RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 C6orf226Q5I0X4 101 aa15.88■□□□□ 0.13
VPS16-201ENST00000380443 LINC00269Q8N2A0 174 aa15.88■□□□□ 0.13
VPS16-201ENST00000380443 REG3AQ06141 175 aa15.87■□□□□ 0.13
VPS16-201ENST00000380443 LINC01600Q96MT4 127 aa15.87■□□□□ 0.13
VPS16-201ENST00000380443 MGAM2Q2M2H8 2515 aa15.87■□□□□ 0.13
VPS16-201ENST00000380443 ANGP03950 147 aaKnown RBP15.87■□□□□ 0.13
VPS16-201ENST00000380443 COX7A2LO14548 114 aa15.85■□□□□ 0.13
VPS16-201ENST00000380443 CXCL5P42830 114 aa15.85■□□□□ 0.13
VPS16-201ENST00000380443 MTURNQ8N3F0 131 aa15.85■□□□□ 0.13
VPS16-201ENST00000380443 TRAV13-2A0A0B4J235 113 aa15.84■□□□□ 0.13
VPS16-201ENST00000380443 LINC00158P58513 81 aa15.84■□□□□ 0.13
VPS16-201ENST00000380443 MIR7-3HGQ8N6C7 128 aa15.84■□□□□ 0.13
VPS16-201ENST00000380443 CMYA5Q8N3K9 4069 aa15.84■□□□□ 0.13
VPS16-201ENST00000380443 TEN1Q86WV5 123 aa15.84■□□□□ 0.13
VPS16-201ENST00000380443 CHCHD10Q8WYQ3 142 aaPredicted RBP15.84■□□□□ 0.13
VPS16-201ENST00000380443 NBEAL2Q6ZNJ1 2754 aa15.83■□□□□ 0.12
VPS16-201ENST00000380443 LINC01620Q4KN68 170 aa15.83■□□□□ 0.12
VPS16-201ENST00000380443 SLC25A20O43772 301 aa15.82■□□□□ 0.12
VPS16-201ENST00000380443 CLPSL2Q6UWE3 100 aa15.82■□□□□ 0.12
VPS16-201ENST00000380443 NBEAL1Q6ZS30 2694 aa15.81■□□□□ 0.12
VPS16-201ENST00000380443 C9JAW5 83 aa15.81■□□□□ 0.12
VPS16-201ENST00000380443 LYPD5Q6UWN5 251 aa15.81■□□□□ 0.12
VPS16-201ENST00000380443 FBN3Q75N90 2809 aa15.81■□□□□ 0.12
VPS16-201ENST00000380443 FOXI1Q12951 378 aa15.8■□□□□ 0.12
VPS16-201ENST00000380443 PPDPFLQ8WWR9 84 aa15.8■□□□□ 0.12
VPS16-201ENST00000380443 PRR34Q9NV39 138 aa15.8■□□□□ 0.12
VPS16-201ENST00000380443 TRBV10-2A0A0K0K1G8 114 aa15.79■□□□□ 0.12
VPS16-201ENST00000380443 LST1O00453 97 aa15.78■□□□□ 0.12
VPS16-201ENST00000380443 MALP21145 153 aa15.78■□□□□ 0.12
VPS16-201ENST00000380443 CKS1BP61024 79 aa15.78■□□□□ 0.12
VPS16-201ENST00000380443 CFAP161Q6P656 301 aa15.78■□□□□ 0.12
VPS16-201ENST00000380443 SND1-IT1Q9HBX3 110 aa15.78■□□□□ 0.12
VPS16-201ENST00000380443 RETNQ9HD89 108 aa15.78■□□□□ 0.12
VPS16-201ENST00000380443 COX17Q14061 63 aa15.78■□□□□ 0.12
VPS16-201ENST00000380443 ANKRD29Q8N6D5 301 aa15.77■□□□□ 0.11
VPS16-201ENST00000380443 CRPP02741 224 aa15.76■□□□□ 0.11
VPS16-201ENST00000380443 KPRPQ5T749 579 aaPredicted RBP15.76■□□□□ 0.11
VPS16-201ENST00000380443 CCL18P55774 89 aa15.75■□□□□ 0.11
VPS16-201ENST00000380443 KIAA0087Q14695 138 aa15.75■□□□□ 0.11
VPS16-201ENST00000380443 KLK5Q9Y337 293 aaPredicted RBP15.75■□□□□ 0.11
VPS16-201ENST00000380443 H3BT86 120 aa15.75■□□□□ 0.11
VPS16-201ENST00000380443 TRAV8-4A0A0B4J246 113 aa15.74■□□□□ 0.11
VPS16-201ENST00000380443 MUC7Q8TAX7 377 aa15.74■□□□□ 0.11
VPS16-201ENST00000380443 PFN2P35080 140 aa15.73■□□□□ 0.11
VPS16-201ENST00000380443 Q6ZTC4 211 aa15.73■□□□□ 0.11
VPS16-201ENST00000380443 Q8N3U1 123 aa15.73■□□□□ 0.11
VPS16-201ENST00000380443 RPL28P46779 137 aaKnown RBP15.72■□□□□ 0.11
VPS16-201ENST00000380443 IGLV10-54A0A075B6I4 117 aa15.71■□□□□ 0.11
VPS16-201ENST00000380443 KLK12Q9UKR0 248 aa15.71■□□□□ 0.1
VPS16-201ENST00000380443 GAGE12HA6NDE8 117 aa15.7■□□□□ 0.1
VPS16-201ENST00000380443 CLEC2BQ92478 149 aa15.7■□□□□ 0.1
VPS16-201ENST00000380443 IGKV2-28A0A075B6P5 120 aa15.69■□□□□ 0.1
VPS16-201ENST00000380443 IGKV2D-28P01615 120 aa15.69■□□□□ 0.1
VPS16-201ENST00000380443 C11orf45Q8TAV5 145 aa15.69■□□□□ 0.1
VPS16-201ENST00000380443 A0A0J9YWU9 116 aa15.68■□□□□ 0.1
VPS16-201ENST00000380443 ENHOQ6UWT2 76 aa15.68■□□□□ 0.1
VPS16-201ENST00000380443 CARD19Q96LW7 228 aa15.68■□□□□ 0.1
VPS16-201ENST00000380443 C2orf82Q6UX34 121 aa15.68■□□□□ 0.1
VPS16-201ENST00000380443 LINC00337Q8N6G1 96 aa15.68■□□□□ 0.1
VPS16-201ENST00000380443 SPATA25Q9BR10 227 aa15.68■□□□□ 0.1
VPS16-201ENST00000380443 NOTCH1P46531 2555 aa15.67■□□□□ 0.1
VPS16-201ENST00000380443 TRACP01848 142 aa15.66■□□□□ 0.1
VPS16-201ENST00000380443 NDUFC2O95298 119 aa15.66■□□□□ 0.1
VPS16-201ENST00000380443 MEGF8Q7Z7M0 2845 aa15.65■□□□□ 0.1
VPS16-201ENST00000380443 DEFB131BA0A096LNP1 70 aa15.64■□□□□ 0.09
VPS16-201ENST00000380443 SPAG11BQ08648 103 aa15.64■□□□□ 0.09
VPS16-201ENST00000380443 H0YGX0 51 aa15.63■□□□□ 0.09
VPS16-201ENST00000380443 DNAH3Q8TD57 4116 aa15.63■□□□□ 0.09
VPS16-201ENST00000380443 NANOS2P60321 138 aaKnown RBP15.61■□□□□ 0.09
VPS16-201ENST00000380443 NTN5Q8WTR8 489 aaPredicted RBP15.61■□□□□ 0.09
VPS16-201ENST00000380443 PRB2P02812 416 aaPredicted RBP15.61■□□□□ 0.09
VPS16-201ENST00000380443 UBE2WQ96B02 151 aa15.61■□□□□ 0.09
VPS16-201ENST00000380443 GVQW2A0A096LPI5 108 aaPredicted RBP15.6■□□□□ 0.09
VPS16-201ENST00000380443 WFDC10BQ8IUB3 73 aa15.6■□□□□ 0.09
VPS16-201ENST00000380443 SIGMAR1Q99720 223 aa15.6■□□□□ 0.09
VPS16-201ENST00000380443 ESRGQ1W209 222 aa15.59■□□□□ 0.09
VPS16-201ENST00000380443 TM2D3Q9BRN9 247 aa15.59■□□□□ 0.09
VPS16-201ENST00000380443 SMIM11BQ8TCY0 68 aa15.59■□□□□ 0.09
VPS16-201ENST00000380443 TRAV10A0A0B4J240 114 aa15.57■□□□□ 0.08
VPS16-201ENST00000380443 LINC01556Q5JQF7 62 aa15.57■□□□□ 0.08
VPS16-201ENST00000380443 C15orf53Q8NAA6 179 aa15.57■□□□□ 0.08
VPS16-201ENST00000380443 MRAPQ8TCY5 172 aa15.57■□□□□ 0.08
VPS16-201ENST00000380443 OR13C6PQ8NH95 151 aa15.55■□□□□ 0.08
VPS16-201ENST00000380443 DEFB121Q5J5C9 76 aa15.54■□□□□ 0.08
VPS16-201ENST00000380443 K7EIL1 84 aa15.53■□□□□ 0.08
VPS16-201ENST00000380443 UNQ6190/PRO20217Q6UXQ8 127 aa15.53■□□□□ 0.08
VPS16-201ENST00000380443 F8WDY8 70 aa15.52■□□□□ 0.07
VPS16-201ENST00000380443 KRTAP26-1Q6PEX3 210 aa15.52■□□□□ 0.07
VPS16-201ENST00000380443 TMEM126AQ9H061 195 aa15.52■□□□□ 0.07
VPS16-201ENST00000380443 TEX49A0A1B0GTD5 131 aa15.51■□□□□ 0.07
VPS16-201ENST00000380443 SCGB1A1P11684 91 aa15.5■□□□□ 0.07
VPS16-201ENST00000380443 C6orf223Q8N319 242 aa15.5■□□□□ 0.07
VPS16-201ENST00000380443 FAM218AQ96MZ4 157 aa15.5■□□□□ 0.07
VPS16-201ENST00000380443 CDIP1Q9H305 208 aa15.5■□□□□ 0.07
VPS16-201ENST00000380443 C9orf116Q5BN46 136 aaPredicted RBP15.5■□□□□ 0.07
VPS16-201ENST00000380443 DNAH10OSP0CZ25 163 aa15.49■□□□□ 0.07
VPS16-201ENST00000380443 C10orf25Q5T742 122 aa15.49■□□□□ 0.07
VPS16-201ENST00000380443 BAALC-AS2P0C853 105 aa15.48■□□□□ 0.07
VPS16-201ENST00000380443 C1orf43Q9BWL3 253 aa15.48■□□□□ 0.07
VPS16-201ENST00000380443 A0A1B0GX51 115 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms