RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 HERVK_113P63121 156 aa11.7□□□□□ -0.54
CBWD3-204ENST00000377349 TOMM6Q96B49 74 aa11.7□□□□□ -0.54
CBWD3-204ENST00000377349 SEC11CQ9BY50 192 aa11.7□□□□□ -0.54
CBWD3-204ENST00000377349 TRAV9-1A0A075B6T8 112 aa11.69□□□□□ -0.54
CBWD3-204ENST00000377349 NDUFC2-KCTD14E9PQ53 114 aa11.69□□□□□ -0.54
CBWD3-204ENST00000377349 LINC00469Q8N7U9 141 aa11.69□□□□□ -0.54
CBWD3-204ENST00000377349 CDKN2A-AS1Q9UH64 79 aa11.69□□□□□ -0.54
CBWD3-204ENST00000377349 NPSP0C0P6 89 aa11.69□□□□□ -0.54
CBWD3-204ENST00000377349 LINC01561Q8N1V8 128 aa11.69□□□□□ -0.54
CBWD3-204ENST00000377349 TIMM17AQ99595 171 aa11.69□□□□□ -0.54
CBWD3-204ENST00000377349 SEC11AP67812 179 aa11.68□□□□□ -0.54
CBWD3-204ENST00000377349 RPS10P5Q9NQ39 176 aa11.68□□□□□ -0.54
CBWD3-204ENST00000377349 FABP9Q0Z7S8 132 aa11.67□□□□□ -0.54
CBWD3-204ENST00000377349 GNB1LQ9BYB4 327 aa11.67□□□□□ -0.54
CBWD3-204ENST00000377349 SMCO4Q9NRQ5 59 aa11.67□□□□□ -0.54
CBWD3-204ENST00000377349 IGLV7-43P04211 117 aa11.66□□□□□ -0.54
CBWD3-204ENST00000377349 C9orf129Q5T035 196 aaKnown RBP11.66□□□□□ -0.54
CBWD3-204ENST00000377349 FA2HQ7L5A8 372 aa11.66□□□□□ -0.54
CBWD3-204ENST00000377349 ERASQ7Z444 233 aa11.66□□□□□ -0.54
CBWD3-204ENST00000377349 KRTAP11-1Q8IUC1 163 aa11.66□□□□□ -0.54
CBWD3-204ENST00000377349 Q8IZM0 81 aa11.66□□□□□ -0.54
CBWD3-204ENST00000377349 MRPL18Q9H0U6 180 aaKnown RBP11.66□□□□□ -0.54
CBWD3-204ENST00000377349 XAGE1AQ9HD64 81 aa11.65□□□□□ -0.54
CBWD3-204ENST00000377349 FAM19A3Q7Z5A8 133 aa11.63□□□□□ -0.55
CBWD3-204ENST00000377349 KRTAP7-1Q8IUC3 87 aa11.63□□□□□ -0.55
CBWD3-204ENST00000377349 DIRC1Q969H9 104 aa11.63□□□□□ -0.55
CBWD3-204ENST00000377349 F8VRH5 84 aa11.61□□□□□ -0.55
CBWD3-204ENST00000377349 RHEBQ15382 184 aa11.61□□□□□ -0.55
CBWD3-204ENST00000377349 COX19Q49B96 90 aa11.61□□□□□ -0.55
CBWD3-204ENST00000377349 MUC2Q02817 5179 aa11.61□□□□□ -0.55
CBWD3-204ENST00000377349 SPINK8P0C7L1 97 aa11.6□□□□□ -0.55
CBWD3-204ENST00000377349 NDUFA6P56556 154 aa11.6□□□□□ -0.55
CBWD3-204ENST00000377349 TINCRA0A1B0GVN0 87 aa11.6□□□□□ -0.55
CBWD3-204ENST00000377349 SMIM1B2RUZ4 78 aa11.6□□□□□ -0.55
CBWD3-204ENST00000377349 COX7B2Q8TF08 81 aa11.6□□□□□ -0.55
CBWD3-204ENST00000377349 PRR26Q8N8Z3 221 aa11.59□□□□□ -0.55
CBWD3-204ENST00000377349 CST9LQ9H4G1 147 aa11.59□□□□□ -0.55
CBWD3-204ENST00000377349 H0Y9J4 135 aa11.58□□□□□ -0.56
CBWD3-204ENST00000377349 CXCL5P42830 114 aa11.58□□□□□ -0.56
CBWD3-204ENST00000377349 PMVKQ15126 192 aa11.58□□□□□ -0.56
CBWD3-204ENST00000377349 LINC01549A6NIU2 74 aa11.57□□□□□ -0.56
CBWD3-204ENST00000377349 RAB5BP61020 215 aa11.57□□□□□ -0.56
CBWD3-204ENST00000377349 CARHSP1Q9Y2V2 147 aaKnown RBP11.57□□□□□ -0.56
CBWD3-204ENST00000377349 TRAPPC1Q9Y5R8 145 aa11.57□□□□□ -0.56
CBWD3-204ENST00000377349 PDZD11Q5EBL8 140 aa11.56□□□□□ -0.56
CBWD3-204ENST00000377349 C22orf24Q9Y442 160 aa11.56□□□□□ -0.56
CBWD3-204ENST00000377349 LINC01546A6NGU7 62 aa11.55□□□□□ -0.56
CBWD3-204ENST00000377349 APOC3P02656 99 aa11.55□□□□□ -0.56
CBWD3-204ENST00000377349 C10orf91Q5T1B1 145 aa11.55□□□□□ -0.56
CBWD3-204ENST00000377349 KRTAP1-4P0C5Y4 121 aa11.54□□□□□ -0.56
CBWD3-204ENST00000377349 PMCHL1Q16048 86 aa11.54□□□□□ -0.56
CBWD3-204ENST00000377349 H3BRM9 83 aa11.53□□□□□ -0.56
CBWD3-204ENST00000377349 LBHQ53QV2 105 aaPredicted RBP11.53□□□□□ -0.56
CBWD3-204ENST00000377349 IGLV5-45A0A087WSX0 123 aa11.52□□□□□ -0.57
CBWD3-204ENST00000377349 MRPL55Q7Z7F7 128 aaKnown RBP11.52□□□□□ -0.57
CBWD3-204ENST00000377349 GAGE10A6NGK3 116 aa11.51□□□□□ -0.57
CBWD3-204ENST00000377349 NDUFA5Q16718 116 aa11.51□□□□□ -0.57
CBWD3-204ENST00000377349 C18orf32Q8TCD1 76 aa11.51□□□□□ -0.57
CBWD3-204ENST00000377349 RPL37AP8A6NKH3 93 aa11.5□□□□□ -0.57
CBWD3-204ENST00000377349 ATP5LO75964 103 aa11.5□□□□□ -0.57
CBWD3-204ENST00000377349 LINC00614P0C842 121 aa11.5□□□□□ -0.57
CBWD3-204ENST00000377349 HBDP02042 147 aa11.49□□□□□ -0.57
CBWD3-204ENST00000377349 IGLV1-50A0A075B6I6 118 aa11.48□□□□□ -0.57
CBWD3-204ENST00000377349 NUPR1O60356 82 aa11.48□□□□□ -0.57
CBWD3-204ENST00000377349 PFN2P35080 140 aa11.48□□□□□ -0.57
CBWD3-204ENST00000377349 A0A096LNJ9 63 aa11.47□□□□□ -0.57
CBWD3-204ENST00000377349 SNAPINO95295 136 aa11.47□□□□□ -0.57
CBWD3-204ENST00000377349 IGLC3P0DOY3 106 aa11.47□□□□□ -0.57
CBWD3-204ENST00000377349 SVBPQ8N300 66 aa11.47□□□□□ -0.57
CBWD3-204ENST00000377349 NKAPP1Q8N9T2 125 aa11.47□□□□□ -0.57
CBWD3-204ENST00000377349 URB1-AS1Q96HZ7 61 aa11.47□□□□□ -0.57
CBWD3-204ENST00000377349 ZNF861PO60384 105 aa11.46□□□□□ -0.57
CBWD3-204ENST00000377349 ZNF22P17026 224 aaPredicted RBP11.45□□□□□ -0.58
CBWD3-204ENST00000377349 TP73-AS1Q9UF72 201 aa11.45□□□□□ -0.58
CBWD3-204ENST00000377349 TMEM170BQ5T4T1 132 aa11.44□□□□□ -0.58
CBWD3-204ENST00000377349 BAGE3Q86Y29 109 aa11.44□□□□□ -0.58
CBWD3-204ENST00000377349 LINC00167Q96N53 147 aa11.44□□□□□ -0.58
CBWD3-204ENST00000377349 ZNF625Q96I27 306 aaPredicted RBP11.43□□□□□ -0.58
CBWD3-204ENST00000377349 SCO1O75880 301 aa11.43□□□□□ -0.58
CBWD3-204ENST00000377349 RPL28P46779 137 aaKnown RBP11.43□□□□□ -0.58
CBWD3-204ENST00000377349 BCE1O60756 84 aa11.42□□□□□ -0.58
CBWD3-204ENST00000377349 IGKV2-28A0A075B6P5 120 aa11.41□□□□□ -0.58
CBWD3-204ENST00000377349 IGKV2D-28P01615 120 aa11.41□□□□□ -0.58
CBWD3-204ENST00000377349 RPL13AP40429 203 aaKnown RBP11.41□□□□□ -0.58
CBWD3-204ENST00000377349 IGLV5-39A0A0G2JS06 123 aa11.4□□□□□ -0.58
CBWD3-204ENST00000377349 C11orf86A6NJI1 115 aa11.4□□□□□ -0.58
CBWD3-204ENST00000377349 ERG28Q9UKR5 140 aa11.4□□□□□ -0.58
CBWD3-204ENST00000377349 UBE2AP49459 152 aa11.39□□□□□ -0.59
CBWD3-204ENST00000377349 CHTOPQ9Y3Y2 248 aaKnown RBP11.39□□□□□ -0.59
CBWD3-204ENST00000377349 SND1-IT1Q9HBX3 110 aa11.36□□□□□ -0.59
CBWD3-204ENST00000377349 FAT4Q6V0I7 4981 aa11.36□□□□□ -0.59
CBWD3-204ENST00000377349 A0A0U1RRA0 63 aa11.35□□□□□ -0.59
CBWD3-204ENST00000377349 PRR4Q16378 134 aa11.35□□□□□ -0.59
CBWD3-204ENST00000377349 IGLV5-37A0A075B6J1 123 aa11.35□□□□□ -0.59
CBWD3-204ENST00000377349 LCE2AQ5TA79 106 aaPredicted RBP11.35□□□□□ -0.59
CBWD3-204ENST00000377349 CBLN2Q8IUK8 224 aa11.35□□□□□ -0.59
CBWD3-204ENST00000377349 H0Y8G0 127 aa11.34□□□□□ -0.59
CBWD3-204ENST00000377349 TSPAN13O95857 204 aa11.34□□□□□ -0.59
CBWD3-204ENST00000377349 IFI27L1Q96BM0 104 aa11.34□□□□□ -0.59
CBWD3-204ENST00000377349 LINC00158P58513 81 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms