RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 RPL13AP40429 203 aaKnown RBP7.22□□□□□ -1.25
POLR2J3-201ENST00000379340 KRTAP10-11P60412 298 aa7.22□□□□□ -1.25
POLR2J3-201ENST00000379340 OXLD1Q5BKU9 147 aa7.22□□□□□ -1.25
POLR2J3-201ENST00000379340 Q8IZM0 81 aa7.22□□□□□ -1.25
POLR2J3-201ENST00000379340 DAND5Q8N907 189 aa7.22□□□□□ -1.25
POLR2J3-201ENST00000379340 C11orf68Q9H3H3 251 aaKnown RBP7.22□□□□□ -1.25
POLR2J3-201ENST00000379340 TOMM7Q9P0U1 55 aa7.22□□□□□ -1.25
POLR2J3-201ENST00000379340 BIRC6Q9NR09 4857 aa7.22□□□□□ -1.25
POLR2J3-201ENST00000379340 TRIAP1O43715 76 aa7.21□□□□□ -1.25
POLR2J3-201ENST00000379340 ETDBQ3ZM63 59 aa7.21□□□□□ -1.25
POLR2J3-201ENST00000379340 CD164L2Q6UWJ8 174 aa7.21□□□□□ -1.25
POLR2J3-201ENST00000379340 EPPK1P58107 5090 aaKnown RBP7.21□□□□□ -1.26
POLR2J3-201ENST00000379340 CXCL5P42830 114 aa7.2□□□□□ -1.26
POLR2J3-201ENST00000379340 SMCPP49901 116 aaPredicted RBP7.2□□□□□ -1.26
POLR2J3-201ENST00000379340 C5orf38Q86SI9 138 aa7.2□□□□□ -1.26
POLR2J3-201ENST00000379340 LINC01600Q96MT4 127 aa7.2□□□□□ -1.26
POLR2J3-201ENST00000379340 KRTAP17-1Q9BYP8 105 aa7.2□□□□□ -1.26
POLR2J3-201ENST00000379340 KRTAP3-3Q9BYR6 98 aa7.2□□□□□ -1.26
POLR2J3-201ENST00000379340 KRTAP3-2Q9BYR7 98 aa7.2□□□□□ -1.26
POLR2J3-201ENST00000379340 DNAH3Q8TD57 4116 aa7.2□□□□□ -1.26
POLR2J3-201ENST00000379340 HTN3P15516 51 aa7.2□□□□□ -1.26
POLR2J3-201ENST00000379340 XCL1P47992 114 aa7.2□□□□□ -1.26
POLR2J3-201ENST00000379340 SOSTDC1Q6X4U4 206 aa7.2□□□□□ -1.26
POLR2J3-201ENST00000379340 TRAV13-2A0A0B4J235 113 aa7.19□□□□□ -1.26
POLR2J3-201ENST00000379340 A0A0U1RRA0 63 aa7.19□□□□□ -1.26
POLR2J3-201ENST00000379340 ANGP03950 147 aaKnown RBP7.19□□□□□ -1.26
POLR2J3-201ENST00000379340 REG3AQ06141 175 aa7.19□□□□□ -1.26
POLR2J3-201ENST00000379340 C21orf62-AS1Q17RA5 79 aa7.19□□□□□ -1.26
POLR2J3-201ENST00000379340 LINC01620Q4KN68 170 aa7.19□□□□□ -1.26
POLR2J3-201ENST00000379340 C6orf226Q5I0X4 101 aa7.19□□□□□ -1.26
POLR2J3-201ENST00000379340 TEN1Q86WV5 123 aa7.19□□□□□ -1.26
POLR2J3-201ENST00000379340 LINC00269Q8N2A0 174 aa7.19□□□□□ -1.26
POLR2J3-201ENST00000379340 MTURNQ8N3F0 131 aa7.19□□□□□ -1.26
POLR2J3-201ENST00000379340 COX7A2LO14548 114 aa7.18□□□□□ -1.26
POLR2J3-201ENST00000379340 SLC25A20O43772 301 aa7.18□□□□□ -1.26
POLR2J3-201ENST00000379340 PCP4P48539 62 aa7.18□□□□□ -1.26
POLR2J3-201ENST00000379340 LINC00158P58513 81 aa7.18□□□□□ -1.26
POLR2J3-201ENST00000379340 MIR7-3HGQ8N6C7 128 aa7.18□□□□□ -1.26
POLR2J3-201ENST00000379340 CHCHD10Q8WYQ3 142 aaPredicted RBP7.18□□□□□ -1.26
POLR2J3-201ENST00000379340 C9JAW5 83 aa7.17□□□□□ -1.26
POLR2J3-201ENST00000379340 FOXI1Q12951 378 aa7.17□□□□□ -1.26
POLR2J3-201ENST00000379340 PPDPFLQ8WWR9 84 aa7.17□□□□□ -1.26
POLR2J3-201ENST00000379340 TRBV10-2A0A0K0K1G8 114 aa7.16□□□□□ -1.26
POLR2J3-201ENST00000379340 LST1O00453 97 aa7.16□□□□□ -1.26
POLR2J3-201ENST00000379340 CRPP02741 224 aa7.16□□□□□ -1.26
POLR2J3-201ENST00000379340 CFAP161Q6P656 301 aa7.16□□□□□ -1.26
POLR2J3-201ENST00000379340 CLPSL2Q6UWE3 100 aa7.16□□□□□ -1.26
POLR2J3-201ENST00000379340 TENM2Q9NT68 2774 aa7.16□□□□□ -1.26
POLR2J3-201ENST00000379340 H3BT86 120 aa7.16□□□□□ -1.26
POLR2J3-201ENST00000379340 MALP21145 153 aa7.16□□□□□ -1.26
POLR2J3-201ENST00000379340 COX17Q14061 63 aa7.16□□□□□ -1.26
POLR2J3-201ENST00000379340 LYPD5Q6UWN5 251 aa7.16□□□□□ -1.26
POLR2J3-201ENST00000379340 ANKRD29Q8N6D5 301 aa7.16□□□□□ -1.26
POLR2J3-201ENST00000379340 SND1-IT1Q9HBX3 110 aa7.16□□□□□ -1.26
POLR2J3-201ENST00000379340 PRR34Q9NV39 138 aa7.16□□□□□ -1.26
POLR2J3-201ENST00000379340 CKS1BP61024 79 aa7.15□□□□□ -1.27
POLR2J3-201ENST00000379340 MUC7Q8TAX7 377 aa7.15□□□□□ -1.27
POLR2J3-201ENST00000379340 RETNQ9HD89 108 aa7.15□□□□□ -1.27
POLR2J3-201ENST00000379340 RYR2Q92736 4967 aa7.15□□□□□ -1.27
POLR2J3-201ENST00000379340 TRAV8-4A0A0B4J246 113 aa7.14□□□□□ -1.27
POLR2J3-201ENST00000379340 K7EIL1 84 aa7.14□□□□□ -1.27
POLR2J3-201ENST00000379340 CCL18P55774 89 aa7.14□□□□□ -1.27
POLR2J3-201ENST00000379340 KIAA0087Q14695 138 aa7.14□□□□□ -1.27
POLR2J3-201ENST00000379340 KLK5Q9Y337 293 aaPredicted RBP7.14□□□□□ -1.27
POLR2J3-201ENST00000379340 PFN2P35080 140 aa7.13□□□□□ -1.27
POLR2J3-201ENST00000379340 RPL28P46779 137 aaKnown RBP7.13□□□□□ -1.27
POLR2J3-201ENST00000379340 CARD19Q96LW7 228 aa7.12□□□□□ -1.27
POLR2J3-201ENST00000379340 SPATA25Q9BR10 227 aa7.12□□□□□ -1.27
POLR2J3-201ENST00000379340 DNAH9Q9NYC9 4486 aa7.12□□□□□ -1.27
POLR2J3-201ENST00000379340 GAGE12HA6NDE8 117 aa7.12□□□□□ -1.27
POLR2J3-201ENST00000379340 TRACP01848 142 aa7.12□□□□□ -1.27
POLR2J3-201ENST00000379340 C2orf82Q6UX34 121 aa7.12□□□□□ -1.27
POLR2J3-201ENST00000379340 Q6ZTC4 211 aa7.12□□□□□ -1.27
POLR2J3-201ENST00000379340 Q8N3U1 123 aa7.12□□□□□ -1.27
POLR2J3-201ENST00000379340 CLEC2BQ92478 149 aa7.12□□□□□ -1.27
POLR2J3-201ENST00000379340 WWC2-AS2Q96NR7 200 aa7.12□□□□□ -1.27
POLR2J3-201ENST00000379340 IGLV10-54A0A075B6I4 117 aa7.11□□□□□ -1.27
POLR2J3-201ENST00000379340 IGKV2-28A0A075B6P5 120 aa7.11□□□□□ -1.27
POLR2J3-201ENST00000379340 IGKV2D-28P01615 120 aa7.11□□□□□ -1.27
POLR2J3-201ENST00000379340 KLK12Q9UKR0 248 aa7.11□□□□□ -1.27
POLR2J3-201ENST00000379340 STAB2Q8WWQ8 2551 aa7.11□□□□□ -1.27
POLR2J3-201ENST00000379340 DYNC2H1Q8NCM8 4307 aaKnown RBP7.1□□□□□ -1.27
POLR2J3-201ENST00000379340 A0A0J9YWU9 116 aa7.1□□□□□ -1.27
POLR2J3-201ENST00000379340 NDUFC2O95298 119 aa7.1□□□□□ -1.27
POLR2J3-201ENST00000379340 ENHOQ6UWT2 76 aa7.1□□□□□ -1.27
POLR2J3-201ENST00000379340 LINC00337Q8N6G1 96 aa7.1□□□□□ -1.27
POLR2J3-201ENST00000379340 C11orf45Q8TAV5 145 aa7.1□□□□□ -1.27
POLR2J3-201ENST00000379340 H0YGX0 51 aa7.09□□□□□ -1.27
POLR2J3-201ENST00000379340 SPAG11BQ08648 103 aa7.09□□□□□ -1.27
POLR2J3-201ENST00000379340 NTN5Q8WTR8 489 aaPredicted RBP7.09□□□□□ -1.27
POLR2J3-201ENST00000379340 UBE2WQ96B02 151 aa7.09□□□□□ -1.27
POLR2J3-201ENST00000379340 DEFB131BA0A096LNP1 70 aa7.08□□□□□ -1.28
POLR2J3-201ENST00000379340 GVQW2A0A096LPI5 108 aaPredicted RBP7.08□□□□□ -1.28
POLR2J3-201ENST00000379340 DEFB121Q5J5C9 76 aa7.08□□□□□ -1.28
POLR2J3-201ENST00000379340 SIGMAR1Q99720 223 aa7.08□□□□□ -1.28
POLR2J3-201ENST00000379340 NANOS2P60321 138 aaKnown RBP7.07□□□□□ -1.28
POLR2J3-201ENST00000379340 WFDC10BQ8IUB3 73 aa7.07□□□□□ -1.28
POLR2J3-201ENST00000379340 C15orf53Q8NAA6 179 aa7.07□□□□□ -1.28
POLR2J3-201ENST00000379340 TRAV10A0A0B4J240 114 aa7.06□□□□□ -1.28
POLR2J3-201ENST00000379340 LINC01556Q5JQF7 62 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms