RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 COX7A2LO14548 114 aa11.32□□□□□ -0.6
LITAF-201ENST00000339430 LINC00158P58513 81 aa11.32□□□□□ -0.6
LITAF-201ENST00000339430 DEFB135Q30KP9 77 aa11.32□□□□□ -0.6
LITAF-201ENST00000339430 TRAV8-4A0A0B4J246 113 aa11.31□□□□□ -0.6
LITAF-201ENST00000339430 XCL1P47992 114 aa11.31□□□□□ -0.6
LITAF-201ENST00000339430 A0A087WZ39 114 aa11.31□□□□□ -0.6
LITAF-201ENST00000339430 PFN2P35080 140 aa11.31□□□□□ -0.6
LITAF-201ENST00000339430 APOC4P55056 127 aa11.3□□□□□ -0.6
LITAF-201ENST00000339430 NBEAL1Q6ZS30 2694 aa11.3□□□□□ -0.6
LITAF-201ENST00000339430 MGAM2Q2M2H8 2515 aa11.3□□□□□ -0.6
LITAF-201ENST00000339430 SND1-IT1Q9HBX3 110 aa11.3□□□□□ -0.6
LITAF-201ENST00000339430 PRO0255Q9UI72 69 aa11.3□□□□□ -0.6
LITAF-201ENST00000339430 LINC00337Q8N6G1 96 aa11.29□□□□□ -0.6
LITAF-201ENST00000339430 CKS1BP61024 79 aa11.28□□□□□ -0.6
LITAF-201ENST00000339430 IGKV2-28A0A075B6P5 120 aa11.28□□□□□ -0.6
LITAF-201ENST00000339430 PAX4O43316 350 aa11.28□□□□□ -0.6
LITAF-201ENST00000339430 IGKV2D-28P01615 120 aa11.28□□□□□ -0.6
LITAF-201ENST00000339430 SMIM9A6NGZ8 99 aa11.27□□□□□ -0.6
LITAF-201ENST00000339430 CRPP02741 224 aa11.27□□□□□ -0.6
LITAF-201ENST00000339430 FAM218AQ96MZ4 157 aa11.27□□□□□ -0.6
LITAF-201ENST00000339430 CCL18P55774 89 aa11.26□□□□□ -0.61
LITAF-201ENST00000339430 C6orf226Q5I0X4 101 aa11.26□□□□□ -0.61
LITAF-201ENST00000339430 A0A1B0GV72 72 aa11.26□□□□□ -0.61
LITAF-201ENST00000339430 SS18Q15532 418 aa11.26□□□□□ -0.61
LITAF-201ENST00000339430 Q8N3U1 123 aa11.26□□□□□ -0.61
LITAF-201ENST00000339430 TRAV13-2A0A0B4J235 113 aa11.25□□□□□ -0.61
LITAF-201ENST00000339430 PRB2P02812 416 aaPredicted RBP11.25□□□□□ -0.61
LITAF-201ENST00000339430 IGHV4-28A0A0C4DH34 117 aa11.24□□□□□ -0.61
LITAF-201ENST00000339430 A0A1B0GUV1 79 aa11.24□□□□□ -0.61
LITAF-201ENST00000339430 IBA57-AS1B1ANH7 110 aa11.24□□□□□ -0.61
LITAF-201ENST00000339430 LYRM9A8MSI8 78 aa11.24□□□□□ -0.61
LITAF-201ENST00000339430 SNCGO76070 127 aa11.24□□□□□ -0.61
LITAF-201ENST00000339430 PPDPFQ9H3Y8 114 aa11.23□□□□□ -0.61
LITAF-201ENST00000339430 LINC00269Q8N2A0 174 aa11.23□□□□□ -0.61
LITAF-201ENST00000339430 Q9HAA7 133 aa11.23□□□□□ -0.61
LITAF-201ENST00000339430 CELA1Q9UNI1 258 aa11.23□□□□□ -0.61
LITAF-201ENST00000339430 IGLV10-54A0A075B6I4 117 aa11.22□□□□□ -0.61
LITAF-201ENST00000339430 C15orf53Q8NAA6 179 aa11.22□□□□□ -0.61
LITAF-201ENST00000339430 RPL28P46779 137 aaKnown RBP11.21□□□□□ -0.61
LITAF-201ENST00000339430 DAD1P61803 113 aa11.21□□□□□ -0.61
LITAF-201ENST00000339430 SMIM11BQ8TCY0 68 aa11.21□□□□□ -0.61
LITAF-201ENST00000339430 TRAV26-1A0A087WT03 109 aa11.2□□□□□ -0.62
LITAF-201ENST00000339430 TRACP01848 142 aa11.2□□□□□ -0.62
LITAF-201ENST00000339430 BAALC-AS2P0C853 105 aa11.2□□□□□ -0.62
LITAF-201ENST00000339430 HTN3P15516 51 aa11.2□□□□□ -0.62
LITAF-201ENST00000339430 TTC32Q5I0X7 151 aa11.2□□□□□ -0.62
LITAF-201ENST00000339430 DEFB121Q5J5C9 76 aa11.2□□□□□ -0.62
LITAF-201ENST00000339430 ANGP03950 147 aaKnown RBP11.2□□□□□ -0.62
LITAF-201ENST00000339430 OR13C6PQ8NH95 151 aa11.19□□□□□ -0.62
LITAF-201ENST00000339430 DNAH3Q8TD57 4116 aa11.19□□□□□ -0.62
LITAF-201ENST00000339430 Q8IZM0 81 aa11.18□□□□□ -0.62
LITAF-201ENST00000339430 A0A087WYN8 130 aa11.18□□□□□ -0.62
LITAF-201ENST00000339430 GAGE2BQ13066 116 aa11.18□□□□□ -0.62
LITAF-201ENST00000339430 GAGE2EQ4V326 116 aa11.18□□□□□ -0.62
LITAF-201ENST00000339430 GAGE2DQ9UEU5 116 aa11.18□□□□□ -0.62
LITAF-201ENST00000339430 KPRPQ5T749 579 aaPredicted RBP11.17□□□□□ -0.62
LITAF-201ENST00000339430 Q8NAQ8 132 aa11.17□□□□□ -0.62
LITAF-201ENST00000339430 C22orf24Q9Y442 160 aa11.17□□□□□ -0.62
LITAF-201ENST00000339430 CHCHD10Q8WYQ3 142 aaPredicted RBP11.17□□□□□ -0.62
LITAF-201ENST00000339430 RETNQ9HD89 108 aa11.17□□□□□ -0.62
LITAF-201ENST00000339430 ATP5G1P05496 136 aa11.16□□□□□ -0.62
LITAF-201ENST00000339430 REG3AQ06141 175 aa11.16□□□□□ -0.62
LITAF-201ENST00000339430 K7EIL1 84 aa11.16□□□□□ -0.62
LITAF-201ENST00000339430 MIFP14174 115 aa11.15□□□□□ -0.62
LITAF-201ENST00000339430 CD164L2Q6UWJ8 174 aa11.14□□□□□ -0.63
LITAF-201ENST00000339430 FAM240AA0A1B0GVK7 77 aa11.14□□□□□ -0.63
LITAF-201ENST00000339430 MALP21145 153 aa11.14□□□□□ -0.63
LITAF-201ENST00000339430 PRR3P79522 188 aaKnown RBP11.14□□□□□ -0.63
LITAF-201ENST00000339430 ANAPC13Q9BS18 74 aa11.14□□□□□ -0.63
LITAF-201ENST00000339430 C9orf116Q5BN46 136 aaPredicted RBP11.13□□□□□ -0.63
LITAF-201ENST00000339430 DNAL4O96015 105 aa11.13□□□□□ -0.63
LITAF-201ENST00000339430 KIAA0087Q14695 138 aa11.13□□□□□ -0.63
LITAF-201ENST00000339430 CFAP161Q6P656 301 aa11.13□□□□□ -0.63
LITAF-201ENST00000339430 SPART-AS1P0CW21 52 aa11.12□□□□□ -0.63
LITAF-201ENST00000339430 LECT2O14960 151 aa11.11□□□□□ -0.63
LITAF-201ENST00000339430 LINC01561Q8N1V8 128 aa11.1□□□□□ -0.63
LITAF-201ENST00000339430 MRAPQ8TCY5 172 aa11.1□□□□□ -0.63
LITAF-201ENST00000339430 TENM3Q9P273 2699 aa11.1□□□□□ -0.63
LITAF-201ENST00000339430 MRPL23Q16540 153 aaKnown RBP11.1□□□□□ -0.63
LITAF-201ENST00000339430 H0YGX0 51 aa11.09□□□□□ -0.63
LITAF-201ENST00000339430 SLPIP03973 132 aa11.09□□□□□ -0.63
LITAF-201ENST00000339430 C9orf129Q5T035 196 aaKnown RBP11.09□□□□□ -0.63
LITAF-201ENST00000339430 LINC00526Q96FQ7 95 aa11.09□□□□□ -0.63
LITAF-201ENST00000339430 NDUFV3P56181 108 aaKnown RBP11.09□□□□□ -0.63
LITAF-201ENST00000339430 C6orf223Q8N319 242 aa11.08□□□□□ -0.64
LITAF-201ENST00000339430 SMCR5Q8TEV8 140 aa11.08□□□□□ -0.64
LITAF-201ENST00000339430 KRTAP21-3Q3LHN1 58 aa11.08□□□□□ -0.64
LITAF-201ENST00000339430 NHLRC4P0CG21 123 aaPredicted RBP11.07□□□□□ -0.64
LITAF-201ENST00000339430 Q6Q795 121 aa11.07□□□□□ -0.64
LITAF-201ENST00000339430 KLK12Q9UKR0 248 aa11.07□□□□□ -0.64
LITAF-201ENST00000339430 DNHD1Q96M86 4753 aa11.07□□□□□ -0.64
LITAF-201ENST00000339430 LELP1Q5T871 98 aa11.06□□□□□ -0.64
LITAF-201ENST00000339430 GAGE2AQ6NT46 116 aa11.06□□□□□ -0.64
LITAF-201ENST00000339430 ACYP1P07311 99 aa11.06□□□□□ -0.64
LITAF-201ENST00000339430 CXCL5P42830 114 aa11.05□□□□□ -0.64
LITAF-201ENST00000339430 C10orf25Q5T742 122 aa11.05□□□□□ -0.64
LITAF-201ENST00000339430 NANOS2P60321 138 aaKnown RBP11.05□□□□□ -0.64
LITAF-201ENST00000339430 NCR3O14931 201 aa11.04□□□□□ -0.64
LITAF-201ENST00000339430 INAFM2P0DMQ5 153 aa11.04□□□□□ -0.64
LITAF-201ENST00000339430 COX17Q14061 63 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms