RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 AMELXQ99217 191 aa9.03□□□□□ -0.96
CTSD-202ENST00000367196 HERVK_113P63121 156 aa9.02□□□□□ -0.97
CTSD-202ENST00000367196 Q8IZM0 81 aa9.02□□□□□ -0.97
CTSD-202ENST00000367196 IGLV1-50A0A075B6I6 118 aa9.01□□□□□ -0.97
CTSD-202ENST00000367196 C6orf226Q5I0X4 101 aa9.01□□□□□ -0.97
CTSD-202ENST00000367196 LINC00173Q6ZV60 143 aa9.01□□□□□ -0.97
CTSD-202ENST00000367196 FAM19A3Q7Z5A8 133 aa9.01□□□□□ -0.97
CTSD-202ENST00000367196 TOMM7Q9P0U1 55 aa9.01□□□□□ -0.97
CTSD-202ENST00000367196 TIMM17AQ99595 171 aa9□□□□□ -0.97
CTSD-202ENST00000367196 ALKBH7Q9BT30 221 aaPredicted RBP9□□□□□ -0.97
CTSD-202ENST00000367196 GEMIN7Q9H840 131 aaKnown RBP9□□□□□ -0.97
CTSD-202ENST00000367196 IGIPA6NJ69 53 aa8.99□□□□□ -0.97
CTSD-202ENST00000367196 S100PP25815 95 aa8.99□□□□□ -0.97
CTSD-202ENST00000367196 C9orf129Q5T035 196 aaKnown RBP8.99□□□□□ -0.97
CTSD-202ENST00000367196 PRR26Q8N8Z3 221 aa8.99□□□□□ -0.97
CTSD-202ENST00000367196 LINC01549A6NIU2 74 aa8.98□□□□□ -0.97
CTSD-202ENST00000367196 RPL13AP40429 203 aaKnown RBP8.98□□□□□ -0.97
CTSD-202ENST00000367196 CXCL5P42830 114 aa8.98□□□□□ -0.97
CTSD-202ENST00000367196 KRTAP11-1Q8IUC1 163 aa8.98□□□□□ -0.97
CTSD-202ENST00000367196 SMCO4Q9NRQ5 59 aa8.98□□□□□ -0.97
CTSD-202ENST00000367196 F8VRH5 84 aa8.97□□□□□ -0.97
CTSD-202ENST00000367196 NUPR1O60356 82 aa8.97□□□□□ -0.97
CTSD-202ENST00000367196 LBHQ53QV2 105 aaPredicted RBP8.97□□□□□ -0.97
CTSD-202ENST00000367196 ZC2HC1BQ5TFG8 222 aa8.97□□□□□ -0.97
CTSD-202ENST00000367196 KRTAP7-1Q8IUC3 87 aa8.97□□□□□ -0.97
CTSD-202ENST00000367196 TOMM6Q96B49 74 aa8.97□□□□□ -0.97
CTSD-202ENST00000367196 TRAV9-1A0A075B6T8 112 aa8.96□□□□□ -0.98
CTSD-202ENST00000367196 SCO1O75880 301 aa8.96□□□□□ -0.98
CTSD-202ENST00000367196 CBLN2Q8IUK8 224 aa8.96□□□□□ -0.98
CTSD-202ENST00000367196 CDKN2A-AS1Q9UH64 79 aa8.96□□□□□ -0.98
CTSD-202ENST00000367196 ERASQ7Z444 233 aa8.95□□□□□ -0.98
CTSD-202ENST00000367196 LINC00469Q8N7U9 141 aa8.94□□□□□ -0.98
CTSD-202ENST00000367196 RNF213Q63HN8 5207 aa8.93□□□□□ -0.98
CTSD-202ENST00000367196 ZNF861PO60384 105 aa8.93□□□□□ -0.98
CTSD-202ENST00000367196 KRTAP1-4P0C5Y4 121 aa8.93□□□□□ -0.98
CTSD-202ENST00000367196 SCGB3A1Q96QR1 104 aa8.93□□□□□ -0.98
CTSD-202ENST00000367196 XAGE1AQ9HD64 81 aa8.93□□□□□ -0.98
CTSD-202ENST00000367196 TP73-AS1Q9UF72 201 aa8.93□□□□□ -0.98
CTSD-202ENST00000367196 C22orf24Q9Y442 160 aa8.93□□□□□ -0.98
CTSD-202ENST00000367196 PDZD11Q5EBL8 140 aa8.92□□□□□ -0.98
CTSD-202ENST00000367196 TINCRA0A1B0GVN0 87 aa8.91□□□□□ -0.98
CTSD-202ENST00000367196 KIAA1644Q3SXP7 199 aa8.91□□□□□ -0.98
CTSD-202ENST00000367196 MRPL55Q7Z7F7 128 aaKnown RBP8.91□□□□□ -0.98
CTSD-202ENST00000367196 RPL28P46779 137 aaKnown RBP8.9□□□□□ -0.98
CTSD-202ENST00000367196 COX19Q49B96 90 aa8.9□□□□□ -0.98
CTSD-202ENST00000367196 COX7B2Q8TF08 81 aa8.9□□□□□ -0.98
CTSD-202ENST00000367196 SMIM1B2RUZ4 78 aa8.89□□□□□ -0.99
CTSD-202ENST00000367196 YPEL4Q96NS1 127 aa8.89□□□□□ -0.99
CTSD-202ENST00000367196 GNB1LQ9BYB4 327 aa8.89□□□□□ -0.99
CTSD-202ENST00000367196 IGLV5-45A0A087WSX0 123 aa8.88□□□□□ -0.99
CTSD-202ENST00000367196 BCE1O60756 84 aa8.88□□□□□ -0.99
CTSD-202ENST00000367196 MRPL18Q9H0U6 180 aaKnown RBP8.88□□□□□ -0.99
CTSD-202ENST00000367196 LINC01546A6NGU7 62 aa8.87□□□□□ -0.99
CTSD-202ENST00000367196 H3BRM9 83 aa8.87□□□□□ -0.99
CTSD-202ENST00000367196 FA2HQ7L5A8 372 aa8.87□□□□□ -0.99
CTSD-202ENST00000367196 COLCA2A8K830 154 aa8.86□□□□□ -0.99
CTSD-202ENST00000367196 PMVKQ15126 192 aa8.86□□□□□ -0.99
CTSD-202ENST00000367196 CST9LQ9H4G1 147 aa8.86□□□□□ -0.99
CTSD-202ENST00000367196 ATP5LO75964 103 aa8.85□□□□□ -0.99
CTSD-202ENST00000367196 NKAPP1Q8N9T2 125 aa8.85□□□□□ -0.99
CTSD-202ENST00000367196 SPINK8P0C7L1 97 aa8.84□□□□□ -0.99
CTSD-202ENST00000367196 PRR4Q16378 134 aa8.84□□□□□ -0.99
CTSD-202ENST00000367196 LPAP08519 4548 aa8.84□□□□□ -0.99
CTSD-202ENST00000367196 LINC00167Q96N53 147 aa8.83□□□□□ -1
CTSD-202ENST00000367196 IGLV5-37A0A075B6J1 123 aa8.82□□□□□ -1
CTSD-202ENST00000367196 CRYGAP11844 174 aa8.82□□□□□ -1
CTSD-202ENST00000367196 RAB5BP61020 215 aa8.82□□□□□ -1
CTSD-202ENST00000367196 FABP9Q0Z7S8 132 aa8.82□□□□□ -1
CTSD-202ENST00000367196 RPL37AP8A6NKH3 93 aa8.81□□□□□ -1
CTSD-202ENST00000367196 TRAPPC1Q9Y5R8 145 aa8.81□□□□□ -1
CTSD-202ENST00000367196 IGLC3P0DOY3 106 aa8.8□□□□□ -1
CTSD-202ENST00000367196 UBE2AP49459 152 aa8.8□□□□□ -1
CTSD-202ENST00000367196 SFTA2Q6UW10 78 aa8.8□□□□□ -1
CTSD-202ENST00000367196 TYMSOSQ8TAI1 123 aa8.8□□□□□ -1
CTSD-202ENST00000367196 GAGE10A6NGK3 116 aa8.79□□□□□ -1
CTSD-202ENST00000367196 NDUFA6P56556 154 aa8.78□□□□□ -1
CTSD-202ENST00000367196 A0A087X002 238 aa8.77□□□□□ -1.01
CTSD-202ENST00000367196 IGLV5-39A0A0G2JS06 123 aa8.77□□□□□ -1.01
CTSD-202ENST00000367196 HBDP02042 147 aa8.77□□□□□ -1.01
CTSD-202ENST00000367196 TRGC2P03986 189 aa8.77□□□□□ -1.01
CTSD-202ENST00000367196 COX17Q14061 63 aa8.77□□□□□ -1.01
CTSD-202ENST00000367196 TSPAN13O95857 204 aa8.76□□□□□ -1.01
CTSD-202ENST00000367196 PFN2P35080 140 aa8.76□□□□□ -1.01
CTSD-202ENST00000367196 RPL24P83731 157 aaKnown RBP8.76□□□□□ -1.01
CTSD-202ENST00000367196 IGKV2-28A0A075B6P5 120 aa8.75□□□□□ -1.01
CTSD-202ENST00000367196 IGKV2D-28P01615 120 aa8.75□□□□□ -1.01
CTSD-202ENST00000367196 FAM229BQ4G0N7 80 aa8.75□□□□□ -1.01
CTSD-202ENST00000367196 ERG28Q9UKR5 140 aa8.75□□□□□ -1.01
CTSD-202ENST00000367196 LINC00614P0C842 121 aa8.74□□□□□ -1.01
CTSD-202ENST00000367196 ZNF22P17026 224 aaPredicted RBP8.74□□□□□ -1.01
CTSD-202ENST00000367196 KRTAP13-1Q8IUC0 172 aa8.74□□□□□ -1.01
CTSD-202ENST00000367196 A0A0U1RQV1 116 aa8.73□□□□□ -1.01
CTSD-202ENST00000367196 C18orf32Q8TCD1 76 aa8.73□□□□□ -1.01
CTSD-202ENST00000367196 SND1-IT1Q9HBX3 110 aa8.73□□□□□ -1.01
CTSD-202ENST00000367196 A0A096LNJ9 63 aa8.72□□□□□ -1.01
CTSD-202ENST00000367196 IGKV2D-26A0A0A0MRZ7 120 aa8.71□□□□□ -1.02
CTSD-202ENST00000367196 VPREB1P12018 145 aa8.71□□□□□ -1.02
CTSD-202ENST00000367196 TMEM170BQ5T4T1 132 aa8.71□□□□□ -1.02
CTSD-202ENST00000367196 FAM19A1Q7Z5A9 133 aa8.71□□□□□ -1.02
CTSD-202ENST00000367196 BAGE3Q86Y29 109 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 173.9 ms