RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 FAM236DA0A1B0GTK5 79 aa8.77□□□□□ -1.01
LIMK1-201ENST00000336180 FAM236CP0DP71 79 aa8.77□□□□□ -1.01
LIMK1-201ENST00000336180 PSMB2P49721 201 aa8.77□□□□□ -1.01
LIMK1-201ENST00000336180 TAL2Q16559 108 aa8.77□□□□□ -1.01
LIMK1-201ENST00000336180 Q1RN00 199 aa8.77□□□□□ -1.01
LIMK1-201ENST00000336180 TEN1Q86WV5 123 aa8.77□□□□□ -1.01
LIMK1-201ENST00000336180 APOC4P55056 127 aa8.76□□□□□ -1.01
LIMK1-201ENST00000336180 MALP21145 153 aa8.76□□□□□ -1.01
LIMK1-201ENST00000336180 LINC00336Q6ZUF6 198 aa8.76□□□□□ -1.01
LIMK1-201ENST00000336180 SMIM1B2RUZ4 78 aa8.76□□□□□ -1.01
LIMK1-201ENST00000336180 Q5XG85 94 aa8.76□□□□□ -1.01
LIMK1-201ENST00000336180 Q8NAQ8 132 aa8.75□□□□□ -1.01
LIMK1-201ENST00000336180 OXTP01178 125 aa8.75□□□□□ -1.01
LIMK1-201ENST00000336180 SCGB1C2P0DMR2 95 aa8.75□□□□□ -1.01
LIMK1-201ENST00000336180 C15orf53Q8NAA6 179 aa8.75□□□□□ -1.01
LIMK1-201ENST00000336180 PRO0255Q9UI72 69 aa8.75□□□□□ -1.01
LIMK1-201ENST00000336180 LITAFQ99732 161 aa8.75□□□□□ -1.01
LIMK1-201ENST00000336180 CMYA5Q8N3K9 4069 aa8.74□□□□□ -1.01
LIMK1-201ENST00000336180 Q6Q795 121 aa8.74□□□□□ -1.01
LIMK1-201ENST00000336180 WFDC9Q8NEX5 89 aa8.74□□□□□ -1.01
LIMK1-201ENST00000336180 LINC00526Q96FQ7 95 aa8.73□□□□□ -1.01
LIMK1-201ENST00000336180 ANKRD29Q8N6D5 301 aa8.73□□□□□ -1.01
LIMK1-201ENST00000336180 A0A0U1RQV1 116 aa8.73□□□□□ -1.01
LIMK1-201ENST00000336180 TIRAPP58753 221 aa8.72□□□□□ -1.01
LIMK1-201ENST00000336180 RPS28P62857 69 aaKnown RBP8.72□□□□□ -1.01
LIMK1-201ENST00000336180 LINC00269Q8N2A0 174 aa8.72□□□□□ -1.01
LIMK1-201ENST00000336180 C2orf48Q96LS8 159 aa8.72□□□□□ -1.01
LIMK1-201ENST00000336180 PFN2P35080 140 aa8.72□□□□□ -1.01
LIMK1-201ENST00000336180 ANGP03950 147 aaKnown RBP8.71□□□□□ -1.01
LIMK1-201ENST00000336180 DSCR8Q96T75 97 aa8.71□□□□□ -1.02
LIMK1-201ENST00000336180 PRO1854Q9UHT4 67 aa8.71□□□□□ -1.02
LIMK1-201ENST00000336180 C2orf82Q6UX34 121 aa8.71□□□□□ -1.02
LIMK1-201ENST00000336180 C3orf22Q8N5N4 141 aa8.71□□□□□ -1.02
LIMK1-201ENST00000336180 GAGE2AQ6NT46 116 aa8.7□□□□□ -1.02
LIMK1-201ENST00000336180 TCL1BO95988 128 aa8.7□□□□□ -1.02
LIMK1-201ENST00000336180 ATP5G1P05496 136 aa8.7□□□□□ -1.02
LIMK1-201ENST00000336180 LINC00612Q8N6U2 182 aa8.7□□□□□ -1.02
LIMK1-201ENST00000336180 IGHV3-33P01772 117 aa8.69□□□□□ -1.02
LIMK1-201ENST00000336180 SOSTDC1Q6X4U4 206 aa8.69□□□□□ -1.02
LIMK1-201ENST00000336180 LINC00959A0A1B0GUT2 108 aa8.69□□□□□ -1.02
LIMK1-201ENST00000336180 SPART-AS1P0CW21 52 aa8.69□□□□□ -1.02
LIMK1-201ENST00000336180 C1orf195Q5TG92 126 aa8.69□□□□□ -1.02
LIMK1-201ENST00000336180 Q6ZTC4 211 aa8.69□□□□□ -1.02
LIMK1-201ENST00000336180 IGLV5-45A0A087WSX0 123 aa8.68□□□□□ -1.02
LIMK1-201ENST00000336180 LYRM9A8MSI8 78 aa8.68□□□□□ -1.02
LIMK1-201ENST00000336180 MIAQ16674 131 aa8.68□□□□□ -1.02
LIMK1-201ENST00000336180 LYRM7Q5U5X0 104 aa8.68□□□□□ -1.02
LIMK1-201ENST00000336180 NANOS2P60321 138 aaKnown RBP8.67□□□□□ -1.02
LIMK1-201ENST00000336180 DEFB121Q5J5C9 76 aa8.67□□□□□ -1.02
LIMK1-201ENST00000336180 DPH3Q96FX2 82 aa8.67□□□□□ -1.02
LIMK1-201ENST00000336180 IGLV5-39A0A0G2JS06 123 aa8.67□□□□□ -1.02
LIMK1-201ENST00000336180 NDUFA1O15239 70 aa8.67□□□□□ -1.02
LIMK1-201ENST00000336180 A0A0J9YWU9 116 aa8.66□□□□□ -1.02
LIMK1-201ENST00000336180 MIFP14174 115 aa8.66□□□□□ -1.02
LIMK1-201ENST00000336180 LINC00158P58513 81 aa8.66□□□□□ -1.02
LIMK1-201ENST00000336180 CLEC2BQ92478 149 aa8.66□□□□□ -1.02
LIMK1-201ENST00000336180 COX7B2Q8TF08 81 aa8.66□□□□□ -1.02
LIMK1-201ENST00000336180 KLK12Q9UKR0 248 aa8.66□□□□□ -1.02
LIMK1-201ENST00000336180 IGHV3OR16-9A0A0B4J2B5 98 aa8.65□□□□□ -1.02
LIMK1-201ENST00000336180 RPL13AP40429 203 aaKnown RBP8.65□□□□□ -1.02
LIMK1-201ENST00000336180 C9orf116Q5BN46 136 aaPredicted RBP8.65□□□□□ -1.02
LIMK1-201ENST00000336180 MIR7-3HGQ8N6C7 128 aa8.65□□□□□ -1.02
LIMK1-201ENST00000336180 LINC00308Q8TCZ7 52 aa8.65□□□□□ -1.02
LIMK1-201ENST00000336180 CYSTM1Q9H1C7 97 aa8.65□□□□□ -1.02
LIMK1-201ENST00000336180 UQCRQO14949 82 aa8.65□□□□□ -1.03
LIMK1-201ENST00000336180 TRIAP1O43715 76 aa8.65□□□□□ -1.03
LIMK1-201ENST00000336180 hADV29S1A0JD25 119 aa8.64□□□□□ -1.03
LIMK1-201ENST00000336180 C6orf226Q5I0X4 101 aa8.64□□□□□ -1.03
LIMK1-201ENST00000336180 ZNF561-AS1K7EIQ3 104 aa8.63□□□□□ -1.03
LIMK1-201ENST00000336180 CIRBPQ14011 172 aaKnown RBP8.63□□□□□ -1.03
LIMK1-201ENST00000336180 REG3AQ06141 175 aa8.62□□□□□ -1.03
LIMK1-201ENST00000336180 WFDC10BQ8IUB3 73 aa8.62□□□□□ -1.03
LIMK1-201ENST00000336180 C6orf223Q8N319 242 aa8.62□□□□□ -1.03
LIMK1-201ENST00000336180 TRAV8-4A0A0B4J246 113 aa8.62□□□□□ -1.03
LIMK1-201ENST00000336180 SS18Q15532 418 aa8.62□□□□□ -1.03
LIMK1-201ENST00000336180 CHCHD10Q8WYQ3 142 aaPredicted RBP8.62□□□□□ -1.03
LIMK1-201ENST00000336180 PRR3P79522 188 aaKnown RBP8.61□□□□□ -1.03
LIMK1-201ENST00000336180 SPANXDQ9BXN6 97 aa8.61□□□□□ -1.03
LIMK1-201ENST00000336180 SPANXCQ9NY87 97 aa8.61□□□□□ -1.03
LIMK1-201ENST00000336180 STAB2Q8WWQ8 2551 aa8.61□□□□□ -1.03
LIMK1-201ENST00000336180 KPRPQ5T749 579 aaPredicted RBP8.61□□□□□ -1.03
LIMK1-201ENST00000336180 UBE2WQ96B02 151 aa8.61□□□□□ -1.03
LIMK1-201ENST00000336180 NTN5Q8WTR8 489 aaPredicted RBP8.6□□□□□ -1.03
LIMK1-201ENST00000336180 ICOSQ9Y6W8 199 aa8.6□□□□□ -1.03
LIMK1-201ENST00000336180 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.59□□□□□ -1.03
LIMK1-201ENST00000336180 A0A087WZ39 114 aa8.59□□□□□ -1.03
LIMK1-201ENST00000336180 A0A0B4J2C4 111 aa8.59□□□□□ -1.03
LIMK1-201ENST00000336180 H7C423 109 aa8.59□□□□□ -1.03
LIMK1-201ENST00000336180 TENM2Q9NT68 2774 aa8.58□□□□□ -1.04
LIMK1-201ENST00000336180 TEX49A0A1B0GTD5 131 aa8.58□□□□□ -1.04
LIMK1-201ENST00000336180 TRACP01848 142 aa8.58□□□□□ -1.04
LIMK1-201ENST00000336180 C4orf48Q5BLP8 95 aa8.58□□□□□ -1.04
LIMK1-201ENST00000336180 LYPD5Q6UWN5 251 aa8.58□□□□□ -1.04
LIMK1-201ENST00000336180 COL7A1Q02388 2944 aa8.58□□□□□ -1.04
LIMK1-201ENST00000336180 SLC25A20O43772 301 aa8.58□□□□□ -1.04
LIMK1-201ENST00000336180 FAM19A3Q7Z5A8 133 aa8.57□□□□□ -1.04
LIMK1-201ENST00000336180 LINC01561Q8N1V8 128 aa8.57□□□□□ -1.04
LIMK1-201ENST00000336180 MDFIQ99750 246 aa8.57□□□□□ -1.04
LIMK1-201ENST00000336180 C10orf25Q5T742 122 aa8.56□□□□□ -1.04
LIMK1-201ENST00000336180 HIGD2BQ4VC39 106 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms