RNA–Protein interactions for RNA: ENST00000355547.9

PDZD3-202, Transcript of PDZ domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD3, Length 2,252 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-202ENST00000355547 CXCL5P42830 114 aa12.66□□□□□ -0.38
PDZD3-202ENST00000355547 NF1P21359 2839 aa12.65□□□□□ -0.38
PDZD3-202ENST00000355547 CCL18P55774 89 aa12.65□□□□□ -0.38
PDZD3-202ENST00000355547 LINC00158P58513 81 aa12.65□□□□□ -0.38
PDZD3-202ENST00000355547 JMJD1CQ15652 2540 aa12.64□□□□□ -0.39
PDZD3-202ENST00000355547 IGKV3OR2-268A0A0C4DH90 116 aa12.64□□□□□ -0.39
PDZD3-202ENST00000355547 RNASE1P07998 156 aaKnown RBP12.64□□□□□ -0.39
PDZD3-202ENST00000355547 SMCR5Q8TEV8 140 aa12.64□□□□□ -0.39
PDZD3-202ENST00000355547 MALP21145 153 aa12.63□□□□□ -0.39
PDZD3-202ENST00000355547 RPS28P62857 69 aaKnown RBP12.63□□□□□ -0.39
PDZD3-202ENST00000355547 KRTAP1-1Q07627 177 aa12.63□□□□□ -0.39
PDZD3-202ENST00000355547 C5orf38Q86SI9 138 aa12.63□□□□□ -0.39
PDZD3-202ENST00000355547 SMIM11BQ8TCY0 68 aa12.63□□□□□ -0.39
PDZD3-202ENST00000355547 MTORP42345 2549 aa12.63□□□□□ -0.39
PDZD3-202ENST00000355547 INAFM2P0DMQ5 153 aa12.63□□□□□ -0.39
PDZD3-202ENST00000355547 MAST4O15021 2626 aa12.62□□□□□ -0.39
PDZD3-202ENST00000355547 ANK3Q12955 4377 aaKnown RBP12.62□□□□□ -0.39
PDZD3-202ENST00000355547 Q9HAA7 133 aa12.62□□□□□ -0.39
PDZD3-202ENST00000355547 SMIM9A6NGZ8 99 aa12.62□□□□□ -0.39
PDZD3-202ENST00000355547 COX7CP15954 63 aa12.62□□□□□ -0.39
PDZD3-202ENST00000355547 LINC00959A0A1B0GUT2 108 aa12.61□□□□□ -0.39
PDZD3-202ENST00000355547 F8P00451 2351 aa12.61□□□□□ -0.39
PDZD3-202ENST00000355547 H0YGX0 51 aa12.6□□□□□ -0.39
PDZD3-202ENST00000355547 CRYGAP11844 174 aa12.6□□□□□ -0.39
PDZD3-202ENST00000355547 LINC00612Q8N6U2 182 aa12.6□□□□□ -0.39
PDZD3-202ENST00000355547 KIR2DL5BQ8NHK3 375 aa12.6□□□□□ -0.39
PDZD3-202ENST00000355547 NIPBLQ6KC79 2804 aaeCLIP12.6□□□□□ -0.39
PDZD3-202ENST00000355547 LOC107984640A0A0U1RRK4 108 aa12.59□□□□□ -0.39
PDZD3-202ENST00000355547 A0A087WYN8 130 aa12.58□□□□□ -0.4
PDZD3-202ENST00000355547 HIST1H4AP62805 103 aaKnown RBP12.58□□□□□ -0.4
PDZD3-202ENST00000355547 FAM19A5Q7Z5A7 132 aaPredicted RBP12.58□□□□□ -0.4
PDZD3-202ENST00000355547 C2orf48Q96LS8 159 aa12.58□□□□□ -0.4
PDZD3-202ENST00000355547 HIVEP2P31629 2446 aa12.57□□□□□ -0.4
PDZD3-202ENST00000355547 WIPF1O43516 503 aa12.57□□□□□ -0.4
PDZD3-202ENST00000355547 A0A1B0GUV1 79 aa12.57□□□□□ -0.4
PDZD3-202ENST00000355547 PFN2P35080 140 aa12.57□□□□□ -0.4
PDZD3-202ENST00000355547 SETD2Q9BYW2 2564 aaPredicted RBP12.56□□□□□ -0.4
PDZD3-202ENST00000355547 TEP1Q99973 2627 aaKnown RBP12.56□□□□□ -0.4
PDZD3-202ENST00000355547 LY6G6DO95868 133 aa12.55□□□□□ -0.4
PDZD3-202ENST00000355547 DNAL4O96015 105 aa12.55□□□□□ -0.4
PDZD3-202ENST00000355547 DEFB130BP0DP73 79 aa12.55□□□□□ -0.4
PDZD3-202ENST00000355547 DEFB130AP0DP74 79 aa12.55□□□□□ -0.4
PDZD3-202ENST00000355547 GAGE2AQ6NT46 116 aa12.55□□□□□ -0.4
PDZD3-202ENST00000355547 OBSCN-AS1Q96MR7 158 aa12.55□□□□□ -0.4
PDZD3-202ENST00000355547 ATOX1O00244 68 aa12.55□□□□□ -0.4
PDZD3-202ENST00000355547 C6orf226Q5I0X4 101 aa12.55□□□□□ -0.4
PDZD3-202ENST00000355547 OR13C6PQ8NH95 151 aa12.55□□□□□ -0.4
PDZD3-202ENST00000355547 KLK5Q9Y337 293 aaPredicted RBP12.54□□□□□ -0.4
PDZD3-202ENST00000355547 PAX4O43316 350 aa12.54□□□□□ -0.4
PDZD3-202ENST00000355547 GYPEP15421 78 aa12.54□□□□□ -0.4
PDZD3-202ENST00000355547 LINC01561Q8N1V8 128 aa12.54□□□□□ -0.4
PDZD3-202ENST00000355547 NSD1Q96L73 2696 aaPredicted RBP12.53□□□□□ -0.4
PDZD3-202ENST00000355547 Q8IZM0 81 aa12.53□□□□□ -0.4
PDZD3-202ENST00000355547 SS18Q15532 418 aa12.53□□□□□ -0.4
PDZD3-202ENST00000355547 C9orf129Q5T035 196 aaKnown RBP12.51□□□□□ -0.41
PDZD3-202ENST00000355547 XCL1P47992 114 aa12.51□□□□□ -0.41
PDZD3-202ENST00000355547 LECT2O14960 151 aa12.5□□□□□ -0.41
PDZD3-202ENST00000355547 HILS1P60008 231 aa12.5□□□□□ -0.41
PDZD3-202ENST00000355547 X6R8D5 127 aa12.5□□□□□ -0.41
PDZD3-202ENST00000355547 FN1P02751 2386 aaKnown RBP12.5□□□□□ -0.41
PDZD3-202ENST00000355547 PRO0255Q9UI72 69 aa12.49□□□□□ -0.41
PDZD3-202ENST00000355547 C11orf68Q9H3H3 251 aaKnown RBP12.48□□□□□ -0.41
PDZD3-202ENST00000355547 TMEM258P61165 79 aa12.48□□□□□ -0.41
PDZD3-202ENST00000355547 C14orf132Q9NPU4 83 aa12.48□□□□□ -0.41
PDZD3-202ENST00000355547 INAFM1C9JVW0 142 aa12.46□□□□□ -0.41
PDZD3-202ENST00000355547 RPL18AQ02543 176 aaKnown RBP12.46□□□□□ -0.42
PDZD3-202ENST00000355547 hADV29S1A0JD25 119 aa12.45□□□□□ -0.42
PDZD3-202ENST00000355547 KIAA0087Q14695 138 aa12.45□□□□□ -0.42
PDZD3-202ENST00000355547 LINC00482Q8N8I6 264 aa12.45□□□□□ -0.42
PDZD3-202ENST00000355547 LINC00167Q96N53 147 aa12.45□□□□□ -0.42
PDZD3-202ENST00000355547 NANOS2P60321 138 aaKnown RBP12.44□□□□□ -0.42
PDZD3-202ENST00000355547 KRTAP10-3P60369 221 aa12.44□□□□□ -0.42
PDZD3-202ENST00000355547 CLPSL2Q6UWE3 100 aa12.44□□□□□ -0.42
PDZD3-202ENST00000355547 NDUFC2O95298 119 aa12.43□□□□□ -0.42
PDZD3-202ENST00000355547 COX17Q14061 63 aa12.43□□□□□ -0.42
PDZD3-202ENST00000355547 CD164L2Q6UWJ8 174 aa12.43□□□□□ -0.42
PDZD3-202ENST00000355547 ORMDL1Q9P0S3 153 aa12.43□□□□□ -0.42
PDZD3-202ENST00000355547 SLPIP03973 132 aa12.42□□□□□ -0.42
PDZD3-202ENST00000355547 DPH3Q96FX2 82 aa12.42□□□□□ -0.42
PDZD3-202ENST00000355547 LYRM9A8MSI8 78 aa12.42□□□□□ -0.42
PDZD3-202ENST00000355547 NCR3O14931 201 aa12.42□□□□□ -0.42
PDZD3-202ENST00000355547 LINC00846Q9NV44 126 aa12.41□□□□□ -0.42
PDZD3-202ENST00000355547 A0A096LPF7 62 aa12.41□□□□□ -0.42
PDZD3-202ENST00000355547 IGHV4-28A0A0C4DH34 117 aa12.41□□□□□ -0.42
PDZD3-202ENST00000355547 Q6JHZ5 121 aa12.41□□□□□ -0.42
PDZD3-202ENST00000355547 LINC00269Q8N2A0 174 aa12.41□□□□□ -0.42
PDZD3-202ENST00000355547 SERP2Q8N6R1 65 aa12.41□□□□□ -0.42
PDZD3-202ENST00000355547 UPK3BQ9BT76 320 aa12.41□□□□□ -0.42
PDZD3-202ENST00000355547 PRR3P79522 188 aaKnown RBP12.39□□□□□ -0.43
PDZD3-202ENST00000355547 CHCHD10Q8WYQ3 142 aaPredicted RBP12.39□□□□□ -0.43
PDZD3-202ENST00000355547 CYSTM1Q9H1C7 97 aa12.39□□□□□ -0.43
PDZD3-202ENST00000355547 Q8N814 137 aa12.38□□□□□ -0.43
PDZD3-202ENST00000355547 CCKP06307 115 aa12.36□□□□□ -0.43
PDZD3-202ENST00000355547 REG3AQ06141 175 aa12.36□□□□□ -0.43
PDZD3-202ENST00000355547 JMJD7-PLA2G4BH0Y9G9 81 aa12.34□□□□□ -0.43
PDZD3-202ENST00000355547 ANGP03950 147 aaKnown RBP12.34□□□□□ -0.43
PDZD3-202ENST00000355547 Q8N3U1 123 aa12.34□□□□□ -0.43
PDZD3-202ENST00000355547 IGLV10-54A0A075B6I4 117 aa12.33□□□□□ -0.44
PDZD3-202ENST00000355547 IGKV3D-7A0A0C4DH55 119 aa12.33□□□□□ -0.44
PDZD3-202ENST00000355547 TMEM256-PLSCR3K7ERE1 68 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms