386 J3QR89 54 aa10.19□□□□□ -0.78
CBX3-202ENST00000396386 PFN2P35080 140 aa10.19□□□□□ -0.78
CBX3-202ENST00000396386 CKS1BP61024 79 aa10.19□□□□□ -0.78
CBX3-202ENST00000396386 LINC01620Q4KN68 170 aa10.19□□□□□ -0.78
CBX3-202ENST00000396386 SND1-IT1Q9HBX3 110 aa10.19□□□□□ -0.78
CBX3-202ENST00000396386 PRR34Q9NV39 138 aa10.19□□□□□ -0.78
CBX3-202ENST00000396386 KLK12Q9UKR0 248 aa10.19□□□□□ -0.78
CBX3-202ENST00000396386 CRPP02741 224 aa10.18□□□□□ -0.78
CBX3-202ENST00000396386 M0QXV9 152 aa10.17□□□□□ -0.78
CBX3-202ENST00000396386 SLC25A20O43772 301 aa10.17□□□□□ -0.78
CBX3-202ENST00000396386 NANOS2P60321 138 aaKnown RBP10.17□□□□□ -0.78
CBX3-202ENST00000396386 C11orf45Q8TAV5 145 aa10.17□□□□□ -0.78
CBX3-202ENST00000396386 TRAV13-2A0A0B4J235 113 aa10.17□□□□□ -0.78
CBX3-202ENST00000396386 GAGE12HA6NDE8 117 aa10.17□□□□□ -0.78
CBX3-202ENST00000396386 KIAA0087Q14695 138 aa10.17□□□□□ -0.78
CBX3-202ENST00000396386 C2orf82Q6UX34 121 aa10.17□□□□□ -0.78
CBX3-202ENST00000396386 TEN1Q86WV5 123 aa10.17□□□□□ -0.78
CBX3-202ENST00000396386 CCL18P55774 89 aa10.16□□□□□ -0.78
CBX3-202ENST00000396386 SPATA25Q9BR10 227 aa10.16□□□□□ -0.78
CBX3-202ENST00000396386 DEFB131BA0A096LNP1 70 aa10.15□□□□□ -0.78
CBX3-202ENST00000396386 WFDC10BQ8IUB3 73 aa10.15□□□□□ -0.78
CBX3-202ENST00000396386 CLEC2BQ92478 149 aa10.15□□□□□ -0.78
CBX3-202ENST00000396386 LST1O00453 97 aa10.15□□□□□ -0.79
CBX3-202ENST00000396386 ENHOQ6UWT2 76 aa10.15□□□□□ -0.79
CBX3-202ENST00000396386 ANKRD29Q8N6D5 301 aa10.14□□□□□ -0.79
CBX3-202ENST00000396386 KLK5Q9Y337 293 aaPredicted RBP10.14□□□□□ -0.79
CBX3-202ENST00000396386 CMYA5Q8N3K9 4069 aa10.14□□□□□ -0.79
CBX3-202ENST00000396386 IGKV2-28A0A075B6P5 120 aa10.13□□□□□ -0.79
CBX3-202ENST00000396386 TRBV10-2A0A0K0K1G8 114 aa10.13□□□□□ -0.79
CBX3-202ENST00000396386 IGKV2D-28P01615 120 aa10.13□□□□□ -0.79
CBX3-202ENST00000396386 SPAG11BQ08648 103 aa10.13□□□□□ -0.79
CBX3-202ENST00000396386 PPDPFLQ8WWR9 84 aa10.13□□□□□ -0.79
CBX3-202ENST00000396386 TRAV8-4A0A0B4J246 113 aa10.13□□□□□ -0.79
CBX3-202ENST00000396386 PRB2P02812 416 aaPredicted RBP10.13□□□□□ -0.79
CBX3-202ENST00000396386 COX17Q14061 63 aa10.13□□□□□ -0.79
CBX3-202ENST00000396386 LINC00337Q8N6G1 96 aa10.13□□□□□ -0.79
CBX3-202ENST00000396386 UBE2WQ96B02 151 aa10.13□□□□□ -0.79
CBX3-202ENST00000396386 LINC01600Q96MT4 127 aa10.12□□□□□ -0.79
CBX3-202ENST00000396386 TM2D3Q9BRN9 247 aa10.12□□□□□ -0.79
CBX3-202ENST00000396386 K7EIL1 84 aa10.11□□□□□ -0.79
CBX3-202ENST00000396386 DNAH3Q8TD57 4116 aa10.11□□□□□ -0.79
CBX3-202ENST00000396386 ESRGQ1W209 222 aa10.1□□□□□ -0.79
CBX3-202ENST00000396386 H3BT86 120 aa10.1□□□□□ -0.79
CBX3-202ENST00000396386 RPL28P46779 137 aaKnown RBP10.1□□□□□ -0.79
CBX3-202ENST00000396386 PKD1L1Q8TDX9 2849 aa10.09□□□□□ -0.79
CBX3-202ENST00000396386 TRAV10A0A0B4J240 114 aa10.08□□□□□ -0.8
CBX3-202ENST00000396386 CARD19Q96LW7 228 aa10.08□□□□□ -0.8
CBX3-202ENST00000396386 DEFB121Q5J5C9 76 aa10.07□□□□□ -0.8
CBX3-202ENST00000396386 MEGF8Q7Z7M0 2845 aa10.07□□□□□ -0.8
CBX3-202ENST00000396386 MGAM2Q2M2H8 2515 aa10.06□□□□□ -0.8
CBX3-202ENST00000396386 LINC01556Q5JQF7 62 aa10.06□□□□□ -0.8
CBX3-202ENST00000396386 C6orf223Q8N319 242 aa10.06□□□□□ -0.8
CBX3-202ENST00000396386 MUC7Q8TAX7 377 aa10.06□□□□□ -0.8
CBX3-202ENST00000396386 C9orf116Q5BN46 136 aaPredicted RBP10.06□□□□□ -0.8
CBX3-202ENST00000396386 C15orf53Q8NAA6 179 aa10.06□□□□□ -0.8
CBX3-202ENST00000396386 SMIM11BQ8TCY0 68 aa10.06□□□□□ -0.8
CBX3-202ENST00000396386 MRAPQ8TCY5 172 aa10.06□□□□□ -0.8
CBX3-202ENST00000396386 NTN5Q8WTR8 489 aaPredicted RBP10.06□□□□□ -0.8
CBX3-202ENST00000396386 TENM3Q9P273 2699 aa10.05□□□□□ -0.8
CBX3-202ENST00000396386 TRACP01848 142 aa10.05□□□□□ -0.8
CBX3-202ENST00000396386 UNQ6190/PRO20217Q6UXQ8 127 aa10.05□□□□□ -0.8
CBX3-202ENST00000396386 OR13C6PQ8NH95 151 aa10.05□□□□□ -0.8
CBX3-202ENST00000396386 NDUFC2O95298 119 aa10.04□□□□□ -0.8
CBX3-202ENST00000396386 C10orf25Q5T742 122 aa10.04□□□□□ -0.8
CBX3-202ENST00000396386 LINC00526Q96FQ7 95 aa10.04□□□□□ -0.8
CBX3-202ENST00000396386 GVQW2A0A096LPI5 108 aaPredicted RBP10.03□□□□□ -0.8
CBX3-202ENST00000396386 KRTAP26-1Q6PEX3 210 aa10.03□□□□□ -0.8
CBX3-202ENST00000396386 FAM218AQ96MZ4 157 aa10.02□□□□□ -0.81
CBX3-202ENST00000396386 C1orf43Q9BWL3 253 aa10.02□□□□□ -0.81
CBX3-202ENST00000396386 DNAH10OSP0CZ25 163 aa10.01□□□□□ -0.81
CBX3-202ENST00000396386 H0YGX0 51 aa10□□□□□ -0.81
CBX3-202ENST00000396386 TEX49A0A1B0GTD5 131 aa10□□□□□ -0.81
CBX3-202ENST00000396386 ZNF561-AS1K7EIQ3 104 aa10□□□□□ -0.81
CBX3-202ENST00000396386 C6orf48Q9UBA6 75 aa10□□□□□ -0.81
CBX3-202ENST00000396386 HIGD2BQ4VC39 106 aa9.99□□□□□ -0.81
CBX3-202ENST00000396386 C15orf56Q8N910 161 aa9.98□□□□□ -0.81
CBX3-202ENST00000396386 IGKV2D-24A0A075B6R9 120 aa9.98□□□□□ -0.81
CBX3-202ENST00000396386 CAMK2N2Q96S95 79 aa9.98□□□□□ -0.81
CBX3-202ENST00000396386 NCR3O14931 201 aa9.97□□□□□ -0.81
CBX3-202ENST00000396386 PCP4P48539 62 aa9.97□□□□□ -0.81
CBX3-202ENST00000396386 PRR3P79522 188 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms