RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 TMEM243Q9BU79 118 aa9.67□□□□□ -0.86
USP49-201ENST00000373006 CRYGAP11844 174 aa9.67□□□□□ -0.86
USP49-201ENST00000373006 PLA2G2AP14555 144 aa9.67□□□□□ -0.86
USP49-201ENST00000373006 A0A0U1RQV1 116 aa9.66□□□□□ -0.86
USP49-201ENST00000373006 CXCL5P42830 114 aa9.66□□□□□ -0.86
USP49-201ENST00000373006 TRBV10-1A0A0K0K1A3 114 aa9.66□□□□□ -0.86
USP49-201ENST00000373006 LECT2O14960 151 aa9.66□□□□□ -0.86
USP49-201ENST00000373006 CCL18P55774 89 aa9.66□□□□□ -0.86
USP49-201ENST00000373006 NBPF19A0A087WUL8 3843 aa9.66□□□□□ -0.86
USP49-201ENST00000373006 F8WDY8 70 aa9.65□□□□□ -0.86
USP49-201ENST00000373006 PF4P02776 101 aa9.65□□□□□ -0.86
USP49-201ENST00000373006 RPL35AP18077 110 aaKnown RBP9.65□□□□□ -0.86
USP49-201ENST00000373006 IGLV4-60A0A075B6I1 120 aa9.65□□□□□ -0.87
USP49-201ENST00000373006 APCP25054 2843 aa9.64□□□□□ -0.87
USP49-201ENST00000373006 TRGV2A0A075B6R0 118 aa9.64□□□□□ -0.87
USP49-201ENST00000373006 PAX4O43316 350 aa9.64□□□□□ -0.87
USP49-201ENST00000373006 SERP2Q8N6R1 65 aa9.64□□□□□ -0.87
USP49-201ENST00000373006 FHL2Q14192 279 aa9.64□□□□□ -0.87
USP49-201ENST00000373006 ZNF843Q8N446 348 aa9.64□□□□□ -0.87
USP49-201ENST00000373006 C4orf3Q8WVX3 66 aa9.64□□□□□ -0.87
USP49-201ENST00000373006 GCN1Q92616 2671 aaKnown RBP9.64□□□□□ -0.87
USP49-201ENST00000373006 GHRHP01286 108 aa9.63□□□□□ -0.87
USP49-201ENST00000373006 IL17DQ8TAD2 202 aa9.63□□□□□ -0.87
USP49-201ENST00000373006 DSCR9P59020 149 aa9.63□□□□□ -0.87
USP49-201ENST00000373006 MRAPQ8TCY5 172 aa9.63□□□□□ -0.87
USP49-201ENST00000373006 SEC61GP60059 68 aa9.63□□□□□ -0.87
USP49-201ENST00000373006 A0A096LNT2 108 aa9.62□□□□□ -0.87
USP49-201ENST00000373006 TMEM258P61165 79 aa9.62□□□□□ -0.87
USP49-201ENST00000373006 IGHV4-31P0DP07 118 aa9.61□□□□□ -0.87
USP49-201ENST00000373006 FAM19A1Q7Z5A9 133 aa9.61□□□□□ -0.87
USP49-201ENST00000373006 LINC01561Q8N1V8 128 aa9.61□□□□□ -0.87
USP49-201ENST00000373006 WFDC10AQ9H1F0 79 aa9.61□□□□□ -0.87
USP49-201ENST00000373006 ITPR2Q14571 2701 aa9.61□□□□□ -0.87
USP49-201ENST00000373006 SNURFQ9Y675 71 aa9.61□□□□□ -0.87
USP49-201ENST00000373006 ENHOQ6UWT2 76 aa9.6□□□□□ -0.87
USP49-201ENST00000373006 IGHV3OR16-9A0A0B4J2B5 98 aa9.59□□□□□ -0.87
USP49-201ENST00000373006 TRGV4A0A0C4DH28 118 aa9.59□□□□□ -0.87
USP49-201ENST00000373006 H0YGX0 51 aa9.59□□□□□ -0.87
USP49-201ENST00000373006 LINC00336Q6ZUF6 198 aa9.59□□□□□ -0.87
USP49-201ENST00000373006 Q5XG85 94 aa9.59□□□□□ -0.87
USP49-201ENST00000373006 OVOL2Q9BRP0 275 aa9.59□□□□□ -0.87
USP49-201ENST00000373006 RPS28P62857 69 aaKnown RBP9.59□□□□□ -0.87
USP49-201ENST00000373006 PRR3P79522 188 aaKnown RBP9.58□□□□□ -0.88
USP49-201ENST00000373006 C6orf226Q5I0X4 101 aa9.58□□□□□ -0.88
USP49-201ENST00000373006 FSHBP01225 129 aa9.57□□□□□ -0.88
USP49-201ENST00000373006 IBA57-AS1B1ANH7 110 aa9.57□□□□□ -0.88
USP49-201ENST00000373006 GIG44P09565 113 aaPredicted RBP9.57□□□□□ -0.88
USP49-201ENST00000373006 PLAC8L1A1L4L8 177 aa9.56□□□□□ -0.88
USP49-201ENST00000373006 TRBV6-8A0A0A6YYG3 113 aa9.56□□□□□ -0.88
USP49-201ENST00000373006 XCL1P47992 114 aa9.56□□□□□ -0.88
USP49-201ENST00000373006 OBSCN-AS1Q96MR7 158 aa9.56□□□□□ -0.88
USP49-201ENST00000373006 CR1P17927 2039 aa9.55□□□□□ -0.88
USP49-201ENST00000373006 CLPSL2Q6UWE3 100 aa9.55□□□□□ -0.88
USP49-201ENST00000373006 Q6JHZ5 121 aa9.55□□□□□ -0.88
USP49-201ENST00000373006 BRK1Q8WUW1 75 aa9.55□□□□□ -0.88
USP49-201ENST00000373006 A0A087WZ39 114 aa9.55□□□□□ -0.88
USP49-201ENST00000373006 SS18Q15532 418 aa9.54□□□□□ -0.88
USP49-201ENST00000373006 ORMDL1Q9P0S3 153 aa9.54□□□□□ -0.88
USP49-201ENST00000373006 TRBV6-4A0A1B0GX49 114 aa9.54□□□□□ -0.88
USP49-201ENST00000373006 CCL24O00175 119 aa9.53□□□□□ -0.88
USP49-201ENST00000373006 FLNBO75369 2602 aaKnown RBP9.53□□□□□ -0.88
USP49-201ENST00000373006 UBR5O95071 2799 aaPredicted RBP9.53□□□□□ -0.88
USP49-201ENST00000373006 FAM236DA0A1B0GTK5 79 aa9.52□□□□□ -0.89
USP49-201ENST00000373006 LINC00959A0A1B0GUT2 108 aa9.52□□□□□ -0.89
USP49-201ENST00000373006 FAM236CP0DP71 79 aa9.52□□□□□ -0.89
USP49-201ENST00000373006 HAMPP81172 84 aa9.52□□□□□ -0.89
USP49-201ENST00000373006 UPK3BQ9BT76 320 aa9.52□□□□□ -0.89
USP49-201ENST00000373006 PRO0628Q9UI54 55 aa9.52□□□□□ -0.89
USP49-201ENST00000373006 TENM4Q6N022 2769 aa9.52□□□□□ -0.89
USP49-201ENST00000373006 DEFB130BP0DP73 79 aa9.52□□□□□ -0.89
USP49-201ENST00000373006 DEFB130AP0DP74 79 aa9.52□□□□□ -0.89
USP49-201ENST00000373006 C16orf74Q96GX8 76 aa9.52□□□□□ -0.89
USP49-201ENST00000373006 MPLKIPQ8TAP9 179 aa9.51□□□□□ -0.89
USP49-201ENST00000373006 A0A096LPF7 62 aa9.51□□□□□ -0.89
USP49-201ENST00000373006 RBM3P98179 157 aaKnown RBP9.51□□□□□ -0.89
USP49-201ENST00000373006 CCKP06307 115 aa9.5□□□□□ -0.89
USP49-201ENST00000373006 SCXQ7RTU7 201 aa9.5□□□□□ -0.89
USP49-201ENST00000373006 V9GYY9 64 aa9.5□□□□□ -0.89
USP49-201ENST00000373006 DEFB113Q30KQ7 82 aa9.49□□□□□ -0.89
USP49-201ENST00000373006 LINC00474Q9P2X8 69 aa9.49□□□□□ -0.89
USP49-201ENST00000373006 RMI2Q96E14 147 aa9.49□□□□□ -0.89
USP49-201ENST00000373006 TMEM86BQ8N661 226 aa9.49□□□□□ -0.89
USP49-201ENST00000373006 NANOS2P60321 138 aaKnown RBP9.48□□□□□ -0.89
USP49-201ENST00000373006 S100A7L2Q5SY68 101 aa9.48□□□□□ -0.89
USP49-201ENST00000373006 LY6G6DO95868 133 aa9.47□□□□□ -0.89
USP49-201ENST00000373006 Q8N814 137 aa9.47□□□□□ -0.89
USP49-201ENST00000373006 DNAJC9-AS1A6NH13 148 aa9.47□□□□□ -0.89
USP49-201ENST00000373006 C9orf116Q5BN46 136 aaPredicted RBP9.47□□□□□ -0.89
USP49-201ENST00000373006 UNC79Q9P2D8 2635 aa9.47□□□□□ -0.89
USP49-201ENST00000373006 CSNK1G2-AS1Q8NCQ2 148 aa9.46□□□□□ -0.9
USP49-201ENST00000373006 ESM1Q9NQ30 184 aa9.46□□□□□ -0.9
USP49-201ENST00000373006 IGLV10-54A0A075B6I4 117 aa9.45□□□□□ -0.9
USP49-201ENST00000373006 GYPEP15421 78 aa9.45□□□□□ -0.9
USP49-201ENST00000373006 F8WEM9 126 aa9.44□□□□□ -0.9
USP49-201ENST00000373006 VWFP04275 2813 aa9.44□□□□□ -0.9
USP49-201ENST00000373006 JMJD7-PLA2G4BH0Y9G9 81 aa9.43□□□□□ -0.9
USP49-201ENST00000373006 TMEM256-PLSCR3K7ERE1 68 aa9.43□□□□□ -0.9
USP49-201ENST00000373006 C6orf99Q4VX62 202 aa9.43□□□□□ -0.9
USP49-201ENST00000373006 C19orf73Q9NVV2 129 aa9.43□□□□□ -0.9
USP49-201ENST00000373006 PRB2P02812 416 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms