RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 C5orf38Q86SI9 138 aa8.39□□□□□ -1.07
HMGCL-202ENST00000374487 A0A087WZ39 114 aa8.38□□□□□ -1.07
HMGCL-202ENST00000374487 IGHV4-30-4P0DP06 118 aa8.38□□□□□ -1.07
HMGCL-202ENST00000374487 SS18Q15532 418 aa8.38□□□□□ -1.07
HMGCL-202ENST00000374487 ATP5G1P05496 136 aa8.38□□□□□ -1.07
HMGCL-202ENST00000374487 SPART-AS1P0CW21 52 aa8.37□□□□□ -1.07
HMGCL-202ENST00000374487 XCL1P47992 114 aa8.37□□□□□ -1.07
HMGCL-202ENST00000374487 LINC01620Q4KN68 170 aa8.37□□□□□ -1.07
HMGCL-202ENST00000374487 SOSTDC1Q6X4U4 206 aa8.37□□□□□ -1.07
HMGCL-202ENST00000374487 Q8NAQ8 132 aa8.37□□□□□ -1.07
HMGCL-202ENST00000374487 PPDPFLQ8WWR9 84 aa8.37□□□□□ -1.07
HMGCL-202ENST00000374487 HUWE1Q7Z6Z7 4374 aaKnown RBP8.37□□□□□ -1.07
HMGCL-202ENST00000374487 TRAV26-1A0A087WT03 109 aa8.37□□□□□ -1.07
HMGCL-202ENST00000374487 GAGE12HA6NDE8 117 aa8.37□□□□□ -1.07
HMGCL-202ENST00000374487 CLPSL2Q6UWE3 100 aa8.37□□□□□ -1.07
HMGCL-202ENST00000374487 ANKRD29Q8N6D5 301 aa8.36□□□□□ -1.07
HMGCL-202ENST00000374487 CELA1Q9UNI1 258 aa8.36□□□□□ -1.07
HMGCL-202ENST00000374487 HTN3P15516 51 aa8.35□□□□□ -1.07
HMGCL-202ENST00000374487 LINC00158P58513 81 aa8.35□□□□□ -1.07
HMGCL-202ENST00000374487 C6orf226Q5I0X4 101 aa8.35□□□□□ -1.07
HMGCL-202ENST00000374487 MIR7-3HGQ8N6C7 128 aa8.35□□□□□ -1.07
HMGCL-202ENST00000374487 CLEC2BQ92478 149 aa8.35□□□□□ -1.07
HMGCL-202ENST00000374487 M0QXV9 152 aa8.34□□□□□ -1.07
HMGCL-202ENST00000374487 LINC00269Q8N2A0 174 aa8.34□□□□□ -1.07
HMGCL-202ENST00000374487 CARD19Q96LW7 228 aa8.34□□□□□ -1.08
HMGCL-202ENST00000374487 SIGMAR1Q99720 223 aa8.34□□□□□ -1.08
HMGCL-202ENST00000374487 B9D2Q9BPU9 175 aa8.34□□□□□ -1.08
HMGCL-202ENST00000374487 TRBV10-2A0A0K0K1G8 114 aa8.33□□□□□ -1.08
HMGCL-202ENST00000374487 ANGP03950 147 aaKnown RBP8.33□□□□□ -1.08
HMGCL-202ENST00000374487 MRPL23Q16540 153 aaKnown RBP8.33□□□□□ -1.08
HMGCL-202ENST00000374487 C11orf68Q9H3H3 251 aaKnown RBP8.33□□□□□ -1.08
HMGCL-202ENST00000374487 PPDPFQ9H3Y8 114 aa8.33□□□□□ -1.08
HMGCL-202ENST00000374487 IBA57-AS1B1ANH7 110 aa8.32□□□□□ -1.08
HMGCL-202ENST00000374487 PFN2P35080 140 aa8.32□□□□□ -1.08
HMGCL-202ENST00000374487 SPATA25Q9BR10 227 aa8.32□□□□□ -1.08
HMGCL-202ENST00000374487 LST1O00453 97 aa8.32□□□□□ -1.08
HMGCL-202ENST00000374487 SND1-IT1Q9HBX3 110 aa8.32□□□□□ -1.08
HMGCL-202ENST00000374487 C2orf82Q6UX34 121 aa8.31□□□□□ -1.08
HMGCL-202ENST00000374487 RETNQ9HD89 108 aa8.31□□□□□ -1.08
HMGCL-202ENST00000374487 TRAV13-2A0A0B4J235 113 aa8.31□□□□□ -1.08
HMGCL-202ENST00000374487 CRPP02741 224 aa8.3□□□□□ -1.08
HMGCL-202ENST00000374487 REG3AQ06141 175 aa8.3□□□□□ -1.08
HMGCL-202ENST00000374487 NTN5Q8WTR8 489 aaPredicted RBP8.3□□□□□ -1.08
HMGCL-202ENST00000374487 IGLV10-54A0A075B6I4 117 aa8.29□□□□□ -1.08
HMGCL-202ENST00000374487 COX7A2LO14548 114 aa8.29□□□□□ -1.08
HMGCL-202ENST00000374487 CKS1BP61024 79 aa8.29□□□□□ -1.08
HMGCL-202ENST00000374487 CD164L2Q6UWJ8 174 aa8.29□□□□□ -1.08
HMGCL-202ENST00000374487 Q8IZM0 81 aa8.29□□□□□ -1.08
HMGCL-202ENST00000374487 CHCHD10Q8WYQ3 142 aaPredicted RBP8.29□□□□□ -1.08
HMGCL-202ENST00000374487 TENM3Q9P273 2699 aa8.29□□□□□ -1.08
HMGCL-202ENST00000374487 MALP21145 153 aa8.29□□□□□ -1.08
HMGCL-202ENST00000374487 Q8N3U1 123 aa8.29□□□□□ -1.08
HMGCL-202ENST00000374487 H3BT86 120 aa8.28□□□□□ -1.08
HMGCL-202ENST00000374487 LINC01561Q8N1V8 128 aa8.28□□□□□ -1.08
HMGCL-202ENST00000374487 CCL18P55774 89 aa8.28□□□□□ -1.08
HMGCL-202ENST00000374487 LELP1Q5T871 98 aa8.28□□□□□ -1.08
HMGCL-202ENST00000374487 LINC01600Q96MT4 127 aa8.28□□□□□ -1.08
HMGCL-202ENST00000374487 TEX49A0A1B0GTD5 131 aa8.27□□□□□ -1.09
HMGCL-202ENST00000374487 CFAP161Q6P656 301 aa8.27□□□□□ -1.09
HMGCL-202ENST00000374487 LINC00337Q8N6G1 96 aa8.27□□□□□ -1.09
HMGCL-202ENST00000374487 UBE2WQ96B02 151 aa8.27□□□□□ -1.09
HMGCL-202ENST00000374487 IGKV2-28A0A075B6P5 120 aa8.26□□□□□ -1.09
HMGCL-202ENST00000374487 IGKV2D-28P01615 120 aa8.26□□□□□ -1.09
HMGCL-202ENST00000374487 CDIP1Q9H305 208 aa8.25□□□□□ -1.09
HMGCL-202ENST00000374487 TM2D3Q9BRN9 247 aa8.25□□□□□ -1.09
HMGCL-202ENST00000374487 RPL28P46779 137 aaKnown RBP8.24□□□□□ -1.09
HMGCL-202ENST00000374487 CXCL5P42830 114 aa8.24□□□□□ -1.09
HMGCL-202ENST00000374487 OR13C6PQ8NH95 151 aa8.24□□□□□ -1.09
HMGCL-202ENST00000374487 KLK12Q9UKR0 248 aa8.24□□□□□ -1.09
HMGCL-202ENST00000374487 LYPD5Q6UWN5 251 aa8.23□□□□□ -1.09
HMGCL-202ENST00000374487 TRACP01848 142 aa8.22□□□□□ -1.09
HMGCL-202ENST00000374487 KIAA0087Q14695 138 aa8.22□□□□□ -1.09
HMGCL-202ENST00000374487 SMIM11BQ8TCY0 68 aa8.22□□□□□ -1.09
HMGCL-202ENST00000374487 NHLRC4P0CG21 123 aaPredicted RBP8.22□□□□□ -1.09
HMGCL-202ENST00000374487 SCGB1A1P11684 91 aa8.22□□□□□ -1.09
HMGCL-202ENST00000374487 COX17Q14061 63 aa8.22□□□□□ -1.09
HMGCL-202ENST00000374487 TRAV8-4A0A0B4J246 113 aa8.21□□□□□ -1.1
HMGCL-202ENST00000374487 STAB2Q8WWQ8 2551 aa8.2□□□□□ -1.1
HMGCL-202ENST00000374487 XGP55808 180 aa8.2□□□□□ -1.1
HMGCL-202ENST00000374487 Q6ZTC4 211 aa8.2□□□□□ -1.1
HMGCL-202ENST00000374487 FAM218AQ96MZ4 157 aa8.2□□□□□ -1.1
HMGCL-202ENST00000374487 PRR34Q9NV39 138 aa8.2□□□□□ -1.1
HMGCL-202ENST00000374487 H3BNG1 76 aa8.2□□□□□ -1.1
HMGCL-202ENST00000374487 KLK5Q9Y337 293 aaPredicted RBP8.2□□□□□ -1.1
HMGCL-202ENST00000374487 MT-ATP8P03928 68 aa8.19□□□□□ -1.1
HMGCL-202ENST00000374487 BAALC-AS2P0C853 105 aa8.19□□□□□ -1.1
HMGCL-202ENST00000374487 SPAG11BQ08648 103 aa8.19□□□□□ -1.1
HMGCL-202ENST00000374487 H0YGX0 51 aa8.18□□□□□ -1.1
HMGCL-202ENST00000374487 C9orf116Q5BN46 136 aaPredicted RBP8.18□□□□□ -1.1
HMGCL-202ENST00000374487 ENHOQ6UWT2 76 aa8.18□□□□□ -1.1
HMGCL-202ENST00000374487 DNAL4O96015 105 aa8.18□□□□□ -1.1
HMGCL-202ENST00000374487 DNAH7Q8WXX0 4024 aa8.17□□□□□ -1.1
HMGCL-202ENST00000374487 Q9HAA7 133 aa8.17□□□□□ -1.1
HMGCL-202ENST00000374487 A0A0J9YWU9 116 aa8.17□□□□□ -1.1
HMGCL-202ENST00000374487 PRR3P79522 188 aaKnown RBP8.17□□□□□ -1.1
HMGCL-202ENST00000374487 C6orf223Q8N319 242 aa8.17□□□□□ -1.1
HMGCL-202ENST00000374487 WWC2-AS2Q96NR7 200 aa8.17□□□□□ -1.1
HMGCL-202ENST00000374487 UNQ6190/PRO20217Q6UXQ8 127 aa8.16□□□□□ -1.1
HMGCL-202ENST00000374487 WFDC10BQ8IUB3 73 aa8.16□□□□□ -1.1
HMGCL-202ENST00000374487 LINC00526Q96FQ7 95 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms