RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 LRCOL1A6NCL2 159 aa5.25□□□□□ -1.57
CDKL5-201ENST00000379989 PSPHP1O15172 72 aa5.25□□□□□ -1.57
CDKL5-201ENST00000379989 IGHV4-59P01825 116 aa5.25□□□□□ -1.57
CDKL5-201ENST00000379989 HAMPP81172 84 aa5.25□□□□□ -1.57
CDKL5-201ENST00000379989 hDV103S1A0JD37 113 aa5.24□□□□□ -1.57
CDKL5-201ENST00000379989 PRYO14603 147 aa5.24□□□□□ -1.57
CDKL5-201ENST00000379989 APOC4P55056 127 aa5.24□□□□□ -1.57
CDKL5-201ENST00000379989 K7EQG2 157 aa5.24□□□□□ -1.57
CDKL5-201ENST00000379989 DYNLRB2Q8TF09 96 aa5.24□□□□□ -1.57
CDKL5-201ENST00000379989 IGHV3-16A0A0C4DH30 117 aa5.24□□□□□ -1.57
CDKL5-201ENST00000379989 M0R2N4 97 aa5.24□□□□□ -1.57
CDKL5-201ENST00000379989 LINC00167Q96N53 147 aa5.24□□□□□ -1.57
CDKL5-201ENST00000379989 LINC00588Q9Y4M8 146 aa5.24□□□□□ -1.57
CDKL5-201ENST00000379989 ERC2-IT1O76042 136 aa5.23□□□□□ -1.57
CDKL5-201ENST00000379989 Q6ZVQ6 151 aa5.23□□□□□ -1.57
CDKL5-201ENST00000379989 LINC00242Q5T6M2 205 aa5.23□□□□□ -1.57
CDKL5-201ENST00000379989 KRTAP1-3Q8IUG1 177 aa5.22□□□□□ -1.57
CDKL5-201ENST00000379989 IGHV3OR16-12A0A075B7B8 117 aa5.22□□□□□ -1.57
CDKL5-201ENST00000379989 M0R378 163 aa5.22□□□□□ -1.57
CDKL5-201ENST00000379989 HRNRQ86YZ3 2850 aaPredicted RBP5.22□□□□□ -1.57
CDKL5-201ENST00000379989 TRAV22A0A0B4J277 110 aa5.22□□□□□ -1.57
CDKL5-201ENST00000379989 PRB1P04280 392 aa5.22□□□□□ -1.57
CDKL5-201ENST00000379989 RNASE1P07998 156 aaKnown RBP5.22□□□□□ -1.57
CDKL5-201ENST00000379989 PLA2G2AP14555 144 aa5.22□□□□□ -1.57
CDKL5-201ENST00000379989 PROK1P58294 105 aa5.22□□□□□ -1.57
CDKL5-201ENST00000379989 CXCL6P80162 114 aa5.22□□□□□ -1.57
CDKL5-201ENST00000379989 Q6ZQT0 140 aa5.22□□□□□ -1.57
CDKL5-201ENST00000379989 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.22□□□□□ -1.57
CDKL5-201ENST00000379989 DOPEY2Q9Y3R5 2298 aa5.21□□□□□ -1.57
CDKL5-201ENST00000379989 TRBV10-1A0A0K0K1A3 114 aa5.21□□□□□ -1.57
CDKL5-201ENST00000379989 ABCA2Q9BZC7 2435 aa5.21□□□□□ -1.58
CDKL5-201ENST00000379989 SPTBN2O15020 2390 aa5.21□□□□□ -1.58
CDKL5-201ENST00000379989 LRBAP50851 2863 aa5.21□□□□□ -1.58
CDKL5-201ENST00000379989 IGHV3-73A0A0B4J1V6 119 aa5.21□□□□□ -1.58
CDKL5-201ENST00000379989 TMEM256-PLSCR3K7ERE1 68 aa5.21□□□□□ -1.58
CDKL5-201ENST00000379989 DGAT2L7PQ6IED9 249 aa5.21□□□□□ -1.58
CDKL5-201ENST00000379989 ZNF469Q96JG9 3925 aaPredicted RBP5.21□□□□□ -1.58
CDKL5-201ENST00000379989 CR1P17927 2039 aa5.21□□□□□ -1.58
CDKL5-201ENST00000379989 CHD8Q9HCK8 2581 aa5.2□□□□□ -1.58
CDKL5-201ENST00000379989 CSMD2Q7Z408 3487 aa5.2□□□□□ -1.58
CDKL5-201ENST00000379989 BPY2O14599 106 aa5.2□□□□□ -1.58
CDKL5-201ENST00000379989 CCL18P55774 89 aa5.2□□□□□ -1.58
CDKL5-201ENST00000379989 SYCNQ0VAF6 134 aa5.2□□□□□ -1.58
CDKL5-201ENST00000379989 NCOR2Q9Y618 2525 aa5.2□□□□□ -1.58
CDKL5-201ENST00000379989 H3BS24 57 aa5.2□□□□□ -1.58
CDKL5-201ENST00000379989 Q8N814 137 aa5.2□□□□□ -1.58
CDKL5-201ENST00000379989 SPTBN1Q01082 2364 aaKnown RBP5.19□□□□□ -1.58
CDKL5-201ENST00000379989 IGHV3-11P01762 117 aa5.19□□□□□ -1.58
CDKL5-201ENST00000379989 SCXQ7RTU7 201 aa5.19□□□□□ -1.58
CDKL5-201ENST00000379989 FBN2P35556 2912 aa5.19□□□□□ -1.58
CDKL5-201ENST00000379989 IGKV3-7A0A075B6H7 116 aa5.19□□□□□ -1.58
CDKL5-201ENST00000379989 C1orf64Q8NEQ6 169 aa5.19□□□□□ -1.58
CDKL5-201ENST00000379989 CHD6Q8TD26 2715 aa5.18□□□□□ -1.58
CDKL5-201ENST00000379989 LY6G6DO95868 133 aa5.18□□□□□ -1.58
CDKL5-201ENST00000379989 HIGD2AQ9BW72 106 aa5.18□□□□□ -1.58
CDKL5-201ENST00000379989 LOC110117498A0A087WWA1 95 aa5.18□□□□□ -1.58
CDKL5-201ENST00000379989 UTP20O75691 2785 aaKnown RBP5.18□□□□□ -1.58
CDKL5-201ENST00000379989 UBE2BP63146 152 aa5.18□□□□□ -1.58
CDKL5-201ENST00000379989 FAM19A3Q7Z5A8 133 aa5.18□□□□□ -1.58
CDKL5-201ENST00000379989 OCR1Q9BZK8 76 aa5.18□□□□□ -1.58
CDKL5-201ENST00000379989 A8MUN3 132 aa5.17□□□□□ -1.58
CDKL5-201ENST00000379989 C8orf87E5RJ46 101 aa5.17□□□□□ -1.58
CDKL5-201ENST00000379989 ATRXP46100 2492 aa5.17□□□□□ -1.58
CDKL5-201ENST00000379989 PDZD2O15018 2839 aa5.17□□□□□ -1.58
CDKL5-201ENST00000379989 CD164L2Q6UWJ8 174 aa5.17□□□□□ -1.58
CDKL5-201ENST00000379989 Q6ZSN1 163 aa5.17□□□□□ -1.58
CDKL5-201ENST00000379989 DNAJC9-AS1A6NH13 148 aa5.16□□□□□ -1.58
CDKL5-201ENST00000379989 LINC00158P58513 81 aa5.16□□□□□ -1.58
CDKL5-201ENST00000379989 TRBV6-4A0A1B0GX49 114 aa5.16□□□□□ -1.58
CDKL5-201ENST00000379989 C16orf90A8MZG2 172 aa5.16□□□□□ -1.58
CDKL5-201ENST00000379989 ZNF73O43830 326 aaPredicted RBP5.16□□□□□ -1.58
CDKL5-201ENST00000379989 KRTAP10-9P60411 292 aa5.16□□□□□ -1.58
CDKL5-201ENST00000379989 Q5VV11 94 aa5.16□□□□□ -1.58
CDKL5-201ENST00000379989 NTM-AS1Q6ZSK4 140 aa5.16□□□□□ -1.58
CDKL5-201ENST00000379989 ESM1Q9NQ30 184 aa5.15□□□□□ -1.58
CDKL5-201ENST00000379989 NANOS2P60321 138 aaKnown RBP5.15□□□□□ -1.59
CDKL5-201ENST00000379989 DEFB114Q30KQ6 69 aa5.15□□□□□ -1.59
CDKL5-201ENST00000379989 GCN1Q92616 2671 aaKnown RBP5.15□□□□□ -1.59
CDKL5-201ENST00000379989 LYRM9A8MSI8 78 aa5.14□□□□□ -1.59
CDKL5-201ENST00000379989 NDUFS5O43920 106 aa5.14□□□□□ -1.59
CDKL5-201ENST00000379989 INSP01308 110 aa5.14□□□□□ -1.59
CDKL5-201ENST00000379989 PHF5AQ7RTV0 110 aaKnown RBP5.14□□□□□ -1.59
CDKL5-201ENST00000379989 LINC00269Q8N2A0 174 aa5.14□□□□□ -1.59
CDKL5-201ENST00000379989 ASH1LQ9NR48 2969 aaKnown RBP5.14□□□□□ -1.59
CDKL5-201ENST00000379989 COX7B2Q8TF08 81 aa5.14□□□□□ -1.59
CDKL5-201ENST00000379989 CRYBG3Q68DQ2 2970 aa5.13□□□□□ -1.59
CDKL5-201ENST00000379989 A6NN06 94 aa5.13□□□□□ -1.59
CDKL5-201ENST00000379989 IGKV3-20P01619 116 aa5.13□□□□□ -1.59
CDKL5-201ENST00000379989 KRTAP1-1Q07627 177 aa5.13□□□□□ -1.59
CDKL5-201ENST00000379989 PSCAO43653 123 aa5.13□□□□□ -1.59
CDKL5-201ENST00000379989 SPTSSBQ8NFR3 76 aa5.13□□□□□ -1.59
CDKL5-201ENST00000379989 Q8N9L7 120 aa5.13□□□□□ -1.59
CDKL5-201ENST00000379989 TOMM7Q9P0U1 55 aa5.13□□□□□ -1.59
CDKL5-201ENST00000379989 CCL24O00175 119 aa5.12□□□□□ -1.59
CDKL5-201ENST00000379989 C9orf66Q5T8R8 295 aa5.12□□□□□ -1.59
CDKL5-201ENST00000379989 FLNCQ14315 2725 aa5.12□□□□□ -1.59
CDKL5-201ENST00000379989 K7EQD1 137 aa5.12□□□□□ -1.59
CDKL5-201ENST00000379989 MAP6D1Q9H9H5 199 aa5.12□□□□□ -1.59
CDKL5-201ENST00000379989 SPINK13Q1W4C9 94 aa5.11□□□□□ -1.59
CDKL5-201ENST00000379989 LINC01006Q8NI28 216 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms