RNA–Protein interactions for RNA: ENST00000382227.7

TMEM41A-202, Transcript of transmembrane protein 41A, humanhuman

TSL 4

Gene TMEM41A, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-202ENST00000382227 NUPR1O60356 82 aa11.17□□□□□ -0.62
TMEM41A-202ENST00000382227 HERVK_113P63121 156 aa11.17□□□□□ -0.62
TMEM41A-202ENST00000382227 PRR4Q16378 134 aa11.17□□□□□ -0.62
TMEM41A-202ENST00000382227 LBHQ53QV2 105 aaPredicted RBP11.17□□□□□ -0.62
TMEM41A-202ENST00000382227 PAPPA-AS1Q5QFB9 102 aa11.17□□□□□ -0.62
TMEM41A-202ENST00000382227 NXT2Q9NPJ8 142 aaKnown RBP11.17□□□□□ -0.62
TMEM41A-202ENST00000382227 CDKN2A-AS1Q9UH64 79 aa11.17□□□□□ -0.62
TMEM41A-202ENST00000382227 F8VRH5 84 aa11.16□□□□□ -0.62
TMEM41A-202ENST00000382227 GEMIN7Q9H840 131 aaKnown RBP11.15□□□□□ -0.62
TMEM41A-202ENST00000382227 G0S2P27469 103 aa11.14□□□□□ -0.63
TMEM41A-202ENST00000382227 CTDSP1Q9GZU7 261 aa11.14□□□□□ -0.63
TMEM41A-202ENST00000382227 MRPL55Q7Z7F7 128 aaKnown RBP11.13□□□□□ -0.63
TMEM41A-202ENST00000382227 TIMM17AQ99595 171 aa11.13□□□□□ -0.63
TMEM41A-202ENST00000382227 TP73-AS1Q9UF72 201 aa11.13□□□□□ -0.63
TMEM41A-202ENST00000382227 CXCL5P42830 114 aa11.12□□□□□ -0.63
TMEM41A-202ENST00000382227 TOMM6Q96B49 74 aa11.12□□□□□ -0.63
TMEM41A-202ENST00000382227 RPL28P46779 137 aaKnown RBP11.11□□□□□ -0.63
TMEM41A-202ENST00000382227 BCE1O60756 84 aa11.1□□□□□ -0.63
TMEM41A-202ENST00000382227 SMIM1B2RUZ4 78 aa11.09□□□□□ -0.63
TMEM41A-202ENST00000382227 ERASQ7Z444 233 aa11.09□□□□□ -0.63
TMEM41A-202ENST00000382227 TSPAN13O95857 204 aa11.08□□□□□ -0.64
TMEM41A-202ENST00000382227 SCGB3A1Q96QR1 104 aa11.08□□□□□ -0.64
TMEM41A-202ENST00000382227 A0A087X002 238 aa11.07□□□□□ -0.64
TMEM41A-202ENST00000382227 KIAA1644Q3SXP7 199 aa11.07□□□□□ -0.64
TMEM41A-202ENST00000382227 PDZD11Q5EBL8 140 aa11.07□□□□□ -0.64
TMEM41A-202ENST00000382227 LINC00167Q96N53 147 aa11.07□□□□□ -0.64
TMEM41A-202ENST00000382227 TINCRA0A1B0GVN0 87 aa11.06□□□□□ -0.64
TMEM41A-202ENST00000382227 RPL37AP8A6NKH3 93 aa11.06□□□□□ -0.64
TMEM41A-202ENST00000382227 CRYGAP11844 174 aa11.06□□□□□ -0.64
TMEM41A-202ENST00000382227 RAB14P61106 215 aa11.06□□□□□ -0.64
TMEM41A-202ENST00000382227 COX7B2Q8TF08 81 aa11.06□□□□□ -0.64
TMEM41A-202ENST00000382227 ADCYAP1P18509 176 aa11.05□□□□□ -0.64
TMEM41A-202ENST00000382227 IGLV5-45A0A087WSX0 123 aa11.04□□□□□ -0.64
TMEM41A-202ENST00000382227 TYMSOSQ8TAI1 123 aa11.04□□□□□ -0.64
TMEM41A-202ENST00000382227 GAGE10A6NGK3 116 aa11.03□□□□□ -0.64
TMEM41A-202ENST00000382227 LINC01549A6NIU2 74 aa11.02□□□□□ -0.65
TMEM41A-202ENST00000382227 CST9LQ9H4G1 147 aa11.02□□□□□ -0.65
TMEM41A-202ENST00000382227 IGLV5-37A0A075B6J1 123 aa11.01□□□□□ -0.65
TMEM41A-202ENST00000382227 RAB5BP61020 215 aa11.01□□□□□ -0.65
TMEM41A-202ENST00000382227 MUC2Q02817 5179 aa11□□□□□ -0.65
TMEM41A-202ENST00000382227 LINC01546A6NGU7 62 aa11□□□□□ -0.65
TMEM41A-202ENST00000382227 SPINK8P0C7L1 97 aa11□□□□□ -0.65
TMEM41A-202ENST00000382227 NKAPP1Q8N9T2 125 aa11□□□□□ -0.65
TMEM41A-202ENST00000382227 ANAPC11Q9NYG5 84 aa11□□□□□ -0.65
TMEM41A-202ENST00000382227 TRAV9-1A0A075B6T8 112 aa10.99□□□□□ -0.65
TMEM41A-202ENST00000382227 KRTAP13-1Q8IUC0 172 aa10.99□□□□□ -0.65
TMEM41A-202ENST00000382227 A0A0U1RQV1 116 aa10.98□□□□□ -0.65
TMEM41A-202ENST00000382227 UBE2AP49459 152 aa10.98□□□□□ -0.65
TMEM41A-202ENST00000382227 PMVKQ15126 192 aa10.98□□□□□ -0.65
TMEM41A-202ENST00000382227 MRPL18Q9H0U6 180 aaKnown RBP10.98□□□□□ -0.65
TMEM41A-202ENST00000382227 KRTAP13-2Q52LG2 175 aa10.97□□□□□ -0.65
TMEM41A-202ENST00000382227 GNB1LQ9BYB4 327 aa10.97□□□□□ -0.65
TMEM41A-202ENST00000382227 ATP5LO75964 103 aa10.96□□□□□ -0.65
TMEM41A-202ENST00000382227 H3BRM9 83 aa10.95□□□□□ -0.66
TMEM41A-202ENST00000382227 FAM229BQ4G0N7 80 aa10.95□□□□□ -0.66
TMEM41A-202ENST00000382227 CLLU1Q5K131 121 aa10.95□□□□□ -0.66
TMEM41A-202ENST00000382227 IGKV2-28A0A075B6P5 120 aa10.94□□□□□ -0.66
TMEM41A-202ENST00000382227 SCO1O75880 301 aa10.94□□□□□ -0.66
TMEM41A-202ENST00000382227 IGKV2D-28P01615 120 aa10.94□□□□□ -0.66
TMEM41A-202ENST00000382227 TMEM218A2RU14 115 aa10.93□□□□□ -0.66
TMEM41A-202ENST00000382227 S100PP25815 95 aa10.93□□□□□ -0.66
TMEM41A-202ENST00000382227 PFN2P35080 140 aa10.93□□□□□ -0.66
TMEM41A-202ENST00000382227 FA2HQ7L5A8 372 aa10.93□□□□□ -0.66
TMEM41A-202ENST00000382227 UQCC3Q6UW78 93 aa10.92□□□□□ -0.66
TMEM41A-202ENST00000382227 SMCO4Q9NRQ5 59 aa10.92□□□□□ -0.66
TMEM41A-202ENST00000382227 IGLV5-39A0A0G2JS06 123 aa10.91□□□□□ -0.66
TMEM41A-202ENST00000382227 IGLC3P0DOY3 106 aa10.91□□□□□ -0.66
TMEM41A-202ENST00000382227 LINC00304Q8N9R0 145 aa10.91□□□□□ -0.66
TMEM41A-202ENST00000382227 PRLHP81277 87 aa10.9□□□□□ -0.66
TMEM41A-202ENST00000382227 COX19Q49B96 90 aa10.9□□□□□ -0.66
TMEM41A-202ENST00000382227 RETNLBQ9BQ08 111 aa10.9□□□□□ -0.66
TMEM41A-202ENST00000382227 IGKV2D-26A0A0A0MRZ7 120 aa10.89□□□□□ -0.67
TMEM41A-202ENST00000382227 VPREB1P12018 145 aa10.89□□□□□ -0.67
TMEM41A-202ENST00000382227 SND1-IT1Q9HBX3 110 aa10.89□□□□□ -0.67
TMEM41A-202ENST00000382227 FABP9Q0Z7S8 132 aa10.88□□□□□ -0.67
TMEM41A-202ENST00000382227 FAM19A1Q7Z5A9 133 aa10.88□□□□□ -0.67
TMEM41A-202ENST00000382227 TMEM126AQ9H061 195 aa10.88□□□□□ -0.67
TMEM41A-202ENST00000382227 ERG28Q9UKR5 140 aa10.88□□□□□ -0.67
TMEM41A-202ENST00000382227 TMEM238C9JI98 176 aa10.87□□□□□ -0.67
TMEM41A-202ENST00000382227 ZNF22P17026 224 aaPredicted RBP10.87□□□□□ -0.67
TMEM41A-202ENST00000382227 NDUFA6P56556 154 aa10.87□□□□□ -0.67
TMEM41A-202ENST00000382227 RPL24P83731 157 aaKnown RBP10.87□□□□□ -0.67
TMEM41A-202ENST00000382227 SEC11CQ9BY50 192 aa10.87□□□□□ -0.67
TMEM41A-202ENST00000382227 A0A096LNJ9 63 aa10.86□□□□□ -0.67
TMEM41A-202ENST00000382227 COX17Q14061 63 aa10.86□□□□□ -0.67
TMEM41A-202ENST00000382227 M0R378 163 aa10.84□□□□□ -0.67
TMEM41A-202ENST00000382227 CTAG1AP78358 180 aa10.84□□□□□ -0.67
TMEM41A-202ENST00000382227 ZNF625Q96I27 306 aaPredicted RBP10.84□□□□□ -0.67
TMEM41A-202ENST00000382227 TPRXLQ17RH7 258 aa10.83□□□□□ -0.68
TMEM41A-202ENST00000382227 Q8NDZ9 215 aa10.83□□□□□ -0.68
TMEM41A-202ENST00000382227 PLEKHB2Q96CS7 222 aa10.83□□□□□ -0.68
TMEM41A-202ENST00000382227 URB1-AS1Q96HZ7 61 aa10.82□□□□□ -0.68
TMEM41A-202ENST00000382227 CDIP1Q9H305 208 aa10.82□□□□□ -0.68
TMEM41A-202ENST00000382227 IGLV7-46A0A075B6I9 117 aa10.81□□□□□ -0.68
TMEM41A-202ENST00000382227 SFTA2Q6UW10 78 aa10.81□□□□□ -0.68
TMEM41A-202ENST00000382227 C11orf86A6NJI1 115 aa10.8□□□□□ -0.68
TMEM41A-202ENST00000382227 HBDP02042 147 aa10.8□□□□□ -0.68
TMEM41A-202ENST00000382227 LINC00614P0C842 121 aa10.8□□□□□ -0.68
TMEM41A-202ENST00000382227 LCE2AQ5TA79 106 aaPredicted RBP10.8□□□□□ -0.68
TMEM41A-202ENST00000382227 CBLN2Q8IUK8 224 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms