RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 CHCHD10Q8WYQ3 142 aaPredicted RBP13.07□□□□□ -0.32
ERCC2-203ENST00000391944 VPS25Q9BRG1 176 aa13.07□□□□□ -0.32
ERCC2-203ENST00000391944 COX6CP09669 75 aa13.06□□□□□ -0.32
ERCC2-203ENST00000391944 ATXN8Q156A1 80 aa13.06□□□□□ -0.32
ERCC2-203ENST00000391944 LYPD5Q6UWN5 251 aa13.06□□□□□ -0.32
ERCC2-203ENST00000391944 LINC00158P58513 81 aa13.05□□□□□ -0.32
ERCC2-203ENST00000391944 COX7A2LO14548 114 aa13.05□□□□□ -0.32
ERCC2-203ENST00000391944 COL6A5A8TX70 2615 aa13.04□□□□□ -0.32
ERCC2-203ENST00000391944 Q6ZTC4 211 aa13.04□□□□□ -0.32
ERCC2-203ENST00000391944 IGLV10-54A0A075B6I4 117 aa13.03□□□□□ -0.32
ERCC2-203ENST00000391944 KPRPQ5T749 579 aaPredicted RBP13.02□□□□□ -0.32
ERCC2-203ENST00000391944 C9JAW5 83 aa13.02□□□□□ -0.33
ERCC2-203ENST00000391944 PRR34Q9NV39 138 aa13.02□□□□□ -0.33
ERCC2-203ENST00000391944 J3QR89 54 aa13.01□□□□□ -0.33
ERCC2-203ENST00000391944 LINC01620Q4KN68 170 aa13.01□□□□□ -0.33
ERCC2-203ENST00000391944 SLC25A20O43772 301 aa13.01□□□□□ -0.33
ERCC2-203ENST00000391944 PFN2P35080 140 aa13.01□□□□□ -0.33
ERCC2-203ENST00000391944 KIAA0087Q14695 138 aa13.01□□□□□ -0.33
ERCC2-203ENST00000391944 M0QXV9 152 aa13□□□□□ -0.33
ERCC2-203ENST00000391944 FOXI1Q12951 378 aa13□□□□□ -0.33
ERCC2-203ENST00000391944 A0A0J9YWU9 116 aa13□□□□□ -0.33
ERCC2-203ENST00000391944 SND1-IT1Q9HBX3 110 aa13□□□□□ -0.33
ERCC2-203ENST00000391944 MALP21145 153 aa12.99□□□□□ -0.33
ERCC2-203ENST00000391944 CCL18P55774 89 aa12.99□□□□□ -0.33
ERCC2-203ENST00000391944 C2orf82Q6UX34 121 aa12.99□□□□□ -0.33
ERCC2-203ENST00000391944 TEN1Q86WV5 123 aa12.99□□□□□ -0.33
ERCC2-203ENST00000391944 KLK12Q9UKR0 248 aa12.99□□□□□ -0.33
ERCC2-203ENST00000391944 TENM3Q9P273 2699 aa12.99□□□□□ -0.33
ERCC2-203ENST00000391944 CKS1BP61024 79 aa12.99□□□□□ -0.33
ERCC2-203ENST00000391944 TRAV13-2A0A0B4J235 113 aa12.97□□□□□ -0.33
ERCC2-203ENST00000391944 CXCL5P42830 114 aa12.97□□□□□ -0.33
ERCC2-203ENST00000391944 CLEC2BQ92478 149 aa12.97□□□□□ -0.33
ERCC2-203ENST00000391944 LINC01600Q96MT4 127 aa12.97□□□□□ -0.33
ERCC2-203ENST00000391944 NOTCH1P46531 2555 aa12.97□□□□□ -0.33
ERCC2-203ENST00000391944 IGKV2-28A0A075B6P5 120 aa12.96□□□□□ -0.33
ERCC2-203ENST00000391944 LST1O00453 97 aa12.96□□□□□ -0.33
ERCC2-203ENST00000391944 IGKV2D-28P01615 120 aa12.96□□□□□ -0.33
ERCC2-203ENST00000391944 CFAP161Q6P656 301 aa12.96□□□□□ -0.33
ERCC2-203ENST00000391944 ENHOQ6UWT2 76 aa12.96□□□□□ -0.33
ERCC2-203ENST00000391944 GAGE12HA6NDE8 117 aa12.96□□□□□ -0.34
ERCC2-203ENST00000391944 C11orf45Q8TAV5 145 aa12.96□□□□□ -0.34
ERCC2-203ENST00000391944 NANOS2P60321 138 aaKnown RBP12.95□□□□□ -0.34
ERCC2-203ENST00000391944 ANKRD29Q8N6D5 301 aa12.95□□□□□ -0.34
ERCC2-203ENST00000391944 TRBV10-2A0A0K0K1G8 114 aa12.95□□□□□ -0.34
ERCC2-203ENST00000391944 KLK5Q9Y337 293 aaPredicted RBP12.95□□□□□ -0.34
ERCC2-203ENST00000391944 CRPP02741 224 aa12.94□□□□□ -0.34
ERCC2-203ENST00000391944 LINC00337Q8N6G1 96 aa12.94□□□□□ -0.34
ERCC2-203ENST00000391944 PPDPFLQ8WWR9 84 aa12.94□□□□□ -0.34
ERCC2-203ENST00000391944 CARD19Q96LW7 228 aa12.94□□□□□ -0.34
ERCC2-203ENST00000391944 DEFB131BA0A096LNP1 70 aa12.93□□□□□ -0.34
ERCC2-203ENST00000391944 COX17Q14061 63 aa12.93□□□□□ -0.34
ERCC2-203ENST00000391944 WFDC10BQ8IUB3 73 aa12.93□□□□□ -0.34
ERCC2-203ENST00000391944 NBEAL1Q6ZS30 2694 aa12.91□□□□□ -0.34
ERCC2-203ENST00000391944 TRAV8-4A0A0B4J246 113 aa12.91□□□□□ -0.34
ERCC2-203ENST00000391944 RPL28P46779 137 aaKnown RBP12.91□□□□□ -0.34
ERCC2-203ENST00000391944 ESRGQ1W209 222 aa12.91□□□□□ -0.34
ERCC2-203ENST00000391944 UBE2WQ96B02 151 aa12.9□□□□□ -0.34
ERCC2-203ENST00000391944 PRB2P02812 416 aaPredicted RBP12.9□□□□□ -0.34
ERCC2-203ENST00000391944 SPATA25Q9BR10 227 aa12.89□□□□□ -0.35
ERCC2-203ENST00000391944 H3BT86 120 aa12.88□□□□□ -0.35
ERCC2-203ENST00000391944 SPAG11BQ08648 103 aa12.88□□□□□ -0.35
ERCC2-203ENST00000391944 TM2D3Q9BRN9 247 aa12.88□□□□□ -0.35
ERCC2-203ENST00000391944 K7EIL1 84 aa12.87□□□□□ -0.35
ERCC2-203ENST00000391944 C9orf116Q5BN46 136 aaPredicted RBP12.86□□□□□ -0.35
ERCC2-203ENST00000391944 C6orf223Q8N319 242 aa12.86□□□□□ -0.35
ERCC2-203ENST00000391944 NTN5Q8WTR8 489 aaPredicted RBP12.86□□□□□ -0.35
ERCC2-203ENST00000391944 SMIM11BQ8TCY0 68 aa12.85□□□□□ -0.35
ERCC2-203ENST00000391944 UNQ6190/PRO20217Q6UXQ8 127 aa12.85□□□□□ -0.35
ERCC2-203ENST00000391944 C10orf25Q5T742 122 aa12.84□□□□□ -0.35
ERCC2-203ENST00000391944 NDUFC2O95298 119 aa12.83□□□□□ -0.36
ERCC2-203ENST00000391944 TRACP01848 142 aa12.83□□□□□ -0.36
ERCC2-203ENST00000391944 DEFB121Q5J5C9 76 aa12.83□□□□□ -0.36
ERCC2-203ENST00000391944 KRTAP26-1Q6PEX3 210 aa12.83□□□□□ -0.36
ERCC2-203ENST00000391944 LINC00526Q96FQ7 95 aa12.83□□□□□ -0.36
ERCC2-203ENST00000391944 LINC01556Q5JQF7 62 aa12.82□□□□□ -0.36
ERCC2-203ENST00000391944 MUC7Q8TAX7 377 aa12.82□□□□□ -0.36
ERCC2-203ENST00000391944 TRAV10A0A0B4J240 114 aa12.82□□□□□ -0.36
ERCC2-203ENST00000391944 OR13C6PQ8NH95 151 aa12.82□□□□□ -0.36
ERCC2-203ENST00000391944 MRAPQ8TCY5 172 aa12.82□□□□□ -0.36
ERCC2-203ENST00000391944 FAM218AQ96MZ4 157 aa12.82□□□□□ -0.36
ERCC2-203ENST00000391944 PCP4P48539 62 aa12.8□□□□□ -0.36
ERCC2-203ENST00000391944 TEX49A0A1B0GTD5 131 aa12.8□□□□□ -0.36
ERCC2-203ENST00000391944 GVQW2A0A096LPI5 108 aaPredicted RBP12.79□□□□□ -0.36
ERCC2-203ENST00000391944 H0YGX0 51 aa12.79□□□□□ -0.36
ERCC2-203ENST00000391944 C15orf53Q8NAA6 179 aa12.78□□□□□ -0.36
ERCC2-203ENST00000391944 PRR3P79522 188 aaKnown RBP12.78□□□□□ -0.36
ERCC2-203ENST00000391944 SIGMAR1Q99720 223 aa12.77□□□□□ -0.36
ERCC2-203ENST00000391944 HUWE1Q7Z6Z7 4374 aaKnown RBP12.77□□□□□ -0.37
ERCC2-203ENST00000391944 CDIP1Q9H305 208 aa12.77□□□□□ -0.37
ERCC2-203ENST00000391944 MGAM2Q2M2H8 2515 aa12.77□□□□□ -0.37
ERCC2-203ENST00000391944 DNAH10OSP0CZ25 163 aa12.76□□□□□ -0.37
ERCC2-203ENST00000391944 C6orf48Q9UBA6 75 aa12.75□□□□□ -0.37
ERCC2-203ENST00000391944 C1orf43Q9BWL3 253 aa12.74□□□□□ -0.37
ERCC2-203ENST00000391944 ZNF561-AS1K7EIQ3 104 aa12.74□□□□□ -0.37
ERCC2-203ENST00000391944 Q8NDZ9 215 aa12.74□□□□□ -0.37
ERCC2-203ENST00000391944 TMEM126AQ9H061 195 aa12.74□□□□□ -0.37
ERCC2-203ENST00000391944 BAALC-AS2P0C853 105 aa12.73□□□□□ -0.37
ERCC2-203ENST00000391944 A0A087WYN8 130 aa12.72□□□□□ -0.37
ERCC2-203ENST00000391944 HIGD2BQ4VC39 106 aa12.72□□□□□ -0.37
ERCC2-203ENST00000391944 C15orf56Q8N910 161 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms