RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 WFDC10BQ8IUB3 73 aa11.15□□□□□ -0.62
TRAPPC11-202ENST00000357207 C14orf177Q52M58 125 aa11.15□□□□□ -0.63
TRAPPC11-202ENST00000357207 LINC00846Q9NV44 126 aa11.14□□□□□ -0.63
TRAPPC11-202ENST00000357207 MUC4Q99102 2169 aa11.13□□□□□ -0.63
TRAPPC11-202ENST00000357207 LINC00337Q8N6G1 96 aa11.13□□□□□ -0.63
TRAPPC11-202ENST00000357207 TRBV10-3A0A0K0K1G6 114 aa11.12□□□□□ -0.63
TRAPPC11-202ENST00000357207 HILS1P60008 231 aa11.12□□□□□ -0.63
TRAPPC11-202ENST00000357207 FHL2Q14192 279 aa11.12□□□□□ -0.63
TRAPPC11-202ENST00000357207 WFDC13Q8IUB5 93 aa11.12□□□□□ -0.63
TRAPPC11-202ENST00000357207 PRR4Q16378 134 aa11.11□□□□□ -0.63
TRAPPC11-202ENST00000357207 IGLV5-39A0A0G2JS06 123 aa11.11□□□□□ -0.63
TRAPPC11-202ENST00000357207 IGLV1-51P01701 117 aa11.11□□□□□ -0.63
TRAPPC11-202ENST00000357207 SERP1Q9Y6X1 66 aa11.1□□□□□ -0.63
TRAPPC11-202ENST00000357207 Q8N3U1 123 aa11.1□□□□□ -0.63
TRAPPC11-202ENST00000357207 V9GYY9 64 aa11.1□□□□□ -0.63
TRAPPC11-202ENST00000357207 INAFM1C9JVW0 142 aa11.1□□□□□ -0.63
TRAPPC11-202ENST00000357207 SVIPQ8NHG7 77 aa11.09□□□□□ -0.63
TRAPPC11-202ENST00000357207 EGFEM1PQ0D2K5 195 aa11.09□□□□□ -0.63
TRAPPC11-202ENST00000357207 FAM19A4Q96LR4 140 aa11.09□□□□□ -0.63
TRAPPC11-202ENST00000357207 ACANP16112 2415 aa11.08□□□□□ -0.63
TRAPPC11-202ENST00000357207 CELA1Q9UNI1 258 aa11.08□□□□□ -0.64
TRAPPC11-202ENST00000357207 RPL37AP8A6NKH3 93 aa11.08□□□□□ -0.64
TRAPPC11-202ENST00000357207 SBSPONQ8IVN8 264 aa11.08□□□□□ -0.64
TRAPPC11-202ENST00000357207 Q8N2B8 174 aa11.07□□□□□ -0.64
TRAPPC11-202ENST00000357207 A0A1B0GUV1 79 aa11.07□□□□□ -0.64
TRAPPC11-202ENST00000357207 ZNF843Q8N446 348 aa11.06□□□□□ -0.64
TRAPPC11-202ENST00000357207 LOC107984640A0A0U1RRK4 108 aa11.05□□□□□ -0.64
TRAPPC11-202ENST00000357207 FAM30AQ9NZY2 134 aa11.05□□□□□ -0.64
TRAPPC11-202ENST00000357207 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC11-202ENST00000357207 C11orf72Q8NBR9 251 aa11.05□□□□□ -0.64
TRAPPC11-202ENST00000357207 PPDPFQ9H3Y8 114 aa11.04□□□□□ -0.64
TRAPPC11-202ENST00000357207 C4orf48Q5BLP8 95 aa11.03□□□□□ -0.64
TRAPPC11-202ENST00000357207 PCNTO95613 3336 aa11.03□□□□□ -0.64
TRAPPC11-202ENST00000357207 TRAV10A0A0B4J240 114 aa11.03□□□□□ -0.64
TRAPPC11-202ENST00000357207 Q6ZVQ6 151 aa11.03□□□□□ -0.64
TRAPPC11-202ENST00000357207 IGHV3OR16-9A0A0B4J2B5 98 aa11.02□□□□□ -0.64
TRAPPC11-202ENST00000357207 SHISA2Q6UWI4 295 aa11.02□□□□□ -0.64
TRAPPC11-202ENST00000357207 LINC00575Q6W349 94 aa11.02□□□□□ -0.64
TRAPPC11-202ENST00000357207 MRPL55Q7Z7F7 128 aaKnown RBP11.02□□□□□ -0.64
TRAPPC11-202ENST00000357207 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC11-202ENST00000357207 KRTAP10-9P60411 292 aa11.02□□□□□ -0.65
TRAPPC11-202ENST00000357207 C1orf137Q5JT78 98 aa11.02□□□□□ -0.65
TRAPPC11-202ENST00000357207 SOSTDC1Q6X4U4 206 aa11.01□□□□□ -0.65
TRAPPC11-202ENST00000357207 IGLV5-45A0A087WSX0 123 aa11.01□□□□□ -0.65
TRAPPC11-202ENST00000357207 A8MTW9 85 aa11□□□□□ -0.65
TRAPPC11-202ENST00000357207 A0A0J9YWU9 116 aa11□□□□□ -0.65
TRAPPC11-202ENST00000357207 C6orf223Q8N319 242 aa11□□□□□ -0.65
TRAPPC11-202ENST00000357207 IGHV4-30-4P0DP06 118 aa11□□□□□ -0.65
TRAPPC11-202ENST00000357207 LINC01561Q8N1V8 128 aa11□□□□□ -0.65
TRAPPC11-202ENST00000357207 Q9UF83 564 aa11□□□□□ -0.65
TRAPPC11-202ENST00000357207 ANKRD17O75179 2603 aaKnown RBP10.99□□□□□ -0.65
TRAPPC11-202ENST00000357207 LY6G6DO95868 133 aa10.99□□□□□ -0.65
TRAPPC11-202ENST00000357207 C1orf195Q5TG92 126 aa10.99□□□□□ -0.65
TRAPPC11-202ENST00000357207 PRYO14603 147 aa10.98□□□□□ -0.65
TRAPPC11-202ENST00000357207 PLA2G2AP14555 144 aa10.98□□□□□ -0.65
TRAPPC11-202ENST00000357207 LINC01547P58512 204 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC11-202ENST00000357207 FASNP49327 2511 aaKnown RBP10.98□□□□□ -0.65
TRAPPC11-202ENST00000357207 CRYGAP11844 174 aa10.97□□□□□ -0.65
TRAPPC11-202ENST00000357207 LRCOL1A6NCL2 159 aa10.97□□□□□ -0.65
TRAPPC11-202ENST00000357207 A6NED7 52 aa10.97□□□□□ -0.65
TRAPPC11-202ENST00000357207 TMEM254Q8TBM7 123 aa10.96□□□□□ -0.65
TRAPPC11-202ENST00000357207 FAM218AQ96MZ4 157 aa10.96□□□□□ -0.65
TRAPPC11-202ENST00000357207 SEC61GP60059 68 aa10.95□□□□□ -0.66
TRAPPC11-202ENST00000357207 LINC00208Q96KT6 92 aa10.95□□□□□ -0.66
TRAPPC11-202ENST00000357207 Q8N9L7 120 aa10.94□□□□□ -0.66
TRAPPC11-202ENST00000357207 NANOS2P60321 138 aaKnown RBP10.93□□□□□ -0.66
TRAPPC11-202ENST00000357207 OXLD1Q5BKU9 147 aa10.93□□□□□ -0.66
TRAPPC11-202ENST00000357207 CASC2Q6XLA1 102 aa10.93□□□□□ -0.66
TRAPPC11-202ENST00000357207 SPINK6Q6UWN8 80 aa10.91□□□□□ -0.66
TRAPPC11-202ENST00000357207 CXCL6P80162 114 aa10.91□□□□□ -0.66
TRAPPC11-202ENST00000357207 KLK9Q2XQG4 91 aa10.91□□□□□ -0.66
TRAPPC11-202ENST00000357207 IL17DQ8TAD2 202 aa10.89□□□□□ -0.67
TRAPPC11-202ENST00000357207 C2orf48Q96LS8 159 aa10.89□□□□□ -0.67
TRAPPC11-202ENST00000357207 LITAFQ99732 161 aa10.89□□□□□ -0.67
TRAPPC11-202ENST00000357207 C16orf95Q9H693 158 aa10.89□□□□□ -0.67
TRAPPC11-202ENST00000357207 Q6ZTC4 211 aa10.88□□□□□ -0.67
TRAPPC11-202ENST00000357207 COL4A2P08572 1712 aa10.88□□□□□ -0.67
TRAPPC11-202ENST00000357207 RPS28P62857 69 aaKnown RBP10.87□□□□□ -0.67
TRAPPC11-202ENST00000357207 PLAC8L1A1L4L8 177 aa10.87□□□□□ -0.67
TRAPPC11-202ENST00000357207 LYPD5Q6UWN5 251 aa10.87□□□□□ -0.67
TRAPPC11-202ENST00000357207 TRBV7-6A0A0J9YX20 115 aa10.86□□□□□ -0.67
TRAPPC11-202ENST00000357207 Q6ZRU5 148 aa10.86□□□□□ -0.67
TRAPPC11-202ENST00000357207 RETNQ9HD89 108 aa10.86□□□□□ -0.67
TRAPPC11-202ENST00000357207 SPATA3Q8NHX4 192 aa10.86□□□□□ -0.67
TRAPPC11-202ENST00000357207 SMR3AQ99954 134 aa10.86□□□□□ -0.67
TRAPPC11-202ENST00000357207 COL27A1Q8IZC6 1860 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC11-202ENST00000357207 UTRNP46939 3433 aa10.85□□□□□ -0.67
TRAPPC11-202ENST00000357207 PCSK5Q92824 1860 aa10.85□□□□□ -0.67
TRAPPC11-202ENST00000357207 REG3GQ6UW15 175 aa10.85□□□□□ -0.67
TRAPPC11-202ENST00000357207 IGLV9-49A0A0B4J1Y8 123 aa10.85□□□□□ -0.67
TRAPPC11-202ENST00000357207 C10orf25Q5T742 122 aa10.85□□□□□ -0.67
TRAPPC11-202ENST00000357207 ZNF706Q9Y5V0 76 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC11-202ENST00000357207 BCE1O60756 84 aa10.84□□□□□ -0.67
TRAPPC11-202ENST00000357207 A0A087WSZ3 146 aa10.84□□□□□ -0.67
TRAPPC11-202ENST00000357207 F8WDY8 70 aa10.84□□□□□ -0.67
TRAPPC11-202ENST00000357207 PRR15LQ9BU68 103 aa10.84□□□□□ -0.67
TRAPPC11-202ENST00000357207 EPG5Q9HCE0 2579 aa10.83□□□□□ -0.68
TRAPPC11-202ENST00000357207 PMAIP1Q13794 54 aa10.83□□□□□ -0.68
TRAPPC11-202ENST00000357207 F8P00451 2351 aa10.83□□□□□ -0.68
TRAPPC11-202ENST00000357207 FHL3Q13643 280 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms