RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 CXCL5P42830 114 aa13.81□□□□□ -0.2
C9orf47-202ENST00000375850 PNRC1Q12796 327 aaPredicted RBP13.81□□□□□ -0.2
C9orf47-202ENST00000375850 F8VRH5 84 aa13.8□□□□□ -0.2
C9orf47-202ENST00000375850 RPL28P46779 137 aaKnown RBP13.8□□□□□ -0.2
C9orf47-202ENST00000375850 NXT2Q9NPJ8 142 aaKnown RBP13.8□□□□□ -0.2
C9orf47-202ENST00000375850 LINC00469Q8N7U9 141 aa13.79□□□□□ -0.2
C9orf47-202ENST00000375850 ANAPC16Q96DE5 110 aa13.79□□□□□ -0.2
C9orf47-202ENST00000375850 CTDSP1Q9GZU7 261 aa13.79□□□□□ -0.2
C9orf47-202ENST00000375850 XAGE1AQ9HD64 81 aa13.79□□□□□ -0.2
C9orf47-202ENST00000375850 ZC2HC1BQ5TFG8 222 aa13.78□□□□□ -0.2
C9orf47-202ENST00000375850 MRPL55Q7Z7F7 128 aaKnown RBP13.78□□□□□ -0.2
C9orf47-202ENST00000375850 GEMIN7Q9H840 131 aaKnown RBP13.78□□□□□ -0.2
C9orf47-202ENST00000375850 MT-ND4LP03901 98 aa13.77□□□□□ -0.21
C9orf47-202ENST00000375850 TIMM17AQ99595 171 aa13.77□□□□□ -0.21
C9orf47-202ENST00000375850 BCE1O60756 84 aa13.76□□□□□ -0.21
C9orf47-202ENST00000375850 CDKN2A-AS1Q9UH64 79 aa13.76□□□□□ -0.21
C9orf47-202ENST00000375850 CRYGAP11844 174 aa13.74□□□□□ -0.21
C9orf47-202ENST00000375850 TOMM6Q96B49 74 aa13.71□□□□□ -0.21
C9orf47-202ENST00000375850 LINC01549A6NIU2 74 aa13.7□□□□□ -0.22
C9orf47-202ENST00000375850 TYMSOSQ8TAI1 123 aa13.7□□□□□ -0.22
C9orf47-202ENST00000375850 TSPAN13O95857 204 aa13.69□□□□□ -0.22
C9orf47-202ENST00000375850 PDZD11Q5EBL8 140 aa13.69□□□□□ -0.22
C9orf47-202ENST00000375850 ERASQ7Z444 233 aa13.69□□□□□ -0.22
C9orf47-202ENST00000375850 A0A087X002 238 aa13.68□□□□□ -0.22
C9orf47-202ENST00000375850 SMIM1B2RUZ4 78 aa13.67□□□□□ -0.22
C9orf47-202ENST00000375850 LINC00167Q96N53 147 aa13.67□□□□□ -0.22
C9orf47-202ENST00000375850 TINCRA0A1B0GVN0 87 aa13.66□□□□□ -0.22
C9orf47-202ENST00000375850 COX7B2Q8TF08 81 aa13.66□□□□□ -0.22
C9orf47-202ENST00000375850 IGLV5-37A0A075B6J1 123 aa13.65□□□□□ -0.22
C9orf47-202ENST00000375850 SCGB3A1Q96QR1 104 aa13.65□□□□□ -0.22
C9orf47-202ENST00000375850 MUC2Q02817 5179 aa13.65□□□□□ -0.22
C9orf47-202ENST00000375850 IGLV5-45A0A087WSX0 123 aa13.64□□□□□ -0.23
C9orf47-202ENST00000375850 A0A1B0GVG6 124 aa13.64□□□□□ -0.23
C9orf47-202ENST00000375850 RPL37AP8A6NKH3 93 aa13.62□□□□□ -0.23
C9orf47-202ENST00000375850 FAM229BQ4G0N7 80 aa13.62□□□□□ -0.23
C9orf47-202ENST00000375850 NKAPP1Q8N9T2 125 aa13.62□□□□□ -0.23
C9orf47-202ENST00000375850 UBE2AP49459 152 aa13.61□□□□□ -0.23
C9orf47-202ENST00000375850 RAB14P61106 215 aa13.6□□□□□ -0.23
C9orf47-202ENST00000375850 CTAG1AP78358 180 aa13.6□□□□□ -0.23
C9orf47-202ENST00000375850 KRTAP13-1Q8IUC0 172 aa13.6□□□□□ -0.23
C9orf47-202ENST00000375850 MRPL18Q9H0U6 180 aaKnown RBP13.6□□□□□ -0.23
C9orf47-202ENST00000375850 TRAV9-1A0A075B6T8 112 aa13.58□□□□□ -0.24
C9orf47-202ENST00000375850 GAGE10A6NGK3 116 aa13.58□□□□□ -0.24
C9orf47-202ENST00000375850 H3BRM9 83 aa13.57□□□□□ -0.24
C9orf47-202ENST00000375850 ATP5LO75964 103 aa13.57□□□□□ -0.24
C9orf47-202ENST00000375850 CST9LQ9H4G1 147 aa13.57□□□□□ -0.24
C9orf47-202ENST00000375850 LINC01546A6NGU7 62 aa13.55□□□□□ -0.24
C9orf47-202ENST00000375850 ADCYAP1P18509 176 aa13.55□□□□□ -0.24
C9orf47-202ENST00000375850 RAB5BP61020 215 aa13.55□□□□□ -0.24
C9orf47-202ENST00000375850 PMVKQ15126 192 aa13.55□□□□□ -0.24
C9orf47-202ENST00000375850 KIAA1644Q3SXP7 199 aa13.55□□□□□ -0.24
C9orf47-202ENST00000375850 LINC00304Q8N9R0 145 aa13.55□□□□□ -0.24
C9orf47-202ENST00000375850 SPINK8P0C7L1 97 aa13.54□□□□□ -0.24
C9orf47-202ENST00000375850 KRTAP13-2Q52LG2 175 aa13.54□□□□□ -0.24
C9orf47-202ENST00000375850 ANAPC11Q9NYG5 84 aa13.53□□□□□ -0.24
C9orf47-202ENST00000375850 IGKV2D-26A0A0A0MRZ7 120 aa13.52□□□□□ -0.25
C9orf47-202ENST00000375850 GNB1LQ9BYB4 327 aa13.51□□□□□ -0.25
C9orf47-202ENST00000375850 IGKV2-28A0A075B6P5 120 aa13.5□□□□□ -0.25
C9orf47-202ENST00000375850 IGKV2D-28P01615 120 aa13.5□□□□□ -0.25
C9orf47-202ENST00000375850 TPRXLQ17RH7 258 aa13.5□□□□□ -0.25
C9orf47-202ENST00000375850 COX19Q49B96 90 aa13.49□□□□□ -0.25
C9orf47-202ENST00000375850 RPL24P83731 157 aaKnown RBP13.48□□□□□ -0.25
C9orf47-202ENST00000375850 FA2HQ7L5A8 372 aa13.48□□□□□ -0.25
C9orf47-202ENST00000375850 S100PP25815 95 aa13.47□□□□□ -0.25
C9orf47-202ENST00000375850 COX17Q14061 63 aa13.47□□□□□ -0.25
C9orf47-202ENST00000375850 CDIP1Q9H305 208 aa13.47□□□□□ -0.25
C9orf47-202ENST00000375850 SMCO4Q9NRQ5 59 aa13.47□□□□□ -0.25
C9orf47-202ENST00000375850 IGLV5-39A0A0G2JS06 123 aa13.46□□□□□ -0.25
C9orf47-202ENST00000375850 PFN2P35080 140 aa13.46□□□□□ -0.25
C9orf47-202ENST00000375850 SFTA2Q6UW10 78 aa13.46□□□□□ -0.25
C9orf47-202ENST00000375850 TMEM126AQ9H061 195 aa13.46□□□□□ -0.25
C9orf47-202ENST00000375850 IGLC3P0DOY3 106 aa13.45□□□□□ -0.26
C9orf47-202ENST00000375850 VPREB1P12018 145 aa13.45□□□□□ -0.26
C9orf47-202ENST00000375850 FAM19A1Q7Z5A9 133 aa13.45□□□□□ -0.26
C9orf47-202ENST00000375850 RETNLBQ9BQ08 111 aa13.45□□□□□ -0.26
C9orf47-202ENST00000375850 KRTAP9-2Q9BYQ4 174 aa13.45□□□□□ -0.26
C9orf47-202ENST00000375850 PRLHP81277 87 aa13.44□□□□□ -0.26
C9orf47-202ENST00000375850 LCE2AQ5TA79 106 aaPredicted RBP13.44□□□□□ -0.26
C9orf47-202ENST00000375850 UQCC3Q6UW78 93 aa13.44□□□□□ -0.26
C9orf47-202ENST00000375850 SND1-IT1Q9HBX3 110 aa13.44□□□□□ -0.26
C9orf47-202ENST00000375850 ERG28Q9UKR5 140 aa13.44□□□□□ -0.26
C9orf47-202ENST00000375850 IGLV7-46A0A075B6I9 117 aa13.43□□□□□ -0.26
C9orf47-202ENST00000375850 CLLU1Q5K131 121 aa13.43□□□□□ -0.26
C9orf47-202ENST00000375850 SCO1O75880 301 aa13.42□□□□□ -0.26
C9orf47-202ENST00000375850 SPAG11AQ6PDA7 123 aa13.4□□□□□ -0.26
C9orf47-202ENST00000375850 TMEM218A2RU14 115 aa13.39□□□□□ -0.27
C9orf47-202ENST00000375850 TMEM238C9JI98 176 aa13.39□□□□□ -0.27
C9orf47-202ENST00000375850 M0R378 163 aa13.39□□□□□ -0.27
C9orf47-202ENST00000375850 ZNF22P17026 224 aaPredicted RBP13.39□□□□□ -0.27
C9orf47-202ENST00000375850 PLEKHB2Q96CS7 222 aa13.39□□□□□ -0.27
C9orf47-202ENST00000375850 CBLN2Q8IUK8 224 aa13.38□□□□□ -0.27
C9orf47-202ENST00000375850 NDUFA6P56556 154 aa13.37□□□□□ -0.27
C9orf47-202ENST00000375850 FABP9Q0Z7S8 132 aa13.37□□□□□ -0.27
C9orf47-202ENST00000375850 SEC11CQ9BY50 192 aa13.36□□□□□ -0.27
C9orf47-202ENST00000375850 FAT4Q6V0I7 4981 aa13.34□□□□□ -0.27
C9orf47-202ENST00000375850 HIGD2AQ9BW72 106 aa13.33□□□□□ -0.28
C9orf47-202ENST00000375850 PPDPFQ9H3Y8 114 aa13.33□□□□□ -0.28
C9orf47-202ENST00000375850 ZNF706Q9Y5V0 76 aaPredicted RBP13.33□□□□□ -0.28
C9orf47-202ENST00000375850 HBDP02042 147 aa13.32□□□□□ -0.28
C9orf47-202ENST00000375850 FP248Q71RG6 208 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms