RNA–Protein interactions for RNA: ENST00000355637.8

RBFOX1-203, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-203ENST00000355637 LINC01554Q52M75 96 aa6.26□□□□□ -1.41
RBFOX1-203ENST00000355637 CSMD1Q96PZ7 3565 aa6.26□□□□□ -1.41
RBFOX1-203ENST00000355637 IGLV11-55A0A075B6I3 123 aa6.26□□□□□ -1.41
RBFOX1-203ENST00000355637 K7EQG2 157 aa6.26□□□□□ -1.41
RBFOX1-203ENST00000355637 PSCAO43653 123 aa6.26□□□□□ -1.41
RBFOX1-203ENST00000355637 IGKV2-28A0A075B6P5 120 aa6.25□□□□□ -1.41
RBFOX1-203ENST00000355637 IGKV2D-28P01615 120 aa6.25□□□□□ -1.41
RBFOX1-203ENST00000355637 COX6A2Q02221 97 aa6.25□□□□□ -1.41
RBFOX1-203ENST00000355637 SPTAN1Q13813 2472 aaKnown RBP6.25□□□□□ -1.41
RBFOX1-203ENST00000355637 M0QY20 66 aa6.25□□□□□ -1.41
RBFOX1-203ENST00000355637 RELNP78509 3460 aa6.25□□□□□ -1.41
RBFOX1-203ENST00000355637 LINC00313P59037 77 aa6.25□□□□□ -1.41
RBFOX1-203ENST00000355637 NPBQ8NG41 125 aa6.24□□□□□ -1.41
RBFOX1-203ENST00000355637 TRBV6-8A0A0A6YYG3 113 aa6.24□□□□□ -1.41
RBFOX1-203ENST00000355637 IGKV3-20P01619 116 aa6.24□□□□□ -1.41
RBFOX1-203ENST00000355637 ZFAND2AQ8N6M9 145 aa6.24□□□□□ -1.41
RBFOX1-203ENST00000355637 IGKV3OR2-268A0A0C4DH90 116 aa6.24□□□□□ -1.41
RBFOX1-203ENST00000355637 LINC01006Q8NI28 216 aa6.23□□□□□ -1.41
RBFOX1-203ENST00000355637 TRBV6-5A0A0K0K1A5 114 aa6.22□□□□□ -1.41
RBFOX1-203ENST00000355637 F8W735 103 aaPredicted RBP6.22□□□□□ -1.41
RBFOX1-203ENST00000355637 ATP6V0E1O15342 81 aa6.22□□□□□ -1.41
RBFOX1-203ENST00000355637 NTM-AS1Q6ZSK4 140 aa6.22□□□□□ -1.41
RBFOX1-203ENST00000355637 IGHV7-81A0A0B4J1V7 117 aa6.22□□□□□ -1.41
RBFOX1-203ENST00000355637 G3V318 75 aa6.22□□□□□ -1.41
RBFOX1-203ENST00000355637 CXCL6P80162 114 aa6.22□□□□□ -1.41
RBFOX1-203ENST00000355637 ODF3BA8MYP8 253 aa6.22□□□□□ -1.41
RBFOX1-203ENST00000355637 ZFP36P26651 326 aaKnown RBP6.22□□□□□ -1.41
RBFOX1-203ENST00000355637 Q6ZQT0 140 aa6.21□□□□□ -1.41
RBFOX1-203ENST00000355637 MP68P56378 58 aa6.21□□□□□ -1.42
RBFOX1-203ENST00000355637 ERC2-IT1O76042 136 aa6.2□□□□□ -1.42
RBFOX1-203ENST00000355637 CCL18P55774 89 aa6.2□□□□□ -1.42
RBFOX1-203ENST00000355637 PROK1P58294 105 aa6.2□□□□□ -1.42
RBFOX1-203ENST00000355637 C19orf54Q5BKX5 351 aa6.2□□□□□ -1.42
RBFOX1-203ENST00000355637 Q8N814 137 aa6.2□□□□□ -1.42
RBFOX1-203ENST00000355637 HIGD2BQ4VC39 106 aa6.2□□□□□ -1.42
RBFOX1-203ENST00000355637 DCHS2Q6V1P9 2916 aa6.2□□□□□ -1.42
RBFOX1-203ENST00000355637 MINOS1Q5TGZ0 78 aa6.2□□□□□ -1.42
RBFOX1-203ENST00000355637 Q8N9W7 124 aa6.2□□□□□ -1.42
RBFOX1-203ENST00000355637 LINC00467Q9BRT7 94 aa6.2□□□□□ -1.42
RBFOX1-203ENST00000355637 MINOS1-NBL1R4GNA1 71 aa6.2□□□□□ -1.42
RBFOX1-203ENST00000355637 BSNQ9UPA5 3926 aa6.19□□□□□ -1.42
RBFOX1-203ENST00000355637 FAM104AQ969W3 186 aa6.19□□□□□ -1.42
RBFOX1-203ENST00000355637 C9orf116Q5BN46 136 aaPredicted RBP6.19□□□□□ -1.42
RBFOX1-203ENST00000355637 ASH1LQ9NR48 2969 aaKnown RBP6.19□□□□□ -1.42
RBFOX1-203ENST00000355637 SMIM1B2RUZ4 78 aa6.19□□□□□ -1.42
RBFOX1-203ENST00000355637 ADM2Q7Z4H4 148 aa6.19□□□□□ -1.42
RBFOX1-203ENST00000355637 OCR1Q9BZK8 76 aa6.19□□□□□ -1.42
RBFOX1-203ENST00000355637 PRR3P79522 188 aaKnown RBP6.18□□□□□ -1.42
RBFOX1-203ENST00000355637 SVEP1Q4LDE5 3571 aa6.18□□□□□ -1.42
RBFOX1-203ENST00000355637 CR1P17927 2039 aa6.18□□□□□ -1.42
RBFOX1-203ENST00000355637 REG3AQ06141 175 aa6.18□□□□□ -1.42
RBFOX1-203ENST00000355637 MOBPQ13875 183 aa6.18□□□□□ -1.42
RBFOX1-203ENST00000355637 FBXL19-AS1Q494R0 122 aa6.18□□□□□ -1.42
RBFOX1-203ENST00000355637 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.18□□□□□ -1.42
RBFOX1-203ENST00000355637 LIMD2Q9BT23 127 aa6.18□□□□□ -1.42
RBFOX1-203ENST00000355637 FSHBP01225 129 aa6.17□□□□□ -1.42
RBFOX1-203ENST00000355637 MED14OSP0DP75 135 aa6.17□□□□□ -1.42
RBFOX1-203ENST00000355637 LINC00242Q5T6M2 205 aa6.17□□□□□ -1.42
RBFOX1-203ENST00000355637 C11orf71Q6IPW1 123 aa6.17□□□□□ -1.42
RBFOX1-203ENST00000355637 IGHV3-11P01762 117 aa6.16□□□□□ -1.42
RBFOX1-203ENST00000355637 LY6EQ16553 131 aa6.16□□□□□ -1.42
RBFOX1-203ENST00000355637 A8MTW9 85 aa6.15□□□□□ -1.42
RBFOX1-203ENST00000355637 BRD3OSQ6XYD6 125 aa6.15□□□□□ -1.42
RBFOX1-203ENST00000355637 LENEPQ9Y5L5 61 aa6.15□□□□□ -1.42
RBFOX1-203ENST00000355637 NCOR2Q9Y618 2525 aa6.15□□□□□ -1.42
RBFOX1-203ENST00000355637 A0A1W2PPR1 153 aa6.15□□□□□ -1.42
RBFOX1-203ENST00000355637 IGHV3OR16-12A0A075B7B8 117 aa6.15□□□□□ -1.43
RBFOX1-203ENST00000355637 A0A0A0MQY5 61 aa6.15□□□□□ -1.43
RBFOX1-203ENST00000355637 IGLV5-39A0A0G2JS06 123 aa6.15□□□□□ -1.43
RBFOX1-203ENST00000355637 SMIM29Q86T20 159 aa6.15□□□□□ -1.43
RBFOX1-203ENST00000355637 Q8N9P0 234 aaPredicted RBP6.15□□□□□ -1.43
RBFOX1-203ENST00000355637 SPG11Q96JI7 2443 aa6.14□□□□□ -1.43
RBFOX1-203ENST00000355637 RETNLBQ9BQ08 111 aa6.14□□□□□ -1.43
RBFOX1-203ENST00000355637 CHD8Q9HCK8 2581 aa6.14□□□□□ -1.43
RBFOX1-203ENST00000355637 IGHV3-16A0A0C4DH30 117 aa6.14□□□□□ -1.43
RBFOX1-203ENST00000355637 CDC42SE1Q9NRR8 79 aa6.14□□□□□ -1.43
RBFOX1-203ENST00000355637 B4DSR2 109 aa6.14□□□□□ -1.43
RBFOX1-203ENST00000355637 C6orf99Q4VX62 202 aa6.14□□□□□ -1.43
RBFOX1-203ENST00000355637 DNAJC9-AS1A6NH13 148 aa6.13□□□□□ -1.43
RBFOX1-203ENST00000355637 PRM2P04554 102 aa6.13□□□□□ -1.43
RBFOX1-203ENST00000355637 C10orf25Q5T742 122 aa6.12□□□□□ -1.43
RBFOX1-203ENST00000355637 CHCHD7Q9BUK0 85 aa6.12□□□□□ -1.43
RBFOX1-203ENST00000355637 HRNRQ86YZ3 2850 aaPredicted RBP6.12□□□□□ -1.43
RBFOX1-203ENST00000355637 IGHV4-28A0A0C4DH34 117 aa6.12□□□□□ -1.43
RBFOX1-203ENST00000355637 C5orf56Q8N8D9 126 aa6.12□□□□□ -1.43
RBFOX1-203ENST00000355637 SPTBN4Q9H254 2564 aa6.12□□□□□ -1.43
RBFOX1-203ENST00000355637 MAP1AP78559 2803 aaPredicted RBP6.12□□□□□ -1.43
RBFOX1-203ENST00000355637 IGLV4-60A0A075B6I1 120 aa6.12□□□□□ -1.43
RBFOX1-203ENST00000355637 MUC7Q8TAX7 377 aa6.12□□□□□ -1.43
RBFOX1-203ENST00000355637 B9D2Q9BPU9 175 aa6.12□□□□□ -1.43
RBFOX1-203ENST00000355637 CYP4F30PQ9H0H9 118 aa6.12□□□□□ -1.43
RBFOX1-203ENST00000355637 HIVEP3Q5T1R4 2406 aa6.11□□□□□ -1.43
RBFOX1-203ENST00000355637 TRBV6-4A0A1B0GX49 114 aa6.11□□□□□ -1.43
RBFOX1-203ENST00000355637 LMO4P61968 165 aa6.11□□□□□ -1.43
RBFOX1-203ENST00000355637 Q6ZQY7 126 aa6.11□□□□□ -1.43
RBFOX1-203ENST00000355637 WNK1Q9H4A3 2382 aa6.11□□□□□ -1.43
RBFOX1-203ENST00000355637 C3orf84H3BNL1 204 aa6.1□□□□□ -1.43
RBFOX1-203ENST00000355637 LINC00208Q96KT6 92 aa6.1□□□□□ -1.43
RBFOX1-203ENST00000355637 IGKV4-1P06312 121 aa6.1□□□□□ -1.43
RBFOX1-203ENST00000355637 IGLV5-45A0A087WSX0 123 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms