RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 MRPL23Q16540 153 aaKnown RBP13.94□□□□□ -0.18
VSX1-202ENST00000376709 C6orf226Q5I0X4 101 aa13.94□□□□□ -0.18
VSX1-202ENST00000376709 C11orf68Q9H3H3 251 aaKnown RBP13.94□□□□□ -0.18
VSX1-202ENST00000376709 PPDPFQ9H3Y8 114 aa13.94□□□□□ -0.18
VSX1-202ENST00000376709 ANGP03950 147 aaKnown RBP13.93□□□□□ -0.18
VSX1-202ENST00000376709 SIGMAR1Q99720 223 aa13.93□□□□□ -0.18
VSX1-202ENST00000376709 SHISA2Q6UWI4 295 aa13.93□□□□□ -0.18
VSX1-202ENST00000376709 ANK2Q01484 3957 aa13.92□□□□□ -0.18
VSX1-202ENST00000376709 M0QXV9 152 aa13.92□□□□□ -0.18
VSX1-202ENST00000376709 Q8N3U1 123 aa13.92□□□□□ -0.18
VSX1-202ENST00000376709 IBA57-AS1B1ANH7 110 aa13.92□□□□□ -0.18
VSX1-202ENST00000376709 TRBV10-2A0A0K0K1G8 114 aa13.9□□□□□ -0.18
VSX1-202ENST00000376709 PFN2P35080 140 aa13.9□□□□□ -0.18
VSX1-202ENST00000376709 REG3AQ06141 175 aa13.9□□□□□ -0.18
VSX1-202ENST00000376709 LST1O00453 97 aa13.89□□□□□ -0.19
VSX1-202ENST00000376709 Q8IZM0 81 aa13.89□□□□□ -0.19
VSX1-202ENST00000376709 SND1-IT1Q9HBX3 110 aa13.89□□□□□ -0.19
VSX1-202ENST00000376709 IGLV10-54A0A075B6I4 117 aa13.89□□□□□ -0.19
VSX1-202ENST00000376709 CD164L2Q6UWJ8 174 aa13.89□□□□□ -0.19
VSX1-202ENST00000376709 CDIP1Q9H305 208 aa13.89□□□□□ -0.19
VSX1-202ENST00000376709 NTN5Q8WTR8 489 aaPredicted RBP13.88□□□□□ -0.19
VSX1-202ENST00000376709 CHCHD10Q8WYQ3 142 aaPredicted RBP13.88□□□□□ -0.19
VSX1-202ENST00000376709 DNAH3Q8TD57 4116 aa13.88□□□□□ -0.19
VSX1-202ENST00000376709 EGFEM1PQ0D2K5 195 aa13.88□□□□□ -0.19
VSX1-202ENST00000376709 LELP1Q5T871 98 aa13.88□□□□□ -0.19
VSX1-202ENST00000376709 LINC01561Q8N1V8 128 aa13.88□□□□□ -0.19
VSX1-202ENST00000376709 TRAV13-2A0A0B4J235 113 aa13.87□□□□□ -0.19
VSX1-202ENST00000376709 COX7A2LO14548 114 aa13.87□□□□□ -0.19
VSX1-202ENST00000376709 CRPP02741 224 aa13.87□□□□□ -0.19
VSX1-202ENST00000376709 RETNQ9HD89 108 aa13.87□□□□□ -0.19
VSX1-202ENST00000376709 COL6A5A8TX70 2615 aa13.87□□□□□ -0.19
VSX1-202ENST00000376709 C2orf82Q6UX34 121 aa13.86□□□□□ -0.19
VSX1-202ENST00000376709 CKS1BP61024 79 aa13.85□□□□□ -0.19
VSX1-202ENST00000376709 MALP21145 153 aa13.85□□□□□ -0.19
VSX1-202ENST00000376709 CCL18P55774 89 aa13.85□□□□□ -0.19
VSX1-202ENST00000376709 LINC01600Q96MT4 127 aa13.84□□□□□ -0.19
VSX1-202ENST00000376709 TEX49A0A1B0GTD5 131 aa13.83□□□□□ -0.2
VSX1-202ENST00000376709 H3BT86 120 aa13.83□□□□□ -0.2
VSX1-202ENST00000376709 LINC00337Q8N6G1 96 aa13.83□□□□□ -0.2
VSX1-202ENST00000376709 IGKV2-28A0A075B6P5 120 aa13.82□□□□□ -0.2
VSX1-202ENST00000376709 IGKV2D-28P01615 120 aa13.82□□□□□ -0.2
VSX1-202ENST00000376709 CFAP161Q6P656 301 aa13.82□□□□□ -0.2
VSX1-202ENST00000376709 UBE2WQ96B02 151 aa13.8□□□□□ -0.2
VSX1-202ENST00000376709 CXCL5P42830 114 aa13.79□□□□□ -0.2
VSX1-202ENST00000376709 XGP55808 180 aa13.79□□□□□ -0.2
VSX1-202ENST00000376709 LYPD5Q6UWN5 251 aa13.79□□□□□ -0.2
VSX1-202ENST00000376709 KLK12Q9UKR0 248 aa13.79□□□□□ -0.2
VSX1-202ENST00000376709 KIAA0087Q14695 138 aa13.78□□□□□ -0.2
VSX1-202ENST00000376709 SCGB1A1P11684 91 aa13.78□□□□□ -0.2
VSX1-202ENST00000376709 RPL28P46779 137 aaKnown RBP13.78□□□□□ -0.2
VSX1-202ENST00000376709 MT-ATP8P03928 68 aa13.77□□□□□ -0.21
VSX1-202ENST00000376709 NOTCH1P46531 2555 aa13.77□□□□□ -0.21
VSX1-202ENST00000376709 Q6ZTC4 211 aa13.76□□□□□ -0.21
VSX1-202ENST00000376709 KPRPQ5T749 579 aaPredicted RBP13.76□□□□□ -0.21
VSX1-202ENST00000376709 PRR34Q9NV39 138 aa13.75□□□□□ -0.21
VSX1-202ENST00000376709 TENM3Q9P273 2699 aa13.74□□□□□ -0.21
VSX1-202ENST00000376709 H3BNG1 76 aa13.74□□□□□ -0.21
VSX1-202ENST00000376709 COX17Q14061 63 aa13.74□□□□□ -0.21
VSX1-202ENST00000376709 SMIM11BQ8TCY0 68 aa13.74□□□□□ -0.21
VSX1-202ENST00000376709 TRACP01848 142 aa13.73□□□□□ -0.21
VSX1-202ENST00000376709 OR13C6PQ8NH95 151 aa13.73□□□□□ -0.21
VSX1-202ENST00000376709 FAM218AQ96MZ4 157 aa13.73□□□□□ -0.21
VSX1-202ENST00000376709 ENHOQ6UWT2 76 aa13.72□□□□□ -0.21
VSX1-202ENST00000376709 NBEAL1Q6ZS30 2694 aa13.71□□□□□ -0.21
VSX1-202ENST00000376709 A0A0J9YWU9 116 aa13.71□□□□□ -0.22
VSX1-202ENST00000376709 SPAG11BQ08648 103 aa13.71□□□□□ -0.22
VSX1-202ENST00000376709 C9orf116Q5BN46 136 aaPredicted RBP13.71□□□□□ -0.22
VSX1-202ENST00000376709 KLK5Q9Y337 293 aaPredicted RBP13.71□□□□□ -0.22
VSX1-202ENST00000376709 TRAV8-4A0A0B4J246 113 aa13.69□□□□□ -0.22
VSX1-202ENST00000376709 WFDC10BQ8IUB3 73 aa13.69□□□□□ -0.22
VSX1-202ENST00000376709 PRB2P02812 416 aaPredicted RBP13.69□□□□□ -0.22
VSX1-202ENST00000376709 C6orf223Q8N319 242 aa13.68□□□□□ -0.22
VSX1-202ENST00000376709 NANOS2P60321 138 aaKnown RBP13.67□□□□□ -0.22
VSX1-202ENST00000376709 C11orf45Q8TAV5 145 aa13.66□□□□□ -0.22
VSX1-202ENST00000376709 LINC00526Q96FQ7 95 aa13.66□□□□□ -0.22
VSX1-202ENST00000376709 BAALC-AS2P0C853 105 aa13.66□□□□□ -0.22
VSX1-202ENST00000376709 H0YGX0 51 aa13.65□□□□□ -0.22
VSX1-202ENST00000376709 UNQ6190/PRO20217Q6UXQ8 127 aa13.65□□□□□ -0.22
VSX1-202ENST00000376709 Q9HAA7 133 aa13.65□□□□□ -0.22
VSX1-202ENST00000376709 DNAL4O96015 105 aa13.65□□□□□ -0.22
VSX1-202ENST00000376709 C10orf25Q5T742 122 aa13.65□□□□□ -0.22
VSX1-202ENST00000376709 DEFB131BA0A096LNP1 70 aa13.64□□□□□ -0.23
VSX1-202ENST00000376709 PRR3P79522 188 aaKnown RBP13.64□□□□□ -0.23
VSX1-202ENST00000376709 A0A087WYN8 130 aa13.64□□□□□ -0.23
VSX1-202ENST00000376709 NDUFC2O95298 119 aa13.64□□□□□ -0.23
VSX1-202ENST00000376709 DEFB121Q5J5C9 76 aa13.64□□□□□ -0.23
VSX1-202ENST00000376709 ESRGQ1W209 222 aa13.62□□□□□ -0.23
VSX1-202ENST00000376709 C22orf24Q9Y442 160 aa13.6□□□□□ -0.23
VSX1-202ENST00000376709 MUC7Q8TAX7 377 aa13.59□□□□□ -0.23
VSX1-202ENST00000376709 TMEM126AQ9H061 195 aa13.59□□□□□ -0.23
VSX1-202ENST00000376709 NCR3O14931 201 aa13.58□□□□□ -0.24
VSX1-202ENST00000376709 LECT2O14960 151 aa13.58□□□□□ -0.24
VSX1-202ENST00000376709 SNCGO76070 127 aa13.57□□□□□ -0.24
VSX1-202ENST00000376709 FAM240AA0A1B0GVK7 77 aa13.56□□□□□ -0.24
VSX1-202ENST00000376709 K7EIL1 84 aa13.56□□□□□ -0.24
VSX1-202ENST00000376709 MGAM2Q2M2H8 2515 aa13.56□□□□□ -0.24
VSX1-202ENST00000376709 C15orf53Q8NAA6 179 aa13.56□□□□□ -0.24
VSX1-202ENST00000376709 ZNF561-AS1K7EIQ3 104 aa13.55□□□□□ -0.24
VSX1-202ENST00000376709 Q8NDZ9 215 aa13.55□□□□□ -0.24
VSX1-202ENST00000376709 MRAPQ8TCY5 172 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms