RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 CRYGAP11844 174 aa12.36□□□□□ -0.43
GYPC-202ENST00000356887 FAM222AQ5U5X8 452 aa12.36□□□□□ -0.43
GYPC-202ENST00000356887 FAM218AQ96MZ4 157 aa12.36□□□□□ -0.43
GYPC-202ENST00000356887 IGKV2-28A0A075B6P5 120 aa12.35□□□□□ -0.43
GYPC-202ENST00000356887 IGKV2D-28P01615 120 aa12.35□□□□□ -0.43
GYPC-202ENST00000356887 RPL28P46779 137 aaKnown RBP12.35□□□□□ -0.43
GYPC-202ENST00000356887 A0A087WZ39 114 aa12.34□□□□□ -0.43
GYPC-202ENST00000356887 BAALC-AS2P0C853 105 aa12.34□□□□□ -0.43
GYPC-202ENST00000356887 LINC00337Q8N6G1 96 aa12.34□□□□□ -0.43
GYPC-202ENST00000356887 SND1-IT1Q9HBX3 110 aa12.34□□□□□ -0.43
GYPC-202ENST00000356887 INAFM1C9JVW0 142 aa12.33□□□□□ -0.44
GYPC-202ENST00000356887 CRPP02741 224 aa12.33□□□□□ -0.44
GYPC-202ENST00000356887 ACYP1P07311 99 aa12.33□□□□□ -0.44
GYPC-202ENST00000356887 C22orf24Q9Y442 160 aa12.33□□□□□ -0.44
GYPC-202ENST00000356887 NIPBLQ6KC79 2804 aaeCLIP12.33□□□□□ -0.447e-7■■■■□ 21.5
GYPC-202ENST00000356887 LINC00158P58513 81 aa12.33□□□□□ -0.44
GYPC-202ENST00000356887 LINC00612Q8N6U2 182 aa12.33□□□□□ -0.44
GYPC-202ENST00000356887 SETD2Q9BYW2 2564 aaPredicted RBP12.33□□□□□ -0.44
GYPC-202ENST00000356887 HILS1P60008 231 aa12.32□□□□□ -0.44
GYPC-202ENST00000356887 IBA57-AS1B1ANH7 110 aa12.31□□□□□ -0.44
GYPC-202ENST00000356887 DEFB130BP0DP73 79 aa12.31□□□□□ -0.44
GYPC-202ENST00000356887 DEFB130AP0DP74 79 aa12.31□□□□□ -0.44
GYPC-202ENST00000356887 CCL18P55774 89 aa12.31□□□□□ -0.44
GYPC-202ENST00000356887 TMEM258P61165 79 aa12.31□□□□□ -0.44
GYPC-202ENST00000356887 C5orf38Q86SI9 138 aa12.31□□□□□ -0.44
GYPC-202ENST00000356887 LINC00959A0A1B0GUT2 108 aa12.31□□□□□ -0.44
GYPC-202ENST00000356887 COX7CP15954 63 aa12.31□□□□□ -0.44
GYPC-202ENST00000356887 GAGE2AQ6NT46 116 aa12.31□□□□□ -0.44
GYPC-202ENST00000356887 NSD1Q96L73 2696 aaPredicted RBP12.3□□□□□ -0.44
GYPC-202ENST00000356887 FN1P02751 2386 aaKnown RBP12.3□□□□□ -0.44
GYPC-202ENST00000356887 FAM236AA0A1B0GUQ0 79 aa12.3□□□□□ -0.44
GYPC-202ENST00000356887 FAM236BA0A1B0GV22 79 aa12.3□□□□□ -0.44
GYPC-202ENST00000356887 F8P00451 2351 aa12.29□□□□□ -0.44
GYPC-202ENST00000356887 C3orf56Q8N813 242 aa12.28□□□□□ -0.44
GYPC-202ENST00000356887 GYPEP15421 78 aa12.28□□□□□ -0.44
GYPC-202ENST00000356887 CXCL5P42830 114 aa12.28□□□□□ -0.44
GYPC-202ENST00000356887 KRTAP10-3P60369 221 aa12.28□□□□□ -0.44
GYPC-202ENST00000356887 SMIM11BQ8TCY0 68 aa12.28□□□□□ -0.44
GYPC-202ENST00000356887 Q9HAA7 133 aa12.26□□□□□ -0.45
GYPC-202ENST00000356887 PRO0628Q9UI54 55 aa12.26□□□□□ -0.45
GYPC-202ENST00000356887 A0A1B0GUV1 79 aa12.26□□□□□ -0.45
GYPC-202ENST00000356887 PFN2P35080 140 aa12.26□□□□□ -0.45
GYPC-202ENST00000356887 MALP21145 153 aa12.25□□□□□ -0.45
GYPC-202ENST00000356887 DPH3Q96FX2 82 aa12.25□□□□□ -0.45
GYPC-202ENST00000356887 X6R8D5 127 aa12.25□□□□□ -0.45
GYPC-202ENST00000356887 C6orf226Q5I0X4 101 aa12.25□□□□□ -0.45
GYPC-202ENST00000356887 LINC00482Q8N8I6 264 aa12.25□□□□□ -0.45
GYPC-202ENST00000356887 H0YGX0 51 aa12.23□□□□□ -0.45
GYPC-202ENST00000356887 SS18Q15532 418 aa12.23□□□□□ -0.45
GYPC-202ENST00000356887 SMCR5Q8TEV8 140 aa12.23□□□□□ -0.45
GYPC-202ENST00000356887 A0A087WYN8 130 aa12.23□□□□□ -0.45
GYPC-202ENST00000356887 XCL1P47992 114 aa12.23□□□□□ -0.45
GYPC-202ENST00000356887 SDIM1Q6ZPB5 146 aa12.23□□□□□ -0.45
GYPC-202ENST00000356887 INAFM2P0DMQ5 153 aa12.22□□□□□ -0.45
GYPC-202ENST00000356887 LINC00643Q86TS7 51 aa12.22□□□□□ -0.45
GYPC-202ENST00000356887 PRO0255Q9UI72 69 aa12.22□□□□□ -0.45
GYPC-202ENST00000356887 PAX4O43316 350 aa12.22□□□□□ -0.45
GYPC-202ENST00000356887 LINC01561Q8N1V8 128 aa12.22□□□□□ -0.45
GYPC-202ENST00000356887 Q5XG85 94 aa12.21□□□□□ -0.45
GYPC-202ENST00000356887 Q8IZM0 81 aa12.21□□□□□ -0.45
GYPC-202ENST00000356887 ATOX1O00244 68 aa12.2□□□□□ -0.46
GYPC-202ENST00000356887 C11orf68Q9H3H3 251 aaKnown RBP12.2□□□□□ -0.46
GYPC-202ENST00000356887 C2orf48Q96LS8 159 aa12.2□□□□□ -0.46
GYPC-202ENST00000356887 DNAL4O96015 105 aa12.19□□□□□ -0.46
GYPC-202ENST00000356887 A0A096LPF7 62 aa12.18□□□□□ -0.46
GYPC-202ENST00000356887 CLPSL2Q6UWE3 100 aa12.18□□□□□ -0.46
GYPC-202ENST00000356887 HIST1H4AP62805 103 aaKnown RBP12.17□□□□□ -0.46
GYPC-202ENST00000356887 KLK5Q9Y337 293 aaPredicted RBP12.17□□□□□ -0.46
GYPC-202ENST00000356887 LYRM9A8MSI8 78 aa12.17□□□□□ -0.46
GYPC-202ENST00000356887 C4orf26Q17RF5 130 aa12.15□□□□□ -0.46
GYPC-202ENST00000356887 OBSCN-AS1Q96MR7 158 aa12.15□□□□□ -0.46
GYPC-202ENST00000356887 LECT2O14960 151 aa12.15□□□□□ -0.46
GYPC-202ENST00000356887 C9orf129Q5T035 196 aaKnown RBP12.15□□□□□ -0.46
GYPC-202ENST00000356887 HRCT1Q6UXD1 115 aa12.15□□□□□ -0.46
GYPC-202ENST00000356887 KIAA0087Q14695 138 aa12.14□□□□□ -0.47
GYPC-202ENST00000356887 LINC00269Q8N2A0 174 aa12.14□□□□□ -0.47
GYPC-202ENST00000356887 SPATA3Q8NHX4 192 aa12.14□□□□□ -0.47
GYPC-202ENST00000356887 CD164L2Q6UWJ8 174 aa12.13□□□□□ -0.47
GYPC-202ENST00000356887 SEC61GP60059 68 aa12.12□□□□□ -0.47
GYPC-202ENST00000356887 NDUFC2-KCTD14E9PQ53 114 aa12.11□□□□□ -0.47
GYPC-202ENST00000356887 C9orf66Q5T8R8 295 aa12.11□□□□□ -0.47
GYPC-202ENST00000356887 CHCHD10Q8WYQ3 142 aaPredicted RBP12.11□□□□□ -0.47
GYPC-202ENST00000356887 TEP1Q99973 2627 aaKnown RBP12.1□□□□□ -0.47
GYPC-202ENST00000356887 DEFB4AO15263 64 aa12.1□□□□□ -0.47
GYPC-202ENST00000356887 NANOS2P60321 138 aaKnown RBP12.1□□□□□ -0.47
GYPC-202ENST00000356887 COX17Q14061 63 aa12.1□□□□□ -0.47
GYPC-202ENST00000356887 C14orf132Q9NPU4 83 aa12.1□□□□□ -0.47
GYPC-202ENST00000356887 SLPIP03973 132 aa12.09□□□□□ -0.47
GYPC-202ENST00000356887 PRR3P79522 188 aaKnown RBP12.09□□□□□ -0.47
GYPC-202ENST00000356887 DEFB135Q30KP9 77 aa12.09□□□□□ -0.47
GYPC-202ENST00000356887 NDUFC2O95298 119 aa12.09□□□□□ -0.47
GYPC-202ENST00000356887 Q8N3U1 123 aa12.09□□□□□ -0.47
GYPC-202ENST00000356887 MAST4O15021 2626 aa12.08□□□□□ -0.47
GYPC-202ENST00000356887 IGHV4-28A0A0C4DH34 117 aa12.08□□□□□ -0.48
GYPC-202ENST00000356887 ANGP03950 147 aaKnown RBP12.08□□□□□ -0.48
GYPC-202ENST00000356887 REG3AQ06141 175 aa12.08□□□□□ -0.48
GYPC-202ENST00000356887 LINC00167Q96N53 147 aa12.08□□□□□ -0.48
GYPC-202ENST00000356887 hADV29S1A0JD25 119 aa12.07□□□□□ -0.48
GYPC-202ENST00000356887 IGLV10-54A0A075B6I4 117 aa12.07□□□□□ -0.48
GYPC-202ENST00000356887 DAD1P61803 113 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 158.5 ms