RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 ERG28Q9UKR5 140 aa15.77■□□□□ 0.12
TSEN54-201ENST00000333213 NUPR2A6NF83 97 aa15.76■□□□□ 0.11
TSEN54-201ENST00000333213 CDKN2A-AS1Q9UH64 79 aa15.76■□□□□ 0.11
TSEN54-201ENST00000333213 SCGB1C2P0DMR2 95 aa15.76■□□□□ 0.11
TSEN54-201ENST00000333213 CCL18P55774 89 aa15.76■□□□□ 0.11
TSEN54-201ENST00000333213 MUSTN1Q8IVN3 82 aa15.76■□□□□ 0.11
TSEN54-201ENST00000333213 KLK12Q9UKR0 248 aa15.76■□□□□ 0.11
TSEN54-201ENST00000333213 IGLV5-45A0A087WSX0 123 aa15.75■□□□□ 0.11
TSEN54-201ENST00000333213 IGHV1-58A0A0C4DH39 117 aa15.75■□□□□ 0.11
TSEN54-201ENST00000333213 REG3AQ06141 175 aa15.75■□□□□ 0.11
TSEN54-201ENST00000333213 SPANXDQ9BXN6 97 aa15.74■□□□□ 0.11
TSEN54-201ENST00000333213 GEMIN7Q9H840 131 aaKnown RBP15.74■□□□□ 0.11
TSEN54-201ENST00000333213 SPANXCQ9NY87 97 aa15.74■□□□□ 0.11
TSEN54-201ENST00000333213 PRR34Q9NV39 138 aa15.74■□□□□ 0.11
TSEN54-201ENST00000333213 EIF4EBP3O60516 100 aaPredicted RBP15.73■□□□□ 0.11
TSEN54-201ENST00000333213 HERVK_113P63121 156 aa15.73■□□□□ 0.11
TSEN54-201ENST00000333213 LINC01556Q5JQF7 62 aa15.73■□□□□ 0.11
TSEN54-201ENST00000333213 SFTA2Q6UW10 78 aa15.73■□□□□ 0.11
TSEN54-201ENST00000333213 CDIP1Q9H305 208 aa15.73■□□□□ 0.11
TSEN54-201ENST00000333213 ENHOQ6UWT2 76 aa15.72■□□□□ 0.11
TSEN54-201ENST00000333213 CARD19Q96LW7 228 aa15.72■□□□□ 0.11
TSEN54-201ENST00000333213 LITAFQ99732 161 aa15.72■□□□□ 0.11
TSEN54-201ENST00000333213 KLK5Q9Y337 293 aaPredicted RBP15.72■□□□□ 0.11
TSEN54-201ENST00000333213 TRBV30A0A0K0K1B3 111 aa15.71■□□□□ 0.11
TSEN54-201ENST00000333213 DNAH10OSP0CZ25 163 aa15.71■□□□□ 0.11
TSEN54-201ENST00000333213 ZFAND6Q6FIF0 208 aa15.71■□□□□ 0.11
TSEN54-201ENST00000333213 UPK3BQ9BT76 320 aa15.71■□□□□ 0.11
TSEN54-201ENST00000333213 IGHV3-64A0A075B6Q5 118 aa15.7■□□□□ 0.1
TSEN54-201ENST00000333213 TRAV8-3A0A0A6YYJ7 113 aa15.7■□□□□ 0.1
TSEN54-201ENST00000333213 IGHV3OR16-9A0A0B4J2B5 98 aa15.7■□□□□ 0.1
TSEN54-201ENST00000333213 A0A1B0GV72 72 aa15.7■□□□□ 0.1
TSEN54-201ENST00000333213 TIMM17BO60830 172 aa15.7■□□□□ 0.1
TSEN54-201ENST00000333213 IGLV10-54A0A075B6I4 117 aa15.69■□□□□ 0.1
TSEN54-201ENST00000333213 SLC25A20O43772 301 aa15.68■□□□□ 0.1
TSEN54-201ENST00000333213 SPINK8P0C7L1 97 aa15.68■□□□□ 0.1
TSEN54-201ENST00000333213 XCL1P47992 114 aa15.68■□□□□ 0.1
TSEN54-201ENST00000333213 ATXN8Q156A1 80 aa15.68■□□□□ 0.1
TSEN54-201ENST00000333213 SS18Q15532 418 aa15.68■□□□□ 0.1
TSEN54-201ENST00000333213 ANKRD29Q8N6D5 301 aa15.68■□□□□ 0.1
TSEN54-201ENST00000333213 NDUFA12Q9UI09 145 aa15.68■□□□□ 0.1
TSEN54-201ENST00000333213 UBE2WQ96B02 151 aa15.66■□□□□ 0.1
TSEN54-201ENST00000333213 VPS13DQ5THJ4 4388 aa15.66■□□□□ 0.1
TSEN54-201ENST00000333213 MIAQ16674 131 aa15.66■□□□□ 0.1
TSEN54-201ENST00000333213 CHCHD10Q8WYQ3 142 aaPredicted RBP15.66■□□□□ 0.1
TSEN54-201ENST00000333213 IFITM1P13164 125 aa15.65■□□□□ 0.1
TSEN54-201ENST00000333213 Q9H8V8 135 aa15.65■□□□□ 0.1
TSEN54-201ENST00000333213 SMIM1B2RUZ4 78 aa15.64■□□□□ 0.09
TSEN54-201ENST00000333213 MUC7Q8TAX7 377 aa15.64■□□□□ 0.09
TSEN54-201ENST00000333213 C9JAW5 83 aa15.64■□□□□ 0.09
TSEN54-201ENST00000333213 C5orf38Q86SI9 138 aa15.64■□□□□ 0.09
TSEN54-201ENST00000333213 Q1RN00 199 aa15.62■□□□□ 0.09
TSEN54-201ENST00000333213 LINC01620Q4KN68 170 aa15.62■□□□□ 0.09
TSEN54-201ENST00000333213 A0A087WZ39 114 aa15.62■□□□□ 0.09
TSEN54-201ENST00000333213 CRPP02741 224 aa15.62■□□□□ 0.09
TSEN54-201ENST00000333213 CD164L2Q6UWJ8 174 aa15.62■□□□□ 0.09
TSEN54-201ENST00000333213 IGLV5-39A0A0G2JS06 123 aa15.61■□□□□ 0.09
TSEN54-201ENST00000333213 WWC2-AS2Q96NR7 200 aa15.61■□□□□ 0.09
TSEN54-201ENST00000333213 TRBV10-2A0A0K0K1G8 114 aa15.6■□□□□ 0.09
TSEN54-201ENST00000333213 RPL13AP40429 203 aaKnown RBP15.6■□□□□ 0.09
TSEN54-201ENST00000333213 NDUFA1O15239 70 aa15.59■□□□□ 0.09
TSEN54-201ENST00000333213 UBE2DNLQ8IWF7 75 aa15.59■□□□□ 0.09
TSEN54-201ENST00000333213 TRIAP1O43715 76 aa15.58■□□□□ 0.09
TSEN54-201ENST00000333213 COX6CP09669 75 aa15.58■□□□□ 0.09
TSEN54-201ENST00000333213 ADAMTSL4-AS1Q5T5F5 129 aa15.58■□□□□ 0.09
TSEN54-201ENST00000333213 KRTAP26-1Q6PEX3 210 aa15.58■□□□□ 0.09
TSEN54-201ENST00000333213 XGP55808 180 aa15.58■□□□□ 0.08
TSEN54-201ENST00000333213 TRAV8-4A0A0B4J246 113 aa15.57■□□□□ 0.08
TSEN54-201ENST00000333213 H7C2G1 150 aa15.57■□□□□ 0.08
TSEN54-201ENST00000333213 PRSS2P07478 247 aa15.57■□□□□ 0.08
TSEN54-201ENST00000333213 KRTAP1-5Q9BYS1 174 aa15.57■□□□□ 0.08
TSEN54-201ENST00000333213 DNAH10Q8IVF4 4471 aa15.57■□□□□ 0.08
TSEN54-201ENST00000333213 IBA57-AS1B1ANH7 110 aa15.56■□□□□ 0.08
TSEN54-201ENST00000333213 CKS1BP61024 79 aa15.56■□□□□ 0.08
TSEN54-201ENST00000333213 MT-ATP8P03928 68 aa15.56■□□□□ 0.08
TSEN54-201ENST00000333213 H3BT86 120 aa15.55■□□□□ 0.08
TSEN54-201ENST00000333213 CIRBPQ14011 172 aaKnown RBP15.54■□□□□ 0.08
TSEN54-201ENST00000333213 COPS9Q8WXC6 57 aa15.54■□□□□ 0.08
TSEN54-201ENST00000333213 PPDPFQ9H3Y8 114 aa15.54■□□□□ 0.08
TSEN54-201ENST00000333213 COX7A2LO14548 114 aa15.53■□□□□ 0.08
TSEN54-201ENST00000333213 Q9HAA7 133 aa15.53■□□□□ 0.08
TSEN54-201ENST00000333213 KMT2AQ03164 3969 aa15.52■□□□□ 0.07
TSEN54-201ENST00000333213 NTN5Q8WTR8 489 aaPredicted RBP15.51■□□□□ 0.07
TSEN54-201ENST00000333213 LINC01561Q8N1V8 128 aa15.51■□□□□ 0.07
TSEN54-201ENST00000333213 IGKV2D-24A0A075B6R9 120 aa15.5■□□□□ 0.07
TSEN54-201ENST00000333213 CASC10Q5T4H9 136 aa15.5■□□□□ 0.07
TSEN54-201ENST00000333213 C1orf43Q9BWL3 253 aa15.5■□□□□ 0.07
TSEN54-201ENST00000333213 LST1O00453 97 aa15.49■□□□□ 0.07
TSEN54-201ENST00000333213 TOMM7Q9P0U1 55 aa15.49■□□□□ 0.07
TSEN54-201ENST00000333213 COX7B2Q8TF08 81 aa15.48■□□□□ 0.07
TSEN54-201ENST00000333213 MALP21145 153 aa15.47■□□□□ 0.07
TSEN54-201ENST00000333213 C2orf82Q6UX34 121 aa15.47■□□□□ 0.07
TSEN54-201ENST00000333213 KIAA0087Q14695 138 aa15.46■□□□□ 0.07
TSEN54-201ENST00000333213 ZNF625Q96I27 306 aaPredicted RBP15.46■□□□□ 0.07
TSEN54-201ENST00000333213 LINC00308Q8TCZ7 52 aa15.45■□□□□ 0.06
TSEN54-201ENST00000333213 HERV-K104P63124 156 aa15.44■□□□□ 0.06
TSEN54-201ENST00000333213 Q6Q795 121 aa15.43■□□□□ 0.06
TSEN54-201ENST00000333213 Q8IZM0 81 aa15.43■□□□□ 0.06
TSEN54-201ENST00000333213 NBDYA0A0U1RRE5 68 aa15.42■□□□□ 0.06
TSEN54-201ENST00000333213 FAM240AA0A1B0GVK7 77 aa15.42■□□□□ 0.06
TSEN54-201ENST00000333213 LINC00526Q96FQ7 95 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms