RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 PRO0461Q9UI25 63 aa13.7□□□□□ -0.22
PTPN11-202ENST00000392597 TENM3Q9P273 2699 aa13.7□□□□□ -0.22
PTPN11-202ENST00000392597 C6orf226Q5I0X4 101 aa13.7□□□□□ -0.22
PTPN11-202ENST00000392597 SOSTDC1Q6X4U4 206 aa13.7□□□□□ -0.22
PTPN11-202ENST00000392597 PRR34Q9NV39 138 aa13.7□□□□□ -0.22
PTPN11-202ENST00000392597 H7C2G1 150 aa13.69□□□□□ -0.22
PTPN11-202ENST00000392597 K7ERU9 68 aa13.68□□□□□ -0.22
PTPN11-202ENST00000392597 TCL1BO95988 128 aa13.68□□□□□ -0.22
PTPN11-202ENST00000392597 C11orf45Q8TAV5 145 aa13.68□□□□□ -0.22
PTPN11-202ENST00000392597 SPATA25Q9BR10 227 aa13.68□□□□□ -0.22
PTPN11-202ENST00000392597 WFDC2Q14508 124 aa13.66□□□□□ -0.22
PTPN11-202ENST00000392597 RPL13AP40429 203 aaKnown RBP13.65□□□□□ -0.22
PTPN11-202ENST00000392597 CXCL5P42830 114 aa13.65□□□□□ -0.22
PTPN11-202ENST00000392597 FOXI1Q12951 378 aa13.65□□□□□ -0.22
PTPN11-202ENST00000392597 MIR7-3HGQ8N6C7 128 aa13.65□□□□□ -0.22
PTPN11-202ENST00000392597 MRAPQ8TCY5 172 aa13.65□□□□□ -0.22
PTPN11-202ENST00000392597 TM2D3Q9BRN9 247 aa13.65□□□□□ -0.22
PTPN11-202ENST00000392597 MEGF8Q7Z7M0 2845 aa13.65□□□□□ -0.22
PTPN11-202ENST00000392597 DEFB131BA0A096LNP1 70 aa13.65□□□□□ -0.22
PTPN11-202ENST00000392597 LINC00158P58513 81 aa13.65□□□□□ -0.22
PTPN11-202ENST00000392597 NANOS2P60321 138 aaKnown RBP13.65□□□□□ -0.22
PTPN11-202ENST00000392597 DEFB121Q5J5C9 76 aa13.65□□□□□ -0.22
PTPN11-202ENST00000392597 IGLV10-54A0A075B6I4 117 aa13.64□□□□□ -0.23
PTPN11-202ENST00000392597 TRIAP1O43715 76 aa13.64□□□□□ -0.23
PTPN11-202ENST00000392597 KLK12Q9UKR0 248 aa13.64□□□□□ -0.23
PTPN11-202ENST00000392597 PRKDCP78527 4128 aaKnown RBP13.63□□□□□ -0.23
PTPN11-202ENST00000392597 COX6CP09669 75 aa13.63□□□□□ -0.23
PTPN11-202ENST00000392597 MALP21145 153 aa13.63□□□□□ -0.23
PTPN11-202ENST00000392597 KIAA0087Q14695 138 aa13.63□□□□□ -0.23
PTPN11-202ENST00000392597 TRAV8-4A0A0B4J246 113 aa13.61□□□□□ -0.23
PTPN11-202ENST00000392597 CKS1BP61024 79 aa13.61□□□□□ -0.23
PTPN11-202ENST00000392597 CFAP161Q6P656 301 aa13.61□□□□□ -0.23
PTPN11-202ENST00000392597 ENHOQ6UWT2 76 aa13.61□□□□□ -0.23
PTPN11-202ENST00000392597 ATXN8Q156A1 80 aa13.61□□□□□ -0.23
PTPN11-202ENST00000392597 KLK5Q9Y337 293 aaPredicted RBP13.61□□□□□ -0.23
PTPN11-202ENST00000392597 GAGE12HA6NDE8 117 aa13.59□□□□□ -0.23
PTPN11-202ENST00000392597 MTURNQ8N3F0 131 aa13.59□□□□□ -0.23
PTPN11-202ENST00000392597 CRPP02741 224 aa13.59□□□□□ -0.23
PTPN11-202ENST00000392597 WFDC10BQ8IUB3 73 aa13.59□□□□□ -0.23
PTPN11-202ENST00000392597 SND1-IT1Q9HBX3 110 aa13.59□□□□□ -0.23
PTPN11-202ENST00000392597 TRAV13-2A0A0B4J235 113 aa13.58□□□□□ -0.24
PTPN11-202ENST00000392597 PFN2P35080 140 aa13.58□□□□□ -0.24
PTPN11-202ENST00000392597 SMCPP49901 116 aaPredicted RBP13.58□□□□□ -0.24
PTPN11-202ENST00000392597 COX17Q14061 63 aa13.58□□□□□ -0.24
PTPN11-202ENST00000392597 ESRGQ1W209 222 aa13.58□□□□□ -0.24
PTPN11-202ENST00000392597 C2orf82Q6UX34 121 aa13.58□□□□□ -0.24
PTPN11-202ENST00000392597 CCL18P55774 89 aa13.57□□□□□ -0.24
PTPN11-202ENST00000392597 ETDBQ3ZM63 59 aa13.57□□□□□ -0.24
PTPN11-202ENST00000392597 TRAV10A0A0B4J240 114 aa13.57□□□□□ -0.24
PTPN11-202ENST00000392597 M0QXV9 152 aa13.57□□□□□ -0.24
PTPN11-202ENST00000392597 FBN3Q75N90 2809 aa13.56□□□□□ -0.24
PTPN11-202ENST00000392597 UBE2WQ96B02 151 aa13.55□□□□□ -0.24
PTPN11-202ENST00000392597 B9D2Q9BPU9 175 aa13.55□□□□□ -0.24
PTPN11-202ENST00000392597 DNAH9Q9NYC9 4486 aa13.55□□□□□ -0.24
PTPN11-202ENST00000392597 C15orf53Q8NAA6 179 aa13.55□□□□□ -0.24
PTPN11-202ENST00000392597 LINC01620Q4KN68 170 aa13.54□□□□□ -0.24
PTPN11-202ENST00000392597 LINC01556Q5JQF7 62 aa13.53□□□□□ -0.24
PTPN11-202ENST00000392597 IGKV2-28A0A075B6P5 120 aa13.53□□□□□ -0.24
PTPN11-202ENST00000392597 IGKV2D-28P01615 120 aa13.53□□□□□ -0.24
PTPN11-202ENST00000392597 SPAG11BQ08648 103 aa13.53□□□□□ -0.24
PTPN11-202ENST00000392597 LINC01600Q96MT4 127 aa13.53□□□□□ -0.24
PTPN11-202ENST00000392597 HUWE1Q7Z6Z7 4374 aaKnown RBP13.52□□□□□ -0.25
PTPN11-202ENST00000392597 C9JAW5 83 aa13.52□□□□□ -0.25
PTPN11-202ENST00000392597 J3QR89 54 aa13.52□□□□□ -0.25
PTPN11-202ENST00000392597 SLC25A20O43772 301 aa13.52□□□□□ -0.25
PTPN11-202ENST00000392597 RNF151Q2KHN1 245 aa13.52□□□□□ -0.25
PTPN11-202ENST00000392597 MUC7Q8TAX7 377 aa13.52□□□□□ -0.25
PTPN11-202ENST00000392597 LST1O00453 97 aa13.51□□□□□ -0.25
PTPN11-202ENST00000392597 LINC00337Q8N6G1 96 aa13.5□□□□□ -0.25
PTPN11-202ENST00000392597 TEN1Q86WV5 123 aa13.5□□□□□ -0.25
PTPN11-202ENST00000392597 RPL28P46779 137 aaKnown RBP13.48□□□□□ -0.25
PTPN11-202ENST00000392597 TRBV10-2A0A0K0K1G8 114 aa13.48□□□□□ -0.25
PTPN11-202ENST00000392597 KRTAP26-1Q6PEX3 210 aa13.48□□□□□ -0.25
PTPN11-202ENST00000392597 CLEC2BQ92478 149 aa13.48□□□□□ -0.25
PTPN11-202ENST00000392597 VPS25Q9BRG1 176 aa13.47□□□□□ -0.25
PTPN11-202ENST00000392597 CBY1Q9Y3M2 126 aa13.47□□□□□ -0.25
PTPN11-202ENST00000392597 GVQW2A0A096LPI5 108 aaPredicted RBP13.46□□□□□ -0.25
PTPN11-202ENST00000392597 DNAH10OSP0CZ25 163 aa13.46□□□□□ -0.25
PTPN11-202ENST00000392597 ANKRD29Q8N6D5 301 aa13.46□□□□□ -0.25
PTPN11-202ENST00000392597 NDUFC2O95298 119 aa13.46□□□□□ -0.26
PTPN11-202ENST00000392597 NHLRC4P0CG21 123 aaPredicted RBP13.46□□□□□ -0.26
PTPN11-202ENST00000392597 UNQ6190/PRO20217Q6UXQ8 127 aa13.45□□□□□ -0.26
PTPN11-202ENST00000392597 PPDPFLQ8WWR9 84 aa13.45□□□□□ -0.26
PTPN11-202ENST00000392597 C6orf223Q8N319 242 aa13.44□□□□□ -0.26
PTPN11-202ENST00000392597 NTN5Q8WTR8 489 aaPredicted RBP13.44□□□□□ -0.26
PTPN11-202ENST00000392597 H3BT86 120 aa13.44□□□□□ -0.26
PTPN11-202ENST00000392597 C10orf25Q5T742 122 aa13.44□□□□□ -0.26
PTPN11-202ENST00000392597 COL7A1Q02388 2944 aa13.43□□□□□ -0.26
PTPN11-202ENST00000392597 C9orf116Q5BN46 136 aaPredicted RBP13.43□□□□□ -0.26
PTPN11-202ENST00000392597 C1orf43Q9BWL3 253 aa13.43□□□□□ -0.26
PTPN11-202ENST00000392597 SMIM11BQ8TCY0 68 aa13.41□□□□□ -0.26
PTPN11-202ENST00000392597 TRACP01848 142 aa13.4□□□□□ -0.26
PTPN11-202ENST00000392597 LINC00526Q96FQ7 95 aa13.4□□□□□ -0.26
PTPN11-202ENST00000392597 LINC00588Q9Y4M8 146 aa13.4□□□□□ -0.26
PTPN11-202ENST00000392597 ZNF561-AS1K7EIQ3 104 aa13.39□□□□□ -0.27
PTPN11-202ENST00000392597 CARD19Q96LW7 228 aa13.39□□□□□ -0.27
PTPN11-202ENST00000392597 H0YGX0 51 aa13.38□□□□□ -0.27
PTPN11-202ENST00000392597 OR13C6PQ8NH95 151 aa13.38□□□□□ -0.27
PTPN11-202ENST00000392597 C2orf48Q96LS8 159 aa13.38□□□□□ -0.27
PTPN11-202ENST00000392597 STAB2Q8WWQ8 2551 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 154.4 ms