RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 ADCYAP1P18509 176 aa8.91□□□□□ -0.98
HDAC6-204ENST00000376643 C9orf129Q5T035 196 aaKnown RBP8.91□□□□□ -0.98
HDAC6-204ENST00000376643 TIMM17AQ99595 171 aa8.91□□□□□ -0.98
HDAC6-204ENST00000376643 IGIPA6NJ69 53 aa8.9□□□□□ -0.98
HDAC6-204ENST00000376643 F8VRH5 84 aa8.9□□□□□ -0.98
HDAC6-204ENST00000376643 ZNF861PO60384 105 aa8.9□□□□□ -0.98
HDAC6-204ENST00000376643 TP73-AS1Q9UF72 201 aa8.9□□□□□ -0.98
HDAC6-204ENST00000376643 LINC00173Q6ZV60 143 aa8.89□□□□□ -0.99
HDAC6-204ENST00000376643 COMMD7Q86VX2 200 aa8.89□□□□□ -0.99
HDAC6-204ENST00000376643 KRTAP11-1Q8IUC1 163 aa8.89□□□□□ -0.99
HDAC6-204ENST00000376643 KRTAP7-1Q8IUC3 87 aa8.88□□□□□ -0.99
HDAC6-204ENST00000376643 KRTAP1-4P0C5Y4 121 aa8.87□□□□□ -0.99
HDAC6-204ENST00000376643 RPL28P46779 137 aaKnown RBP8.87□□□□□ -0.99
HDAC6-204ENST00000376643 TOMM6Q96B49 74 aa8.87□□□□□ -0.99
HDAC6-204ENST00000376643 C22orf24Q9Y442 160 aa8.87□□□□□ -0.99
HDAC6-204ENST00000376643 TRAV9-1A0A075B6T8 112 aa8.86□□□□□ -0.99
HDAC6-204ENST00000376643 ERASQ7Z444 233 aa8.86□□□□□ -0.99
HDAC6-204ENST00000376643 CDKN2A-AS1Q9UH64 79 aa8.86□□□□□ -0.99
HDAC6-204ENST00000376643 RNF213Q63HN8 5207 aa8.85□□□□□ -0.99
HDAC6-204ENST00000376643 PDZD11Q5EBL8 140 aa8.85□□□□□ -0.99
HDAC6-204ENST00000376643 MRPL55Q7Z7F7 128 aaKnown RBP8.85□□□□□ -0.99
HDAC6-204ENST00000376643 LINC00469Q8N7U9 141 aa8.85□□□□□ -0.99
HDAC6-204ENST00000376643 XAGE1AQ9HD64 81 aa8.85□□□□□ -0.99
HDAC6-204ENST00000376643 ZC2HC1BQ5TFG8 222 aa8.84□□□□□ -0.99
HDAC6-204ENST00000376643 SCGB3A1Q96QR1 104 aa8.84□□□□□ -0.99
HDAC6-204ENST00000376643 TINCRA0A1B0GVN0 87 aa8.83□□□□□ -1
HDAC6-204ENST00000376643 TMEM218A2RU14 115 aa8.83□□□□□ -1
HDAC6-204ENST00000376643 BCE1O60756 84 aa8.83□□□□□ -1
HDAC6-204ENST00000376643 PRR4Q16378 134 aa8.83□□□□□ -1
HDAC6-204ENST00000376643 S100PP25815 95 aa8.82□□□□□ -1
HDAC6-204ENST00000376643 COX19Q49B96 90 aa8.82□□□□□ -1
HDAC6-204ENST00000376643 SLC7A5P1Q8MH63 180 aa8.82□□□□□ -1
HDAC6-204ENST00000376643 COX7B2Q8TF08 81 aa8.82□□□□□ -1
HDAC6-204ENST00000376643 MRPL18Q9H0U6 180 aaKnown RBP8.82□□□□□ -1
HDAC6-204ENST00000376643 H3BRM9 83 aa8.81□□□□□ -1
HDAC6-204ENST00000376643 UQCC3Q6UW78 93 aa8.81□□□□□ -1
HDAC6-204ENST00000376643 IGLV5-45A0A087WSX0 123 aa8.8□□□□□ -1
HDAC6-204ENST00000376643 A0A0U1RQV1 116 aa8.8□□□□□ -1
HDAC6-204ENST00000376643 SMIM1B2RUZ4 78 aa8.8□□□□□ -1
HDAC6-204ENST00000376643 CRYGAP11844 174 aa8.8□□□□□ -1
HDAC6-204ENST00000376643 ATP5LO75964 103 aa8.79□□□□□ -1
HDAC6-204ENST00000376643 NKAPP1Q8N9T2 125 aa8.79□□□□□ -1
HDAC6-204ENST00000376643 PMVKQ15126 192 aa8.78□□□□□ -1
HDAC6-204ENST00000376643 C10orf91Q5T1B1 145 aa8.78□□□□□ -1
HDAC6-204ENST00000376643 GNB1LQ9BYB4 327 aa8.78□□□□□ -1
HDAC6-204ENST00000376643 SMCO4Q9NRQ5 59 aa8.78□□□□□ -1
HDAC6-204ENST00000376643 IGLV5-37A0A075B6J1 123 aa8.77□□□□□ -1.01
HDAC6-204ENST00000376643 LINC01546A6NGU7 62 aa8.77□□□□□ -1.01
HDAC6-204ENST00000376643 KIAA1644Q3SXP7 199 aa8.77□□□□□ -1.01
HDAC6-204ENST00000376643 FA2HQ7L5A8 372 aa8.77□□□□□ -1.01
HDAC6-204ENST00000376643 TYMSOSQ8TAI1 123 aa8.77□□□□□ -1.01
HDAC6-204ENST00000376643 CST9LQ9H4G1 147 aa8.77□□□□□ -1.01
HDAC6-204ENST00000376643 UBE2AP49459 152 aa8.76□□□□□ -1.01
HDAC6-204ENST00000376643 SFTA2Q6UW10 78 aa8.76□□□□□ -1.01
HDAC6-204ENST00000376643 LINC00167Q96N53 147 aa8.76□□□□□ -1.01
HDAC6-204ENST00000376643 SEC11CQ9BY50 192 aa8.75□□□□□ -1.01
HDAC6-204ENST00000376643 RPL37AP8A6NKH3 93 aa8.73□□□□□ -1.01
HDAC6-204ENST00000376643 SPINK8P0C7L1 97 aa8.73□□□□□ -1.01
HDAC6-204ENST00000376643 CTAG1AP78358 180 aa8.73□□□□□ -1.01
HDAC6-204ENST00000376643 FAM229BQ4G0N7 80 aa8.73□□□□□ -1.01
HDAC6-204ENST00000376643 GAGE10A6NGK3 116 aa8.72□□□□□ -1.01
HDAC6-204ENST00000376643 TSPAN13O95857 204 aa8.72□□□□□ -1.01
HDAC6-204ENST00000376643 RAB5BP61020 215 aa8.72□□□□□ -1.01
HDAC6-204ENST00000376643 RPL24P83731 157 aaKnown RBP8.72□□□□□ -1.01
HDAC6-204ENST00000376643 COX17Q14061 63 aa8.72□□□□□ -1.01
HDAC6-204ENST00000376643 A0A087X002 238 aa8.7□□□□□ -1.02
HDAC6-204ENST00000376643 IGLC3P0DOY3 106 aa8.7□□□□□ -1.02
HDAC6-204ENST00000376643 FABP9Q0Z7S8 132 aa8.7□□□□□ -1.02
HDAC6-204ENST00000376643 LPAP08519 4548 aa8.7□□□□□ -1.02
HDAC6-204ENST00000376643 APOC3P02656 99 aa8.69□□□□□ -1.02
HDAC6-204ENST00000376643 IGKV2D-26A0A0A0MRZ7 120 aa8.68□□□□□ -1.02
HDAC6-204ENST00000376643 IGLV5-39A0A0G2JS06 123 aa8.68□□□□□ -1.02
HDAC6-204ENST00000376643 PFN2P35080 140 aa8.68□□□□□ -1.02
HDAC6-204ENST00000376643 NDUFA6P56556 154 aa8.68□□□□□ -1.02
HDAC6-204ENST00000376643 RHEBQ15382 184 aa8.68□□□□□ -1.02
HDAC6-204ENST00000376643 KRTAP13-1Q8IUC0 172 aa8.68□□□□□ -1.02
HDAC6-204ENST00000376643 IGKV2-28A0A075B6P5 120 aa8.67□□□□□ -1.02
HDAC6-204ENST00000376643 IGKV2D-28P01615 120 aa8.67□□□□□ -1.02
HDAC6-204ENST00000376643 LINC00304Q8N9R0 145 aa8.67□□□□□ -1.02
HDAC6-204ENST00000376643 ERG28Q9UKR5 140 aa8.67□□□□□ -1.02
HDAC6-204ENST00000376643 HBDP02042 147 aa8.66□□□□□ -1.02
HDAC6-204ENST00000376643 FAM19A1Q7Z5A9 133 aa8.66□□□□□ -1.02
HDAC6-204ENST00000376643 RPS10P5Q9NQ39 176 aa8.66□□□□□ -1.02
HDAC6-204ENST00000376643 SND1-IT1Q9HBX3 110 aa8.65□□□□□ -1.02
HDAC6-204ENST00000376643 LINC00614P0C842 121 aa8.64□□□□□ -1.03
HDAC6-204ENST00000376643 VPREB1P12018 145 aa8.64□□□□□ -1.03
HDAC6-204ENST00000376643 ZNF22P17026 224 aaPredicted RBP8.64□□□□□ -1.03
HDAC6-204ENST00000376643 TMEM126AQ9H061 195 aa8.64□□□□□ -1.03
HDAC6-204ENST00000376643 TRAPPC1Q9Y5R8 145 aa8.63□□□□□ -1.03
HDAC6-204ENST00000376643 TMEM170BQ5T4T1 132 aa8.62□□□□□ -1.03
HDAC6-204ENST00000376643 YPEL4Q96NS1 127 aa8.62□□□□□ -1.03
HDAC6-204ENST00000376643 PRLHP81277 87 aa8.61□□□□□ -1.03
HDAC6-204ENST00000376643 KRTAP13-2Q52LG2 175 aa8.61□□□□□ -1.03
HDAC6-204ENST00000376643 SPAG11AQ6PDA7 123 aa8.61□□□□□ -1.03
HDAC6-204ENST00000376643 BAGE3Q86Y29 109 aa8.61□□□□□ -1.03
HDAC6-204ENST00000376643 ANAPC11Q9NYG5 84 aa8.61□□□□□ -1.03
HDAC6-204ENST00000376643 ZNF706Q9Y5V0 76 aaPredicted RBP8.61□□□□□ -1.03
HDAC6-204ENST00000376643 CBLN2Q8IUK8 224 aa8.6□□□□□ -1.03
HDAC6-204ENST00000376643 SVBPQ8N300 66 aa8.6□□□□□ -1.03
HDAC6-204ENST00000376643 C18orf32Q8TCD1 76 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms