RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 A0A096LNT2 108 aa11.61□□□□□ -0.55
SCN3B-202ENST00000392770 A0A087WYN8 130 aa11.61□□□□□ -0.55
SCN3B-202ENST00000392770 M0QXV9 152 aa11.61□□□□□ -0.55
SCN3B-202ENST00000392770 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.61□□□□□ -0.55
SCN3B-202ENST00000392770 LINC01561Q8N1V8 128 aa11.61□□□□□ -0.55
SCN3B-202ENST00000392770 NDUFV3P56181 108 aaKnown RBP11.6□□□□□ -0.55
SCN3B-202ENST00000392770 X6R8D5 127 aa11.6□□□□□ -0.55
SCN3B-202ENST00000392770 AGRNO00468 2067 aa11.6□□□□□ -0.55
SCN3B-202ENST00000392770 CHD9Q3L8U1 2897 aa11.6□□□□□ -0.55
SCN3B-202ENST00000392770 MRPL55Q7Z7F7 128 aaKnown RBP11.59□□□□□ -0.55
SCN3B-202ENST00000392770 Q8N814 137 aa11.59□□□□□ -0.55
SCN3B-202ENST00000392770 ZNF706Q9Y5V0 76 aaPredicted RBP11.58□□□□□ -0.56
SCN3B-202ENST00000392770 A0A0U1RQV1 116 aa11.58□□□□□ -0.56
SCN3B-202ENST00000392770 Q9UF83 564 aa11.57□□□□□ -0.56
SCN3B-202ENST00000392770 SPTBN4Q9H254 2564 aa11.57□□□□□ -0.56
SCN3B-202ENST00000392770 NDUFC2-KCTD14E9PQ53 114 aa11.57□□□□□ -0.56
SCN3B-202ENST00000392770 C2orf48Q96LS8 159 aa11.56□□□□□ -0.56
SCN3B-202ENST00000392770 ABCA2Q9BZC7 2435 aa11.56□□□□□ -0.56
SCN3B-202ENST00000392770 F8WDY8 70 aa11.56□□□□□ -0.56
SCN3B-202ENST00000392770 V9GYY9 64 aa11.55□□□□□ -0.56
SCN3B-202ENST00000392770 ZNF462Q96JM2 2506 aa11.55□□□□□ -0.56
SCN3B-202ENST00000392770 REG3GQ6UW15 175 aa11.55□□□□□ -0.56
SCN3B-202ENST00000392770 SPTSSBQ8NFR3 76 aa11.55□□□□□ -0.56
SCN3B-202ENST00000392770 CHD8Q9HCK8 2581 aa11.55□□□□□ -0.56
SCN3B-202ENST00000392770 IGLV5-39A0A0G2JS06 123 aa11.55□□□□□ -0.56
SCN3B-202ENST00000392770 HRCT1Q6UXD1 115 aa11.54□□□□□ -0.56
SCN3B-202ENST00000392770 SEC61GP60059 68 aa11.54□□□□□ -0.56
SCN3B-202ENST00000392770 Q6ZRU5 148 aa11.53□□□□□ -0.56
SCN3B-202ENST00000392770 IGLV9-49A0A0B4J1Y8 123 aa11.53□□□□□ -0.56
SCN3B-202ENST00000392770 ESRGQ1W209 222 aa11.52□□□□□ -0.57
SCN3B-202ENST00000392770 SBSPONQ8IVN8 264 aa11.51□□□□□ -0.57
SCN3B-202ENST00000392770 MPLKIPQ8TAP9 179 aa11.51□□□□□ -0.57
SCN3B-202ENST00000392770 NHLRC4P0CG21 123 aaPredicted RBP11.51□□□□□ -0.57
SCN3B-202ENST00000392770 IGLV5-52A0A0A0MRZ9 124 aa11.51□□□□□ -0.57
SCN3B-202ENST00000392770 BRCA2P51587 3418 aa11.5□□□□□ -0.57
SCN3B-202ENST00000392770 IGHV3OR16-9A0A0B4J2B5 98 aa11.5□□□□□ -0.57
SCN3B-202ENST00000392770 XGP55808 180 aa11.49□□□□□ -0.57
SCN3B-202ENST00000392770 IGKV4-1P06312 121 aa11.49□□□□□ -0.57
SCN3B-202ENST00000392770 LINC01556Q5JQF7 62 aa11.48□□□□□ -0.57
SCN3B-202ENST00000392770 LINC00337Q8N6G1 96 aa11.48□□□□□ -0.57
SCN3B-202ENST00000392770 Q8NAQ8 132 aa11.47□□□□□ -0.57
SCN3B-202ENST00000392770 IGLV5-45A0A087WSX0 123 aa11.47□□□□□ -0.57
SCN3B-202ENST00000392770 UQCRQO14949 82 aa11.47□□□□□ -0.57
SCN3B-202ENST00000392770 C20orf197Q8N268 126 aa11.46□□□□□ -0.57
SCN3B-202ENST00000392770 C10orf25Q5T742 122 aa11.46□□□□□ -0.57
SCN3B-202ENST00000392770 Q8N3U1 123 aa11.45□□□□□ -0.58
SCN3B-202ENST00000392770 C3orf22Q8N5N4 141 aa11.45□□□□□ -0.58
SCN3B-202ENST00000392770 IMUPQ9GZP8 106 aa11.45□□□□□ -0.58
SCN3B-202ENST00000392770 MYO18BQ8IUG5 2567 aa11.45□□□□□ -0.58
SCN3B-202ENST00000392770 H3BNG1 76 aa11.45□□□□□ -0.58
SCN3B-202ENST00000392770 C1orf134Q5TEV5 83 aa11.45□□□□□ -0.58
SCN3B-202ENST00000392770 A8MTW9 85 aa11.44□□□□□ -0.58
SCN3B-202ENST00000392770 Q6JHZ5 121 aa11.44□□□□□ -0.58
SCN3B-202ENST00000392770 PRYO14603 147 aa11.44□□□□□ -0.58
SCN3B-202ENST00000392770 CASC2Q6XLA1 102 aa11.44□□□□□ -0.58
SCN3B-202ENST00000392770 MKI67P46013 3256 aaKnown RBP11.43□□□□□ -0.58
SCN3B-202ENST00000392770 SPINK6Q6UWN8 80 aa11.43□□□□□ -0.58
SCN3B-202ENST00000392770 KRTAP1-3Q8IUG1 177 aa11.43□□□□□ -0.58
SCN3B-202ENST00000392770 FAM240AA0A1B0GVK7 77 aa11.42□□□□□ -0.58
SCN3B-202ENST00000392770 FAM236DA0A1B0GTK5 79 aa11.42□□□□□ -0.58
SCN3B-202ENST00000392770 FAM236CP0DP71 79 aa11.42□□□□□ -0.58
SCN3B-202ENST00000392770 KRTAP10-3P60369 221 aa11.42□□□□□ -0.58
SCN3B-202ENST00000392770 LINC00575Q6W349 94 aa11.42□□□□□ -0.58
SCN3B-202ENST00000392770 MDFIQ99750 246 aa11.41□□□□□ -0.58
SCN3B-202ENST00000392770 WFDC13Q8IUB5 93 aa11.41□□□□□ -0.58
SCN3B-202ENST00000392770 C1orf137Q5JT78 98 aa11.41□□□□□ -0.58
SCN3B-202ENST00000392770 ANKRD17O75179 2603 aaKnown RBP11.41□□□□□ -0.58
SCN3B-202ENST00000392770 PKD1L2Q7Z442 2459 aa11.41□□□□□ -0.58
SCN3B-202ENST00000392770 MYO9AB2RTY4 2548 aa11.4□□□□□ -0.58
SCN3B-202ENST00000392770 CSNK1G2-AS1Q8NCQ2 148 aa11.4□□□□□ -0.58
SCN3B-202ENST00000392770 C6orf48Q9UBA6 75 aa11.39□□□□□ -0.59
SCN3B-202ENST00000392770 ABCA12Q86UK0 2595 aa11.39□□□□□ -0.59
SCN3B-202ENST00000392770 USP9XQ93008 2570 aaPredicted RBP11.38□□□□□ -0.59
SCN3B-202ENST00000392770 DOPEY1Q5JWR5 2465 aa11.38□□□□□ -0.59
SCN3B-202ENST00000392770 TRANK1O15050 2925 aa11.37□□□□□ -0.59
SCN3B-202ENST00000392770 C22orf24Q9Y442 160 aa11.37□□□□□ -0.59
SCN3B-202ENST00000392770 SERP2Q8N6R1 65 aa11.36□□□□□ -0.59
SCN3B-202ENST00000392770 LRRK2Q5S007 2527 aa11.36□□□□□ -0.59
SCN3B-202ENST00000392770 Q9BRP9 147 aa11.36□□□□□ -0.59
SCN3B-202ENST00000392770 SOSTDC1Q6X4U4 206 aa11.35□□□□□ -0.59
SCN3B-202ENST00000392770 RANBP2P49792 3224 aaKnown RBP11.35□□□□□ -0.59
SCN3B-202ENST00000392770 C2CD3Q4AC94 2353 aa11.35□□□□□ -0.59
SCN3B-202ENST00000392770 KRTAP10-11P60412 298 aa11.34□□□□□ -0.59
SCN3B-202ENST00000392770 C1orf195Q5TG92 126 aa11.33□□□□□ -0.6
SCN3B-202ENST00000392770 FAM30AQ9NZY2 134 aa11.33□□□□□ -0.6
SCN3B-202ENST00000392770 SNURFQ9Y675 71 aa11.33□□□□□ -0.6
SCN3B-202ENST00000392770 PRLHP81277 87 aa11.33□□□□□ -0.6
SCN3B-202ENST00000392770 TLN2Q9Y4G6 2542 aa11.33□□□□□ -0.6
SCN3B-202ENST00000392770 LAMA3Q16787 3333 aa11.32□□□□□ -0.6
SCN3B-202ENST00000392770 Q6Q795 121 aa11.32□□□□□ -0.6
SCN3B-202ENST00000392770 LINC00588Q9Y4M8 146 aa11.32□□□□□ -0.6
SCN3B-202ENST00000392770 CCDC179H3BU77 68 aa11.31□□□□□ -0.6
SCN3B-202ENST00000392770 CIRBP-AS1Q8TBR5 109 aa11.31□□□□□ -0.6
SCN3B-202ENST00000392770 FAM19A3Q7Z5A8 133 aa11.3□□□□□ -0.6
SCN3B-202ENST00000392770 KRTAP1-1Q07627 177 aa11.3□□□□□ -0.6
SCN3B-202ENST00000392770 USP9YO00507 2555 aaPredicted RBP11.29□□□□□ -0.6
SCN3B-202ENST00000392770 A0A087WVE0 104 aa11.29□□□□□ -0.6
SCN3B-202ENST00000392770 C19orf73Q9NVV2 129 aa11.29□□□□□ -0.6
SCN3B-202ENST00000392770 GIG44P09565 113 aaPredicted RBP11.29□□□□□ -0.6
SCN3B-202ENST00000392770 COX7CP15954 63 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms