RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 HERV-K104P63124 156 aa9.59□□□□□ -0.87
SHC1-202ENST00000368445 REG3AQ06141 175 aa9.59□□□□□ -0.87
SHC1-202ENST00000368445 IGHV3OR16-9A0A0B4J2B5 98 aa9.58□□□□□ -0.88
SHC1-202ENST00000368445 KRTAP10-11P60412 298 aa9.58□□□□□ -0.88
SHC1-202ENST00000368445 UBE2WQ96B02 151 aa9.58□□□□□ -0.88
SHC1-202ENST00000368445 CHCHD10Q8WYQ3 142 aaPredicted RBP9.58□□□□□ -0.88
SHC1-202ENST00000368445 SND1-IT1Q9HBX3 110 aa9.57□□□□□ -0.88
SHC1-202ENST00000368445 TENM3Q9P273 2699 aa9.57□□□□□ -0.88
SHC1-202ENST00000368445 LINC00612Q8N6U2 182 aa9.57□□□□□ -0.88
SHC1-202ENST00000368445 COX7A2LO14548 114 aa9.57□□□□□ -0.88
SHC1-202ENST00000368445 CRPP02741 224 aa9.57□□□□□ -0.88
SHC1-202ENST00000368445 SOSTDC1Q6X4U4 206 aa9.57□□□□□ -0.88
SHC1-202ENST00000368445 A0A087WZ39 114 aa9.56□□□□□ -0.88
SHC1-202ENST00000368445 SHISA2Q6UWI4 295 aa9.56□□□□□ -0.88
SHC1-202ENST00000368445 TIMM17BO60830 172 aa9.55□□□□□ -0.88
SHC1-202ENST00000368445 Q6ZTC4 211 aa9.55□□□□□ -0.88
SHC1-202ENST00000368445 LINC01620Q4KN68 170 aa9.55□□□□□ -0.88
SHC1-202ENST00000368445 SMCPP49901 116 aaPredicted RBP9.55□□□□□ -0.88
SHC1-202ENST00000368445 ANKRD29Q8N6D5 301 aa9.54□□□□□ -0.88
SHC1-202ENST00000368445 NTN5Q8WTR8 489 aaPredicted RBP9.54□□□□□ -0.88
SHC1-202ENST00000368445 PRO0461Q9UI25 63 aa9.54□□□□□ -0.88
SHC1-202ENST00000368445 NANOS2P60321 138 aaKnown RBP9.54□□□□□ -0.88
SHC1-202ENST00000368445 A0A0J9YWU9 116 aa9.53□□□□□ -0.88
SHC1-202ENST00000368445 A0A1B0GUV1 79 aa9.53□□□□□ -0.88
SHC1-202ENST00000368445 KPRPQ5T749 579 aaPredicted RBP9.53□□□□□ -0.88
SHC1-202ENST00000368445 GAGE12HA6NDE8 117 aa9.52□□□□□ -0.88
SHC1-202ENST00000368445 FOXI1Q12951 378 aa9.52□□□□□ -0.88
SHC1-202ENST00000368445 C9orf116Q5BN46 136 aaPredicted RBP9.52□□□□□ -0.88
SHC1-202ENST00000368445 TRBV30A0A0K0K1B3 111 aa9.52□□□□□ -0.89
SHC1-202ENST00000368445 TEN1Q86WV5 123 aa9.51□□□□□ -0.89
SHC1-202ENST00000368445 CARD19Q96LW7 228 aa9.51□□□□□ -0.89
SHC1-202ENST00000368445 CYSRT1A8MQ03 144 aa9.51□□□□□ -0.89
SHC1-202ENST00000368445 A0A1B0GV72 72 aa9.5□□□□□ -0.89
SHC1-202ENST00000368445 CD164L2Q6UWJ8 174 aa9.5□□□□□ -0.89
SHC1-202ENST00000368445 PPDPFLQ8WWR9 84 aa9.5□□□□□ -0.89
SHC1-202ENST00000368445 CCL18P55774 89 aa9.5□□□□□ -0.89
SHC1-202ENST00000368445 LELP1Q5T871 98 aa9.5□□□□□ -0.89
SHC1-202ENST00000368445 C11orf45Q8TAV5 145 aa9.5□□□□□ -0.89
SHC1-202ENST00000368445 FAM19A3Q7Z5A8 133 aa9.5□□□□□ -0.89
SHC1-202ENST00000368445 DEFB131BA0A096LNP1 70 aa9.49□□□□□ -0.89
SHC1-202ENST00000368445 PRR3P79522 188 aaKnown RBP9.49□□□□□ -0.89
SHC1-202ENST00000368445 Q9HAA7 133 aa9.48□□□□□ -0.89
SHC1-202ENST00000368445 TEX49A0A1B0GTD5 131 aa9.48□□□□□ -0.89
SHC1-202ENST00000368445 IBA57-AS1B1ANH7 110 aa9.48□□□□□ -0.89
SHC1-202ENST00000368445 LYPD5Q6UWN5 251 aa9.48□□□□□ -0.89
SHC1-202ENST00000368445 WFDC10BQ8IUB3 73 aa9.48□□□□□ -0.89
SHC1-202ENST00000368445 C6orf223Q8N319 242 aa9.48□□□□□ -0.89
SHC1-202ENST00000368445 TRAV13-2A0A0B4J235 113 aa9.48□□□□□ -0.89
SHC1-202ENST00000368445 SPAG11BQ08648 103 aa9.48□□□□□ -0.89
SHC1-202ENST00000368445 SIGMAR1Q99720 223 aa9.47□□□□□ -0.89
SHC1-202ENST00000368445 DNAL4O96015 105 aa9.47□□□□□ -0.89
SHC1-202ENST00000368445 HIGD2BQ4VC39 106 aa9.46□□□□□ -0.89
SHC1-202ENST00000368445 LINC00337Q8N6G1 96 aa9.46□□□□□ -0.9
SHC1-202ENST00000368445 TRBV10-2A0A0K0K1G8 114 aa9.46□□□□□ -0.9
SHC1-202ENST00000368445 UNQ6190/PRO20217Q6UXQ8 127 aa9.46□□□□□ -0.9
SHC1-202ENST00000368445 IGKV2D-24A0A075B6R9 120 aa9.45□□□□□ -0.9
SHC1-202ENST00000368445 Q8IZM0 81 aa9.45□□□□□ -0.9
SHC1-202ENST00000368445 ZNF561-AS1K7EIQ3 104 aa9.44□□□□□ -0.9
SHC1-202ENST00000368445 LST1O00453 97 aa9.43□□□□□ -0.9
SHC1-202ENST00000368445 S100A7L2Q5SY68 101 aa9.43□□□□□ -0.9
SHC1-202ENST00000368445 NCR3O14931 201 aa9.43□□□□□ -0.9
SHC1-202ENST00000368445 WIPF1O43516 503 aa9.42□□□□□ -0.9
SHC1-202ENST00000368445 SMIM11BQ8TCY0 68 aa9.42□□□□□ -0.9
SHC1-202ENST00000368445 STAB2Q8WWQ8 2551 aa9.42□□□□□ -0.9
SHC1-202ENST00000368445 BAALC-AS2P0C853 105 aa9.41□□□□□ -0.9
SHC1-202ENST00000368445 C10orf25Q5T742 122 aa9.41□□□□□ -0.9
SHC1-202ENST00000368445 XAGE1AQ9HD64 81 aa9.41□□□□□ -0.9
SHC1-202ENST00000368445 ESRGQ1W209 222 aa9.41□□□□□ -0.9
SHC1-202ENST00000368445 IGKV2-28A0A075B6P5 120 aa9.41□□□□□ -0.9
SHC1-202ENST00000368445 IGKV2D-28P01615 120 aa9.41□□□□□ -0.9
SHC1-202ENST00000368445 ENHOQ6UWT2 76 aa9.4□□□□□ -0.9
SHC1-202ENST00000368445 TRAV8-4A0A0B4J246 113 aa9.4□□□□□ -0.91
SHC1-202ENST00000368445 C1orf43Q9BWL3 253 aa9.4□□□□□ -0.91
SHC1-202ENST00000368445 LECT2O14960 151 aa9.39□□□□□ -0.91
SHC1-202ENST00000368445 CAMK2N2Q96S95 79 aa9.39□□□□□ -0.91
SHC1-202ENST00000368445 SLPIP03973 132 aa9.39□□□□□ -0.91
SHC1-202ENST00000368445 CXCL5P42830 114 aa9.38□□□□□ -0.91
SHC1-202ENST00000368445 EGFEM1PQ0D2K5 195 aa9.38□□□□□ -0.91
SHC1-202ENST00000368445 FAM218AQ96MZ4 157 aa9.38□□□□□ -0.91
SHC1-202ENST00000368445 GAGE2EQ4V326 116 aa9.37□□□□□ -0.91
SHC1-202ENST00000368445 GAGE2DQ9UEU5 116 aa9.37□□□□□ -0.91
SHC1-202ENST00000368445 KIAA0087Q14695 138 aa9.37□□□□□ -0.91
SHC1-202ENST00000368445 H3BT86 120 aa9.36□□□□□ -0.91
SHC1-202ENST00000368445 RPL18AQ02543 176 aaKnown RBP9.36□□□□□ -0.91
SHC1-202ENST00000368445 SPATA25Q9BR10 227 aa9.36□□□□□ -0.91
SHC1-202ENST00000368445 MT-ATP8P03928 68 aa9.35□□□□□ -0.91
SHC1-202ENST00000368445 A0A087WYN8 130 aa9.35□□□□□ -0.91
SHC1-202ENST00000368445 RPL28P46779 137 aaKnown RBP9.34□□□□□ -0.91
SHC1-202ENST00000368445 C15orf53Q8NAA6 179 aa9.33□□□□□ -0.92
SHC1-202ENST00000368445 SNCGO76070 127 aa9.33□□□□□ -0.92
SHC1-202ENST00000368445 TMEM126AQ9H061 195 aa9.32□□□□□ -0.92
SHC1-202ENST00000368445 XGP55808 180 aa9.32□□□□□ -0.92
SHC1-202ENST00000368445 KLK5Q9Y337 293 aaPredicted RBP9.32□□□□□ -0.92
SHC1-202ENST00000368445 H0YGX0 51 aa9.32□□□□□ -0.92
SHC1-202ENST00000368445 K7EIL1 84 aa9.32□□□□□ -0.92
SHC1-202ENST00000368445 C6orf99Q4VX62 202 aa9.31□□□□□ -0.92
SHC1-202ENST00000368445 GAGE2AQ6NT46 116 aa9.31□□□□□ -0.92
SHC1-202ENST00000368445 PRR34Q9NV39 138 aa9.31□□□□□ -0.92
SHC1-202ENST00000368445 CDIP1Q9H305 208 aa9.31□□□□□ -0.92
SHC1-202ENST00000368445 TRAV10A0A0B4J240 114 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 183 ms