RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 H7C423 109 aa8.56□□□□□ -1.04
CDH5-201ENST00000341529 CCL18P55774 89 aa8.56□□□□□ -1.04
CDH5-201ENST00000341529 SMIM11BQ8TCY0 68 aa8.55□□□□□ -1.04
CDH5-201ENST00000341529 TRAV23DV6A0A075B6W5 121 aa8.54□□□□□ -1.04
CDH5-201ENST00000341529 LST1O00453 97 aa8.54□□□□□ -1.04
CDH5-201ENST00000341529 IGLV1-51P01701 117 aa8.54□□□□□ -1.04
CDH5-201ENST00000341529 ETDCA0A1B0GVM5 59 aa8.54□□□□□ -1.04
CDH5-201ENST00000341529 SVIPQ8NHG7 77 aa8.53□□□□□ -1.04
CDH5-201ENST00000341529 NDUFV3P56181 108 aaKnown RBP8.53□□□□□ -1.04
CDH5-201ENST00000341529 AMELXQ99217 191 aa8.53□□□□□ -1.04
CDH5-201ENST00000341529 A0A096LNI7 61 aa8.53□□□□□ -1.04
CDH5-201ENST00000341529 IBA57-AS1B1ANH7 110 aa8.53□□□□□ -1.04
CDH5-201ENST00000341529 C11orf45Q8TAV5 145 aa8.53□□□□□ -1.04
CDH5-201ENST00000341529 DEFB131BA0A096LNP1 70 aa8.52□□□□□ -1.04
CDH5-201ENST00000341529 UNQ6190/PRO20217Q6UXQ8 127 aa8.52□□□□□ -1.04
CDH5-201ENST00000341529 SPANXDQ9BXN6 97 aa8.52□□□□□ -1.05
CDH5-201ENST00000341529 BRI3O95415 125 aa8.52□□□□□ -1.05
CDH5-201ENST00000341529 RBM3P98179 157 aaKnown RBP8.52□□□□□ -1.05
CDH5-201ENST00000341529 DIRC1Q969H9 104 aa8.52□□□□□ -1.05
CDH5-201ENST00000341529 ACYP1P07311 99 aa8.52□□□□□ -1.05
CDH5-201ENST00000341529 BAHCC1Q9P281 2608 aa8.52□□□□□ -1.05
CDH5-201ENST00000341529 LYRM9A8MSI8 78 aa8.51□□□□□ -1.05
CDH5-201ENST00000341529 IGKV2-28A0A075B6P5 120 aa8.51□□□□□ -1.05
CDH5-201ENST00000341529 IGKV2D-28P01615 120 aa8.51□□□□□ -1.05
CDH5-201ENST00000341529 IGHV4-30-4P0DP06 118 aa8.51□□□□□ -1.05
CDH5-201ENST00000341529 NTM-AS1Q6ZSK4 140 aa8.51□□□□□ -1.05
CDH5-201ENST00000341529 C11orf72Q8NBR9 251 aa8.51□□□□□ -1.05
CDH5-201ENST00000341529 FHL2Q14192 279 aa8.51□□□□□ -1.05
CDH5-201ENST00000341529 A8MTW9 85 aa8.5□□□□□ -1.05
CDH5-201ENST00000341529 FAM19A4Q96LR4 140 aa8.5□□□□□ -1.05
CDH5-201ENST00000341529 WFDC9Q8NEX5 89 aa8.5□□□□□ -1.05
CDH5-201ENST00000341529 KPRPQ5T749 579 aaPredicted RBP8.5□□□□□ -1.05
CDH5-201ENST00000341529 CXCL5P42830 114 aa8.49□□□□□ -1.05
CDH5-201ENST00000341529 Q6ZQY7 126 aa8.49□□□□□ -1.05
CDH5-201ENST00000341529 LINC00643Q86TS7 51 aa8.49□□□□□ -1.05
CDH5-201ENST00000341529 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.49□□□□□ -1.05
CDH5-201ENST00000341529 SMIM9A6NGZ8 99 aa8.48□□□□□ -1.05
CDH5-201ENST00000341529 SMCPP49901 116 aaPredicted RBP8.48□□□□□ -1.05
CDH5-201ENST00000341529 Q8N2B8 174 aa8.48□□□□□ -1.05
CDH5-201ENST00000341529 C6orf223Q8N319 242 aa8.48□□□□□ -1.05
CDH5-201ENST00000341529 DCHS2Q6V1P9 2916 aa8.48□□□□□ -1.05
CDH5-201ENST00000341529 NANOS2P60321 138 aaKnown RBP8.48□□□□□ -1.05
CDH5-201ENST00000341529 CD164L2Q6UWJ8 174 aa8.48□□□□□ -1.05
CDH5-201ENST00000341529 SPATA25Q9BR10 227 aa8.48□□□□□ -1.05
CDH5-201ENST00000341529 BEAN1Q3B7T3 259 aa8.48□□□□□ -1.05
CDH5-201ENST00000341529 NF1P21359 2839 aa8.47□□□□□ -1.05
CDH5-201ENST00000341529 CYSRT1A8MQ03 144 aa8.47□□□□□ -1.05
CDH5-201ENST00000341529 CELSR2Q9HCU4 2923 aa8.47□□□□□ -1.05
CDH5-201ENST00000341529 TMEM256-PLSCR3K7ERE1 68 aa8.47□□□□□ -1.05
CDH5-201ENST00000341529 Q8N3U1 123 aa8.47□□□□□ -1.05
CDH5-201ENST00000341529 HIGD2AQ9BW72 106 aa8.47□□□□□ -1.05
CDH5-201ENST00000341529 CCDC179H3BU77 68 aa8.46□□□□□ -1.05
CDH5-201ENST00000341529 COX7BP24311 80 aa8.46□□□□□ -1.05
CDH5-201ENST00000341529 JMJD7-PLA2G4BH0Y9G9 81 aa8.46□□□□□ -1.06
CDH5-201ENST00000341529 TIMM17BO60830 172 aa8.46□□□□□ -1.06
CDH5-201ENST00000341529 MIFP14174 115 aa8.46□□□□□ -1.06
CDH5-201ENST00000341529 NREPQ16612 68 aa8.46□□□□□ -1.06
CDH5-201ENST00000341529 ENHOQ6UWT2 76 aa8.46□□□□□ -1.06
CDH5-201ENST00000341529 NSD1Q96L73 2696 aaPredicted RBP8.46□□□□□ -1.06
CDH5-201ENST00000341529 A0A087WYN8 130 aa8.46□□□□□ -1.06
CDH5-201ENST00000341529 RMI2Q96E14 147 aa8.45□□□□□ -1.06
CDH5-201ENST00000341529 A0A087WVE0 104 aa8.44□□□□□ -1.06
CDH5-201ENST00000341529 EIF4EBP3O60516 100 aaPredicted RBP8.44□□□□□ -1.06
CDH5-201ENST00000341529 C20orf197Q8N268 126 aa8.44□□□□□ -1.06
CDH5-201ENST00000341529 LINC00337Q8N6G1 96 aa8.44□□□□□ -1.06
CDH5-201ENST00000341529 RPL37AP8A6NKH3 93 aa8.44□□□□□ -1.06
CDH5-201ENST00000341529 Q6ZTC4 211 aa8.44□□□□□ -1.06
CDH5-201ENST00000341529 FAM19A5Q7Z5A7 132 aaPredicted RBP8.44□□□□□ -1.06
CDH5-201ENST00000341529 C3orf84H3BNL1 204 aa8.43□□□□□ -1.06
CDH5-201ENST00000341529 A0A087WZ39 114 aa8.43□□□□□ -1.06
CDH5-201ENST00000341529 A0A0J9YWU9 116 aa8.43□□□□□ -1.06
CDH5-201ENST00000341529 LINC01546A6NGU7 62 aa8.43□□□□□ -1.06
CDH5-201ENST00000341529 ATOX1O00244 68 aa8.43□□□□□ -1.06
CDH5-201ENST00000341529 FUSP35637 526 aaKnown RBP eCLIP8.42□□□□□ -1.06
CDH5-201ENST00000341529 SOSTDC1Q6X4U4 206 aa8.42□□□□□ -1.06
CDH5-201ENST00000341529 CELA1Q9UNI1 258 aa8.41□□□□□ -1.06
CDH5-201ENST00000341529 SYCNQ0VAF6 134 aa8.41□□□□□ -1.06
CDH5-201ENST00000341529 UPK3BQ9BT76 320 aa8.41□□□□□ -1.06
CDH5-201ENST00000341529 LELP1Q5T871 98 aa8.4□□□□□ -1.06
CDH5-201ENST00000341529 CDIP1Q9H305 208 aa8.4□□□□□ -1.06
CDH5-201ENST00000341529 FBN2P35556 2912 aa8.4□□□□□ -1.06
CDH5-201ENST00000341529 PRO0461Q9UI25 63 aa8.4□□□□□ -1.07
CDH5-201ENST00000341529 WFDC10BQ8IUB3 73 aa8.39□□□□□ -1.07
CDH5-201ENST00000341529 SMG1Q96Q15 3661 aaKnown RBP8.39□□□□□ -1.07
CDH5-201ENST00000341529 ZNF575Q86XF7 245 aa8.39□□□□□ -1.07
CDH5-201ENST00000341529 Q8IZM0 81 aa8.39□□□□□ -1.07
CDH5-201ENST00000341529 CDK2AP2O75956 126 aa8.38□□□□□ -1.07
CDH5-201ENST00000341529 TRBV10-3A0A0K0K1G6 114 aa8.38□□□□□ -1.07
CDH5-201ENST00000341529 CCKP06307 115 aa8.38□□□□□ -1.07
CDH5-201ENST00000341529 PPDPFQ9H3Y8 114 aa8.38□□□□□ -1.07
CDH5-201ENST00000341529 IGHV3OR16-9A0A0B4J2B5 98 aa8.37□□□□□ -1.07
CDH5-201ENST00000341529 M0R2N4 97 aa8.37□□□□□ -1.07
CDH5-201ENST00000341529 CSDC2Q9Y534 153 aaKnown RBP8.37□□□□□ -1.07
CDH5-201ENST00000341529 KIR2DL5BQ8NHK3 375 aa8.37□□□□□ -1.07
CDH5-201ENST00000341529 UBE2AP49459 152 aa8.35□□□□□ -1.07
CDH5-201ENST00000341529 FAM218AQ96MZ4 157 aa8.35□□□□□ -1.07
CDH5-201ENST00000341529 IGLV5-39A0A0G2JS06 123 aa8.35□□□□□ -1.07
CDH5-201ENST00000341529 USP17L23D6RBM5 183 aa8.35□□□□□ -1.07
CDH5-201ENST00000341529 RPL28P46779 137 aaKnown RBP8.35□□□□□ -1.07
CDH5-201ENST00000341529 NDUFS5O43920 106 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms