RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 MPLKIPQ8TAP9 179 aa6.31□□□□□ -1.4
ATG4A-203ENST00000372232 SNURFQ9Y675 71 aa6.31□□□□□ -1.4
ATG4A-203ENST00000372232 ZFAND2AQ8N6M9 145 aa6.3□□□□□ -1.4
ATG4A-203ENST00000372232 WFDC9Q8NEX5 89 aa6.3□□□□□ -1.4
ATG4A-203ENST00000372232 TRAV21A0A0B4J279 112 aa6.3□□□□□ -1.4
ATG4A-203ENST00000372232 RNASE3P12724 160 aaKnown RBP6.3□□□□□ -1.4
ATG4A-203ENST00000372232 DEFB1P60022 68 aa6.3□□□□□ -1.4
ATG4A-203ENST00000372232 ZNF625Q96I27 306 aaPredicted RBP6.3□□□□□ -1.4
ATG4A-203ENST00000372232 SETXQ7Z333 2677 aaKnown RBP6.29□□□□□ -1.4
ATG4A-203ENST00000372232 K7EMT4 169 aa6.29□□□□□ -1.4
ATG4A-203ENST00000372232 NAV2Q8IVL1 2488 aa6.29□□□□□ -1.4
ATG4A-203ENST00000372232 IGKV3-7A0A075B6H7 116 aa6.28□□□□□ -1.4
ATG4A-203ENST00000372232 SEC61BP60468 96 aaKnown RBP6.28□□□□□ -1.4
ATG4A-203ENST00000372232 C10orf99Q6UWK7 81 aa6.28□□□□□ -1.4
ATG4A-203ENST00000372232 SOSTDC1Q6X4U4 206 aa6.28□□□□□ -1.4
ATG4A-203ENST00000372232 MRPL55Q7Z7F7 128 aaKnown RBP6.28□□□□□ -1.4
ATG4A-203ENST00000372232 MXRA5Q9NR99 2828 aa6.28□□□□□ -1.4
ATG4A-203ENST00000372232 F6UB75 175 aa6.28□□□□□ -1.4
ATG4A-203ENST00000372232 KRTAP10-9P60411 292 aa6.28□□□□□ -1.4
ATG4A-203ENST00000372232 FAM104AQ969W3 186 aa6.28□□□□□ -1.4
ATG4A-203ENST00000372232 ABCA12Q86UK0 2595 aa6.28□□□□□ -1.4
ATG4A-203ENST00000372232 FSHBP01225 129 aa6.27□□□□□ -1.41
ATG4A-203ENST00000372232 HOXD3P31249 432 aaPredicted RBP6.27□□□□□ -1.41
ATG4A-203ENST00000372232 ESRGQ1W209 222 aa6.27□□□□□ -1.41
ATG4A-203ENST00000372232 ODF3L2Q3SX64 289 aa6.27□□□□□ -1.41
ATG4A-203ENST00000372232 Q6YL49 198 aa6.27□□□□□ -1.41
ATG4A-203ENST00000372232 IGHV4-31P0DP07 118 aa6.27□□□□□ -1.41
ATG4A-203ENST00000372232 NCR3O14931 201 aa6.26□□□□□ -1.41
ATG4A-203ENST00000372232 CD28P10747 220 aa6.26□□□□□ -1.41
ATG4A-203ENST00000372232 MIFP14174 115 aa6.26□□□□□ -1.41
ATG4A-203ENST00000372232 A0A087WYN8 130 aa6.26□□□□□ -1.41
ATG4A-203ENST00000372232 C6orf223Q8N319 242 aa6.26□□□□□ -1.41
ATG4A-203ENST00000372232 CREBBPQ92793 2442 aa6.26□□□□□ -1.41
ATG4A-203ENST00000372232 NBPF19A0A087WUL8 3843 aa6.26□□□□□ -1.41
ATG4A-203ENST00000372232 TRBV7-4A0A0J9YYF1 115 aa6.25□□□□□ -1.41
ATG4A-203ENST00000372232 DEFB113Q30KQ7 82 aa6.25□□□□□ -1.41
ATG4A-203ENST00000372232 KLLNB2CW77 178 aa6.25□□□□□ -1.41
ATG4A-203ENST00000372232 H0YGX0 51 aa6.25□□□□□ -1.41
ATG4A-203ENST00000372232 GNRH2O43555 120 aa6.25□□□□□ -1.41
ATG4A-203ENST00000372232 DAD1P61803 113 aa6.25□□□□□ -1.41
ATG4A-203ENST00000372232 LINC00476Q8WZB0 136 aa6.25□□□□□ -1.41
ATG4A-203ENST00000372232 ZNF702PQ9H963 129 aa6.25□□□□□ -1.41
ATG4A-203ENST00000372232 TEX15Q9BXT5 2789 aa6.24□□□□□ -1.41
ATG4A-203ENST00000372232 M0QY20 66 aa6.24□□□□□ -1.41
ATG4A-203ENST00000372232 MIR7-3HGQ8N6C7 128 aa6.24□□□□□ -1.41
ATG4A-203ENST00000372232 TM2D3Q9BRN9 247 aa6.24□□□□□ -1.41
ATG4A-203ENST00000372232 UBL5Q9BZL1 73 aa6.24□□□□□ -1.41
ATG4A-203ENST00000372232 ITPR2Q14571 2701 aa6.24□□□□□ -1.41
ATG4A-203ENST00000372232 TRAV10A0A0B4J240 114 aa6.24□□□□□ -1.41
ATG4A-203ENST00000372232 ZNF469Q96JG9 3925 aaPredicted RBP6.23□□□□□ -1.41
ATG4A-203ENST00000372232 IGLV5-45A0A087WSX0 123 aa6.23□□□□□ -1.41
ATG4A-203ENST00000372232 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.23□□□□□ -1.41
ATG4A-203ENST00000372232 APCP25054 2843 aa6.23□□□□□ -1.41
ATG4A-203ENST00000372232 IGKV2-29A2NJV5 120 aaPredicted RBP6.22□□□□□ -1.41
ATG4A-203ENST00000372232 UBE2E2Q96LR5 201 aa6.22□□□□□ -1.41
ATG4A-203ENST00000372232 RBM12B-AS1Q9P1G2 102 aa6.22□□□□□ -1.41
ATG4A-203ENST00000372232 MUC4Q99102 2169 aa6.22□□□□□ -1.41
ATG4A-203ENST00000372232 JMJD7-PLA2G4BH0Y9G9 81 aa6.22□□□□□ -1.41
ATG4A-203ENST00000372232 Q1T7F1 81 aa6.22□□□□□ -1.41
ATG4A-203ENST00000372232 ORMDL1Q9P0S3 153 aa6.22□□□□□ -1.41
ATG4A-203ENST00000372232 Q9UF83 564 aa6.22□□□□□ -1.41
ATG4A-203ENST00000372232 NOTCH2Q04721 2471 aa6.22□□□□□ -1.41
ATG4A-203ENST00000372232 IGLV5-39A0A0G2JS06 123 aa6.21□□□□□ -1.41
ATG4A-203ENST00000372232 K7EQG2 157 aa6.21□□□□□ -1.41
ATG4A-203ENST00000372232 ERC2-IT1O76042 136 aa6.21□□□□□ -1.41
ATG4A-203ENST00000372232 CRPP02741 224 aa6.21□□□□□ -1.41
ATG4A-203ENST00000372232 C11orf72Q8NBR9 251 aa6.21□□□□□ -1.41
ATG4A-203ENST00000372232 KRTAP1-3Q8IUG1 177 aa6.21□□□□□ -1.42
ATG4A-203ENST00000372232 CR1P17927 2039 aa6.2□□□□□ -1.42
ATG4A-203ENST00000372232 LECT2O14960 151 aa6.2□□□□□ -1.42
ATG4A-203ENST00000372232 MYO9AB2RTY4 2548 aa6.2□□□□□ -1.42
ATG4A-203ENST00000372232 A0A087WZ39 114 aa6.2□□□□□ -1.42
ATG4A-203ENST00000372232 CYSRT1A8MQ03 144 aa6.2□□□□□ -1.42
ATG4A-203ENST00000372232 KTN1-AS1Q86SY8 53 aa6.2□□□□□ -1.42
ATG4A-203ENST00000372232 SMIM11BQ8TCY0 68 aa6.2□□□□□ -1.42
ATG4A-203ENST00000372232 DYNLRB2Q8TF09 96 aa6.2□□□□□ -1.42
ATG4A-203ENST00000372232 CDKN2A-AS1Q9UH64 79 aa6.2□□□□□ -1.42
ATG4A-203ENST00000372232 AKAP9Q99996 3911 aa6.19□□□□□ -1.42
ATG4A-203ENST00000372232 Q6ZTC4 211 aa6.19□□□□□ -1.42
ATG4A-203ENST00000372232 LINC00337Q8N6G1 96 aa6.19□□□□□ -1.42
ATG4A-203ENST00000372232 TMEM254Q8TBM7 123 aa6.19□□□□□ -1.42
ATG4A-203ENST00000372232 TLN2Q9Y4G6 2542 aa6.19□□□□□ -1.42
ATG4A-203ENST00000372232 IGKV3-20P01619 116 aa6.19□□□□□ -1.42
ATG4A-203ENST00000372232 C18orf65Q6ZTR6 163 aa6.19□□□□□ -1.42
ATG4A-203ENST00000372232 LINC00167Q96N53 147 aa6.19□□□□□ -1.42
ATG4A-203ENST00000372232 DEFB136Q30KP8 78 aa6.18□□□□□ -1.42
ATG4A-203ENST00000372232 RNASE13Q5GAN3 156 aaKnown RBP6.18□□□□□ -1.42
ATG4A-203ENST00000372232 FAM74A4Q5TZK3 123 aa6.18□□□□□ -1.42
ATG4A-203ENST00000372232 MAST4O15021 2626 aa6.18□□□□□ -1.42
ATG4A-203ENST00000372232 PDZD2O15018 2839 aa6.18□□□□□ -1.42
ATG4A-203ENST00000372232 IGKV2-28A0A075B6P5 120 aa6.17□□□□□ -1.42
ATG4A-203ENST00000372232 IGHV3-16A0A0C4DH30 117 aa6.17□□□□□ -1.42
ATG4A-203ENST00000372232 IGKV2D-28P01615 120 aa6.17□□□□□ -1.42
ATG4A-203ENST00000372232 LINC01547P58512 204 aaPredicted RBP6.17□□□□□ -1.42
ATG4A-203ENST00000372232 C11orf45Q8TAV5 145 aa6.17□□□□□ -1.42
ATG4A-203ENST00000372232 C11orf68Q9H3H3 251 aaKnown RBP6.17□□□□□ -1.42
ATG4A-203ENST00000372232 ITPR3Q14573 2671 aa6.17□□□□□ -1.42
ATG4A-203ENST00000372232 FUSP35637 526 aaKnown RBP eCLIP6.17□□□□□ -1.42
ATG4A-203ENST00000372232 SPINK13Q1W4C9 94 aa6.17□□□□□ -1.42
ATG4A-203ENST00000372232 SLPIP03973 132 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms