RNA–Protein interactions for RNA: ENST00000369660.8

UBL4A-202, Transcript of ubiquitin like 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL4A, Length 2,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4A-202ENST00000369660 H3BUT2 72 aa12.84□□□□□ -0.35
UBL4A-202ENST00000369660 DNAH10OSP0CZ25 163 aa12.83□□□□□ -0.36
UBL4A-202ENST00000369660 MIAQ16674 131 aa12.83□□□□□ -0.36
UBL4A-202ENST00000369660 SFTA2Q6UW10 78 aa12.83□□□□□ -0.36
UBL4A-202ENST00000369660 CIRBPQ14011 172 aaKnown RBP12.83□□□□□ -0.36
UBL4A-202ENST00000369660 CKS1BP61024 79 aa12.82□□□□□ -0.36
UBL4A-202ENST00000369660 C9orf116Q5BN46 136 aaPredicted RBP12.82□□□□□ -0.36
UBL4A-202ENST00000369660 APLNQ9ULZ1 77 aa12.82□□□□□ -0.36
UBL4A-202ENST00000369660 DYNC2H1Q8NCM8 4307 aaKnown RBP12.82□□□□□ -0.36
UBL4A-202ENST00000369660 CFC1BP0CG36 223 aa12.81□□□□□ -0.36
UBL4A-202ENST00000369660 CFC1P0CG37 223 aa12.81□□□□□ -0.36
UBL4A-202ENST00000369660 KIAA0087Q14695 138 aa12.81□□□□□ -0.36
UBL4A-202ENST00000369660 HIGD2BQ4VC39 106 aa12.81□□□□□ -0.36
UBL4A-202ENST00000369660 Q8IZM0 81 aa12.81□□□□□ -0.36
UBL4A-202ENST00000369660 DNAH10Q8IVF4 4471 aa12.81□□□□□ -0.36
UBL4A-202ENST00000369660 DNAH1Q9P2D7 4330 aa12.81□□□□□ -0.36
UBL4A-202ENST00000369660 LINC00158P58513 81 aa12.81□□□□□ -0.36
UBL4A-202ENST00000369660 C1orf43Q9BWL3 253 aa12.81□□□□□ -0.36
UBL4A-202ENST00000369660 TRAV8-4A0A0B4J246 113 aa12.8□□□□□ -0.36
UBL4A-202ENST00000369660 CFAP161Q6P656 301 aa12.8□□□□□ -0.36
UBL4A-202ENST00000369660 TMEM238LA0A1B0GVL6 79 aa12.8□□□□□ -0.36
UBL4A-202ENST00000369660 A6NJY4 79 aa12.8□□□□□ -0.36
UBL4A-202ENST00000369660 HERV-K104P63124 156 aa12.8□□□□□ -0.36
UBL4A-202ENST00000369660 SPAG11BQ08648 103 aa12.8□□□□□ -0.36
UBL4A-202ENST00000369660 UBE2DNLQ8IWF7 75 aa12.8□□□□□ -0.36
UBL4A-202ENST00000369660 SPANXDQ9BXN6 97 aa12.8□□□□□ -0.36
UBL4A-202ENST00000369660 SPANXCQ9NY87 97 aa12.8□□□□□ -0.36
UBL4A-202ENST00000369660 KRTAP26-1Q6PEX3 210 aa12.79□□□□□ -0.36
UBL4A-202ENST00000369660 SOSTDC1Q6X4U4 206 aa12.79□□□□□ -0.36
UBL4A-202ENST00000369660 H7C2G1 150 aa12.79□□□□□ -0.36
UBL4A-202ENST00000369660 VAMP3Q15836 100 aa12.79□□□□□ -0.36
UBL4A-202ENST00000369660 C10orf25Q5T742 122 aa12.79□□□□□ -0.36
UBL4A-202ENST00000369660 MIR7-3HGQ8N6C7 128 aa12.79□□□□□ -0.36
UBL4A-202ENST00000369660 RPL24P83731 157 aaKnown RBP12.78□□□□□ -0.36
UBL4A-202ENST00000369660 C9orf118A6NHY6 69 aa12.78□□□□□ -0.36
UBL4A-202ENST00000369660 UNQ6190/PRO20217Q6UXQ8 127 aa12.78□□□□□ -0.36
UBL4A-202ENST00000369660 LINC00308Q8TCZ7 52 aa12.78□□□□□ -0.36
UBL4A-202ENST00000369660 TIMM17BO60830 172 aa12.77□□□□□ -0.37
UBL4A-202ENST00000369660 CASC10Q5T4H9 136 aa12.77□□□□□ -0.37
UBL4A-202ENST00000369660 PGPEP1Q9NXJ5 209 aa12.77□□□□□ -0.37
UBL4A-202ENST00000369660 ERG28Q9UKR5 140 aa12.76□□□□□ -0.37
UBL4A-202ENST00000369660 KRTAP1-5Q9BYS1 174 aa12.76□□□□□ -0.37
UBL4A-202ENST00000369660 A0A1B0GWB2 263 aa12.74□□□□□ -0.37
UBL4A-202ENST00000369660 LINC01561Q8N1V8 128 aa12.74□□□□□ -0.37
UBL4A-202ENST00000369660 NUPR2A6NF83 97 aa12.74□□□□□ -0.37
UBL4A-202ENST00000369660 UPK3BQ9BT76 320 aa12.74□□□□□ -0.37
UBL4A-202ENST00000369660 KLK5Q9Y337 293 aaPredicted RBP12.74□□□□□ -0.37
UBL4A-202ENST00000369660 LECT2O14960 151 aa12.73□□□□□ -0.37
UBL4A-202ENST00000369660 IBA57-AS1B1ANH7 110 aa12.73□□□□□ -0.37
UBL4A-202ENST00000369660 C15orf56Q8N910 161 aa12.72□□□□□ -0.37
UBL4A-202ENST00000369660 TSPAN13O95857 204 aa12.71□□□□□ -0.37
UBL4A-202ENST00000369660 ZNF561-AS1K7EIQ3 104 aa12.71□□□□□ -0.38
UBL4A-202ENST00000369660 PRO1854Q9UHT4 67 aa12.71□□□□□ -0.38
UBL4A-202ENST00000369660 A0A1W2PPM0 123 aa12.7□□□□□ -0.38
UBL4A-202ENST00000369660 IFITM1P13164 125 aa12.69□□□□□ -0.38
UBL4A-202ENST00000369660 KMT2AQ03164 3969 aa12.69□□□□□ -0.38
UBL4A-202ENST00000369660 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.67□□□□□ -0.38
UBL4A-202ENST00000369660 LOC107984156A0A0G2JMH3 177 aa12.67□□□□□ -0.38
UBL4A-202ENST00000369660 Q1RN00 199 aa12.67□□□□□ -0.38
UBL4A-202ENST00000369660 ARL17AQ8IVW1 177 aa12.67□□□□□ -0.38
UBL4A-202ENST00000369660 NTN5Q8WTR8 489 aaPredicted RBP12.67□□□□□ -0.38
UBL4A-202ENST00000369660 CXCL5P42830 114 aa12.67□□□□□ -0.38
UBL4A-202ENST00000369660 CAMK2N2Q96S95 79 aa12.67□□□□□ -0.38
UBL4A-202ENST00000369660 C6orf48Q9UBA6 75 aa12.66□□□□□ -0.38
UBL4A-202ENST00000369660 FABP2P12104 132 aa12.66□□□□□ -0.38
UBL4A-202ENST00000369660 SND1-IT1Q9HBX3 110 aa12.66□□□□□ -0.38
UBL4A-202ENST00000369660 A0A0B4J2C4 111 aa12.65□□□□□ -0.38
UBL4A-202ENST00000369660 Q6ZRU5 148 aa12.65□□□□□ -0.38
UBL4A-202ENST00000369660 SPCS1Q9Y6A9 102 aa12.65□□□□□ -0.38
UBL4A-202ENST00000369660 PRR3P79522 188 aaKnown RBP12.64□□□□□ -0.39
UBL4A-202ENST00000369660 GAGE10A6NGK3 116 aa12.64□□□□□ -0.39
UBL4A-202ENST00000369660 M0R2N4 97 aa12.64□□□□□ -0.39
UBL4A-202ENST00000369660 RPL13AP40429 203 aaKnown RBP12.63□□□□□ -0.39
UBL4A-202ENST00000369660 UBE2V1Q13404 147 aa12.63□□□□□ -0.39
UBL4A-202ENST00000369660 USP17L23D6RBM5 183 aa12.63□□□□□ -0.39
UBL4A-202ENST00000369660 PSMB2P49721 201 aa12.62□□□□□ -0.39
UBL4A-202ENST00000369660 XAGE1AQ9HD64 81 aa12.61□□□□□ -0.39
UBL4A-202ENST00000369660 IGKV2-28A0A075B6P5 120 aa12.61□□□□□ -0.39
UBL4A-202ENST00000369660 IGKV2D-28P01615 120 aa12.61□□□□□ -0.39
UBL4A-202ENST00000369660 WFDC2Q14508 124 aa12.61□□□□□ -0.39
UBL4A-202ENST00000369660 MTURNQ8N3F0 131 aa12.61□□□□□ -0.39
UBL4A-202ENST00000369660 LINC00337Q8N6G1 96 aa12.59□□□□□ -0.39
UBL4A-202ENST00000369660 Q8NDZ9 215 aa12.59□□□□□ -0.39
UBL4A-202ENST00000369660 COPS9Q8WXC6 57 aa12.59□□□□□ -0.39
UBL4A-202ENST00000369660 K7EP34 96 aa12.59□□□□□ -0.39
UBL4A-202ENST00000369660 SCGB1C2P0DMR2 95 aa12.59□□□□□ -0.39
UBL4A-202ENST00000369660 SLPIP03973 132 aa12.58□□□□□ -0.4
UBL4A-202ENST00000369660 MUC7Q8TAX7 377 aa12.58□□□□□ -0.4
UBL4A-202ENST00000369660 H3BMG7 143 aa12.58□□□□□ -0.4
UBL4A-202ENST00000369660 PSCAO43653 123 aa12.58□□□□□ -0.4
UBL4A-202ENST00000369660 COX17Q14061 63 aa12.58□□□□□ -0.4
UBL4A-202ENST00000369660 RMI2Q96E14 147 aa12.58□□□□□ -0.4
UBL4A-202ENST00000369660 VPS13DQ5THJ4 4388 aa12.58□□□□□ -0.4
UBL4A-202ENST00000369660 GVQW2A0A096LPI5 108 aaPredicted RBP12.57□□□□□ -0.4
UBL4A-202ENST00000369660 TRIAP1O43715 76 aa12.57□□□□□ -0.4
UBL4A-202ENST00000369660 GAGE2EQ4V326 116 aa12.56□□□□□ -0.4
UBL4A-202ENST00000369660 GAGE2DQ9UEU5 116 aa12.56□□□□□ -0.4
UBL4A-202ENST00000369660 NBDYA0A0U1RRE5 68 aa12.55□□□□□ -0.4
UBL4A-202ENST00000369660 SYCNQ0VAF6 134 aa12.55□□□□□ -0.4
UBL4A-202ENST00000369660 GTF2H5Q6ZYL4 71 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms