RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 TRIAP1O43715 76 aa8.21□□□□□ -1.1
USP3-202ENST00000380324 PFN2P35080 140 aa8.21□□□□□ -1.1
USP3-202ENST00000380324 C6orf226Q5I0X4 101 aa8.21□□□□□ -1.1
USP3-202ENST00000380324 K7ERU9 68 aa8.2□□□□□ -1.1
USP3-202ENST00000380324 LINC00158P58513 81 aa8.2□□□□□ -1.1
USP3-202ENST00000380324 LYPD5Q6UWN5 251 aa8.2□□□□□ -1.1
USP3-202ENST00000380324 KLK12Q9UKR0 248 aa8.2□□□□□ -1.1
USP3-202ENST00000380324 COX7A2LO14548 114 aa8.2□□□□□ -1.1
USP3-202ENST00000380324 ETDBQ3ZM63 59 aa8.2□□□□□ -1.1
USP3-202ENST00000380324 CD164L2Q6UWJ8 174 aa8.2□□□□□ -1.1
USP3-202ENST00000380324 C2orf82Q6UX34 121 aa8.2□□□□□ -1.1
USP3-202ENST00000380324 TRBV20-1A0A075B6N2 111 aa8.19□□□□□ -1.1
USP3-202ENST00000380324 MRAPQ8TCY5 172 aa8.19□□□□□ -1.1
USP3-202ENST00000380324 COPS9Q8WXC6 57 aa8.19□□□□□ -1.1
USP3-202ENST00000380324 MALP21145 153 aa8.19□□□□□ -1.1
USP3-202ENST00000380324 WFDC10BQ8IUB3 73 aa8.19□□□□□ -1.1
USP3-202ENST00000380324 C11orf45Q8TAV5 145 aa8.19□□□□□ -1.1
USP3-202ENST00000380324 Q8IZM0 81 aa8.18□□□□□ -1.1
USP3-202ENST00000380324 DEFB131BA0A096LNP1 70 aa8.17□□□□□ -1.1
USP3-202ENST00000380324 TRBV30A0A0K0K1B3 111 aa8.17□□□□□ -1.1
USP3-202ENST00000380324 SMCPP49901 116 aaPredicted RBP8.17□□□□□ -1.1
USP3-202ENST00000380324 CKS1BP61024 79 aa8.17□□□□□ -1.1
USP3-202ENST00000380324 IBA57-AS1B1ANH7 110 aa8.17□□□□□ -1.1
USP3-202ENST00000380324 DEFB121Q5J5C9 76 aa8.17□□□□□ -1.1
USP3-202ENST00000380324 GAGE12HA6NDE8 117 aa8.16□□□□□ -1.1
USP3-202ENST00000380324 H3BNG1 76 aa8.16□□□□□ -1.1
USP3-202ENST00000380324 FOXI1Q12951 378 aa8.16□□□□□ -1.1
USP3-202ENST00000380324 C9JAW5 83 aa8.15□□□□□ -1.1
USP3-202ENST00000380324 K7EIL1 84 aa8.15□□□□□ -1.1
USP3-202ENST00000380324 CRPP02741 224 aa8.15□□□□□ -1.1
USP3-202ENST00000380324 CLEC2BQ92478 149 aa8.15□□□□□ -1.1
USP3-202ENST00000380324 UBE2WQ96B02 151 aa8.15□□□□□ -1.1
USP3-202ENST00000380324 VPS25Q9BRG1 176 aa8.15□□□□□ -1.1
USP3-202ENST00000380324 SND1-IT1Q9HBX3 110 aa8.15□□□□□ -1.1
USP3-202ENST00000380324 ENHOQ6UWT2 76 aa8.15□□□□□ -1.1
USP3-202ENST00000380324 PRR34Q9NV39 138 aa8.15□□□□□ -1.1
USP3-202ENST00000380324 COX6CP09669 75 aa8.14□□□□□ -1.11
USP3-202ENST00000380324 ATXN8Q156A1 80 aa8.14□□□□□ -1.11
USP3-202ENST00000380324 SPATA25Q9BR10 227 aa8.14□□□□□ -1.11
USP3-202ENST00000380324 CCL18P55774 89 aa8.14□□□□□ -1.11
USP3-202ENST00000380324 LINC01561Q8N1V8 128 aa8.14□□□□□ -1.11
USP3-202ENST00000380324 LINC00526Q96FQ7 95 aa8.14□□□□□ -1.11
USP3-202ENST00000380324 KIAA0087Q14695 138 aa8.13□□□□□ -1.11
USP3-202ENST00000380324 ESRGQ1W209 222 aa8.13□□□□□ -1.11
USP3-202ENST00000380324 HUWE1Q7Z6Z7 4374 aaKnown RBP8.13□□□□□ -1.11
USP3-202ENST00000380324 IGKV2-28A0A075B6P5 120 aa8.12□□□□□ -1.11
USP3-202ENST00000380324 SLC25A20O43772 301 aa8.12□□□□□ -1.11
USP3-202ENST00000380324 IGKV2D-28P01615 120 aa8.12□□□□□ -1.11
USP3-202ENST00000380324 SPAG11BQ08648 103 aa8.12□□□□□ -1.11
USP3-202ENST00000380324 C9orf116Q5BN46 136 aaPredicted RBP8.12□□□□□ -1.11
USP3-202ENST00000380324 LINC00337Q8N6G1 96 aa8.12□□□□□ -1.11
USP3-202ENST00000380324 LINC01620Q4KN68 170 aa8.12□□□□□ -1.11
USP3-202ENST00000380324 C6orf223Q8N319 242 aa8.12□□□□□ -1.11
USP3-202ENST00000380324 TM2D3Q9BRN9 247 aa8.12□□□□□ -1.11
USP3-202ENST00000380324 CXCL5P42830 114 aa8.11□□□□□ -1.11
USP3-202ENST00000380324 MDFIQ99750 246 aa8.11□□□□□ -1.11
USP3-202ENST00000380324 PPDPFQ9H3Y8 114 aa8.11□□□□□ -1.11
USP3-202ENST00000380324 ANKRD29Q8N6D5 301 aa8.1□□□□□ -1.11
USP3-202ENST00000380324 TRAV13-2A0A0B4J235 113 aa8.09□□□□□ -1.11
USP3-202ENST00000380324 COL7A1Q02388 2944 aa8.09□□□□□ -1.11
USP3-202ENST00000380324 LST1O00453 97 aa8.09□□□□□ -1.11
USP3-202ENST00000380324 C10orf25Q5T742 122 aa8.09□□□□□ -1.11
USP3-202ENST00000380324 TEN1Q86WV5 123 aa8.09□□□□□ -1.11
USP3-202ENST00000380324 STAB2Q8WWQ8 2551 aa8.08□□□□□ -1.12
USP3-202ENST00000380324 TRAV10A0A0B4J240 114 aa8.08□□□□□ -1.12
USP3-202ENST00000380324 TRAV8-4A0A0B4J246 113 aa8.08□□□□□ -1.12
USP3-202ENST00000380324 J3QR89 54 aa8.08□□□□□ -1.12
USP3-202ENST00000380324 UNQ6190/PRO20217Q6UXQ8 127 aa8.08□□□□□ -1.12
USP3-202ENST00000380324 KLK5Q9Y337 293 aaPredicted RBP8.08□□□□□ -1.12
USP3-202ENST00000380324 OR13C6PQ8NH95 151 aa8.07□□□□□ -1.12
USP3-202ENST00000380324 CBY1Q9Y3M2 126 aa8.07□□□□□ -1.12
USP3-202ENST00000380324 TRBV10-2A0A0K0K1G8 114 aa8.06□□□□□ -1.12
USP3-202ENST00000380324 HIGD2BQ4VC39 106 aa8.06□□□□□ -1.12
USP3-202ENST00000380324 COX17Q14061 63 aa8.06□□□□□ -1.12
USP3-202ENST00000380324 PRR3P79522 188 aaKnown RBP8.05□□□□□ -1.12
USP3-202ENST00000380324 LINC01556Q5JQF7 62 aa8.05□□□□□ -1.12
USP3-202ENST00000380324 SMIM11BQ8TCY0 68 aa8.05□□□□□ -1.12
USP3-202ENST00000380324 PPDPFLQ8WWR9 84 aa8.05□□□□□ -1.12
USP3-202ENST00000380324 CARD19Q96LW7 228 aa8.05□□□□□ -1.12
USP3-202ENST00000380324 NTN5Q8WTR8 489 aaPredicted RBP8.04□□□□□ -1.12
USP3-202ENST00000380324 FAM218AQ96MZ4 157 aa8.04□□□□□ -1.12
USP3-202ENST00000380324 Q9HAA7 133 aa8.04□□□□□ -1.12
USP3-202ENST00000380324 IGKV2D-24A0A075B6R9 120 aa8.04□□□□□ -1.12
USP3-202ENST00000380324 RPL28P46779 137 aaKnown RBP8.04□□□□□ -1.12
USP3-202ENST00000380324 C1orf43Q9BWL3 253 aa8.04□□□□□ -1.12
USP3-202ENST00000380324 C15orf53Q8NAA6 179 aa8.03□□□□□ -1.12
USP3-202ENST00000380324 KRTAP26-1Q6PEX3 210 aa8.03□□□□□ -1.12
USP3-202ENST00000380324 ZNF561-AS1K7EIQ3 104 aa8.02□□□□□ -1.13
USP3-202ENST00000380324 LINC00588Q9Y4M8 146 aa8.02□□□□□ -1.13
USP3-202ENST00000380324 LYSTQ99698 3801 aa8.02□□□□□ -1.13
USP3-202ENST00000380324 TEX49A0A1B0GTD5 131 aa8.02□□□□□ -1.13
USP3-202ENST00000380324 M0QXV9 152 aa8.02□□□□□ -1.13
USP3-202ENST00000380324 NCR3O14931 201 aa8.02□□□□□ -1.13
USP3-202ENST00000380324 Q8NDZ9 215 aa8.02□□□□□ -1.13
USP3-202ENST00000380324 C6orf48Q9UBA6 75 aa8.02□□□□□ -1.13
USP3-202ENST00000380324 H3BT86 120 aa8.01□□□□□ -1.13
USP3-202ENST00000380324 DNAH10OSP0CZ25 163 aa8.01□□□□□ -1.13
USP3-202ENST00000380324 C15orf56Q8N910 161 aa8.01□□□□□ -1.13
USP3-202ENST00000380324 CAMK2N2Q96S95 79 aa8.01□□□□□ -1.13
USP3-202ENST00000380324 A0A087WYN8 130 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms