RNA–Protein interactions for RNA: ENST00000342916.7

EGFR-202, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-202ENST00000342916 A0A1W2PPM0 123 aa12.8□□□□□ -0.36
EGFR-202ENST00000342916 NPC2P61916 151 aa12.8□□□□□ -0.36
EGFR-202ENST00000342916 HERV-K104P63124 156 aa12.8□□□□□ -0.36
EGFR-202ENST00000342916 RPL24P83731 157 aaKnown RBP12.8□□□□□ -0.36
EGFR-202ENST00000342916 FOXI1Q12951 378 aa12.79□□□□□ -0.36
EGFR-202ENST00000342916 A0A0U1RRA0 63 aa12.78□□□□□ -0.36
EGFR-202ENST00000342916 LINC01561Q8N1V8 128 aa12.78□□□□□ -0.36
EGFR-202ENST00000342916 COX7A2LO14548 114 aa12.78□□□□□ -0.36
EGFR-202ENST00000342916 CIRBPQ14011 172 aaKnown RBP12.78□□□□□ -0.36
EGFR-202ENST00000342916 KLK5Q9Y337 293 aaPredicted RBP12.77□□□□□ -0.36
EGFR-202ENST00000342916 MEIG1Q5JSS6 88 aa12.77□□□□□ -0.37
EGFR-202ENST00000342916 UBE2WQ96B02 151 aa12.76□□□□□ -0.37
EGFR-202ENST00000342916 PGPEP1Q9NXJ5 209 aa12.76□□□□□ -0.37
EGFR-202ENST00000342916 LINC00588Q9Y4M8 146 aa12.76□□□□□ -0.37
EGFR-202ENST00000342916 GAGE12HA6NDE8 117 aa12.75□□□□□ -0.37
EGFR-202ENST00000342916 Q8IZM0 81 aa12.75□□□□□ -0.37
EGFR-202ENST00000342916 C6orf226Q5I0X4 101 aa12.74□□□□□ -0.37
EGFR-202ENST00000342916 TSPAN13O95857 204 aa12.74□□□□□ -0.37
EGFR-202ENST00000342916 CRPP02741 224 aa12.74□□□□□ -0.37
EGFR-202ENST00000342916 IFITM1P13164 125 aa12.74□□□□□ -0.37
EGFR-202ENST00000342916 LINC00308Q8TCZ7 52 aa12.74□□□□□ -0.37
EGFR-202ENST00000342916 FABP2P12104 132 aa12.73□□□□□ -0.37
EGFR-202ENST00000342916 KIAA0087Q14695 138 aa12.73□□□□□ -0.37
EGFR-202ENST00000342916 CASC10Q5T4H9 136 aa12.73□□□□□ -0.37
EGFR-202ENST00000342916 SOSTDC1Q6X4U4 206 aa12.73□□□□□ -0.37
EGFR-202ENST00000342916 A0A0B4J2C4 111 aa12.73□□□□□ -0.37
EGFR-202ENST00000342916 LINC01556Q5JQF7 62 aa12.73□□□□□ -0.37
EGFR-202ENST00000342916 PRO1854Q9UHT4 67 aa12.73□□□□□ -0.37
EGFR-202ENST00000342916 VPS13DQ5THJ4 4388 aa12.73□□□□□ -0.37
EGFR-202ENST00000342916 MALP21145 153 aa12.72□□□□□ -0.37
EGFR-202ENST00000342916 C2orf82Q6UX34 121 aa12.72□□□□□ -0.37
EGFR-202ENST00000342916 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.72□□□□□ -0.37
EGFR-202ENST00000342916 K7EP34 96 aa12.72□□□□□ -0.37
EGFR-202ENST00000342916 KMT2AQ03164 3969 aa12.72□□□□□ -0.37
EGFR-202ENST00000342916 GAGE10A6NGK3 116 aa12.71□□□□□ -0.37
EGFR-202ENST00000342916 CBY1Q9Y3M2 126 aa12.71□□□□□ -0.37
EGFR-202ENST00000342916 SPCS1Q9Y6A9 102 aa12.71□□□□□ -0.37
EGFR-202ENST00000342916 TRAV8-4A0A0B4J246 113 aa12.7□□□□□ -0.38
EGFR-202ENST00000342916 SFTA2Q6UW10 78 aa12.7□□□□□ -0.38
EGFR-202ENST00000342916 CCL18P55774 89 aa12.69□□□□□ -0.38
EGFR-202ENST00000342916 IBA57-AS1B1ANH7 110 aa12.69□□□□□ -0.38
EGFR-202ENST00000342916 KRTAP26-1Q6PEX3 210 aa12.69□□□□□ -0.38
EGFR-202ENST00000342916 DNAH10OSP0CZ25 163 aa12.68□□□□□ -0.38
EGFR-202ENST00000342916 MIR7-3HGQ8N6C7 128 aa12.68□□□□□ -0.38
EGFR-202ENST00000342916 GTF2H5Q6ZYL4 71 aa12.68□□□□□ -0.38
EGFR-202ENST00000342916 LINC00158P58513 81 aa12.67□□□□□ -0.38
EGFR-202ENST00000342916 ERG28Q9UKR5 140 aa12.67□□□□□ -0.38
EGFR-202ENST00000342916 PFN2P35080 140 aa12.66□□□□□ -0.38
EGFR-202ENST00000342916 CKS1BP61024 79 aa12.66□□□□□ -0.38
EGFR-202ENST00000342916 CFAP161Q6P656 301 aa12.66□□□□□ -0.38
EGFR-202ENST00000342916 UBE2DNLQ8IWF7 75 aa12.66□□□□□ -0.38
EGFR-202ENST00000342916 C3orf84H3BNL1 204 aa12.65□□□□□ -0.38
EGFR-202ENST00000342916 H7C2G1 150 aa12.65□□□□□ -0.38
EGFR-202ENST00000342916 SPAG11BQ08648 103 aa12.65□□□□□ -0.38
EGFR-202ENST00000342916 LINC00526Q96FQ7 95 aa12.65□□□□□ -0.38
EGFR-202ENST00000342916 CXCL5P42830 114 aa12.64□□□□□ -0.39
EGFR-202ENST00000342916 C6orf223Q8N319 242 aa12.64□□□□□ -0.39
EGFR-202ENST00000342916 COPS9Q8WXC6 57 aa12.64□□□□□ -0.39
EGFR-202ENST00000342916 PPDPFQ9H3Y8 114 aa12.64□□□□□ -0.39
EGFR-202ENST00000342916 OCIAD2Q56VL3 154 aa12.63□□□□□ -0.39
EGFR-202ENST00000342916 LOC107984156A0A0G2JMH3 177 aa12.62□□□□□ -0.39
EGFR-202ENST00000342916 ARL17AQ8IVW1 177 aa12.62□□□□□ -0.39
EGFR-202ENST00000342916 HYDINQ4G0P3 5121 aa12.62□□□□□ -0.39
EGFR-202ENST00000342916 ALMS1Q8TCU4 4167 aa12.62□□□□□ -0.39
EGFR-202ENST00000342916 C10orf25Q5T742 122 aa12.61□□□□□ -0.39
EGFR-202ENST00000342916 UPK3BQ9BT76 320 aa12.61□□□□□ -0.39
EGFR-202ENST00000342916 C9orf116Q5BN46 136 aaPredicted RBP12.61□□□□□ -0.39
EGFR-202ENST00000342916 C1orf43Q9BWL3 253 aa12.61□□□□□ -0.39
EGFR-202ENST00000342916 UNQ6190/PRO20217Q6UXQ8 127 aa12.6□□□□□ -0.39
EGFR-202ENST00000342916 DNAH10Q8IVF4 4471 aa12.6□□□□□ -0.39
EGFR-202ENST00000342916 RPL13AP40429 203 aaKnown RBP12.59□□□□□ -0.39
EGFR-202ENST00000342916 Q1RN00 199 aa12.59□□□□□ -0.39
EGFR-202ENST00000342916 Q9HAA7 133 aa12.59□□□□□ -0.39
EGFR-202ENST00000342916 IGKV2D-24A0A075B6R9 120 aa12.58□□□□□ -0.39
EGFR-202ENST00000342916 H3BMG7 143 aa12.58□□□□□ -0.39
EGFR-202ENST00000342916 KRTAP1-5Q9BYS1 174 aa12.58□□□□□ -0.4
EGFR-202ENST00000342916 SND1-IT1Q9HBX3 110 aa12.58□□□□□ -0.4
EGFR-202ENST00000342916 C15orf56Q8N910 161 aa12.57□□□□□ -0.4
EGFR-202ENST00000342916 RNF151Q2KHN1 245 aa12.57□□□□□ -0.4
EGFR-202ENST00000342916 NTN5Q8WTR8 489 aaPredicted RBP12.57□□□□□ -0.4
EGFR-202ENST00000342916 TRIAP1O43715 76 aa12.56□□□□□ -0.4
EGFR-202ENST00000342916 LY6G6CO95867 125 aa12.56□□□□□ -0.4
EGFR-202ENST00000342916 PSMB2P49721 201 aa12.56□□□□□ -0.4
EGFR-202ENST00000342916 COX17Q14061 63 aa12.56□□□□□ -0.4
EGFR-202ENST00000342916 HIGD2BQ4VC39 106 aa12.56□□□□□ -0.4
EGFR-202ENST00000342916 IGKV2-28A0A075B6P5 120 aa12.56□□□□□ -0.4
EGFR-202ENST00000342916 IGKV2D-28P01615 120 aa12.56□□□□□ -0.4
EGFR-202ENST00000342916 K7ERU9 68 aa12.55□□□□□ -0.4
EGFR-202ENST00000342916 TCL1BO95988 128 aa12.55□□□□□ -0.4
EGFR-202ENST00000342916 KMT2CQ8NEZ4 4911 aaKnown RBP12.55□□□□□ -0.4
EGFR-202ENST00000342916 SACSQ9NZJ4 4579 aa12.55□□□□□ -0.4
EGFR-202ENST00000342916 TRBV30A0A0K0K1B3 111 aa12.54□□□□□ -0.4
EGFR-202ENST00000342916 LYRM7Q5U5X0 104 aa12.54□□□□□ -0.4
EGFR-202ENST00000342916 LINC00476Q8WZB0 136 aa12.54□□□□□ -0.4
EGFR-202ENST00000342916 SCGB1C2P0DMR2 95 aa12.54□□□□□ -0.4
EGFR-202ENST00000342916 LINC00337Q8N6G1 96 aa12.53□□□□□ -0.4
EGFR-202ENST00000342916 C6orf48Q9UBA6 75 aa12.52□□□□□ -0.41
EGFR-202ENST00000342916 DNAH6Q9C0G6 4158 aa12.52□□□□□ -0.41
EGFR-202ENST00000342916 GVQW2A0A096LPI5 108 aaPredicted RBP12.52□□□□□ -0.41
EGFR-202ENST00000342916 ZNF561-AS1K7EIQ3 104 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms